Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G06470 - ( phosphate translocator-related )

8 Proteins interacs with AT1G06470
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT2G30710

Predicted

interologs mapping

Phenotypic Enhancement

FSW = 0.0978

Unknown

RABGAP/TBC DOMAIN-CONTAINING PROTEIN
AT5G17770

Predicted

interologs mapping

Phenotypic Suppression

FSW = 0.0811

Unknown

ATCBR (ARABIDOPSIS THALIANA NADHCYTOCHROME B5 REDUCTASE 1) CYTOCHROME-B5 REDUCTASE
AT5G18280

Predicted

Phenotypic Enhancement

FSW = 0.3141

Unknown

ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) ATPASE/ NUCLEOTIDE DIPHOSPHATASE
AT1G57600

Predicted

interologs mapping

Phenotypic Suppression

FSW = 0.1412

Unknown

MEMBRANE BOUND O-ACYL TRANSFERASE (MBOAT) FAMILY PROTEIN
AT1G80500

Predicted

Phenotypic Enhancement

FSW = 0.0484

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN TRANSPORT ER TO GOLGI VESICLE-MEDIATED TRANSPORT LOCATED IN INTRACELLULAR EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SEDLIN (INTERPROIPR006722) LONGIN-LIKE (INTERPROIPR011012) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G209301) HAS 437 BLAST HITS TO 435 PROTEINS IN 138 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 248 FUNGI - 75 PLANTS - 53 VIRUSES - 0 OTHER EUKARYOTES - 61 (SOURCE NCBI BLINK)
AT3G22480

Predicted

interologs mapping

Phenotypic Suppression

FSW = 0.0098

Unknown

PREFOLDIN-RELATED KE2 FAMILY PROTEIN
AT5G42000

Predicted

Phenotypic Enhancement

FSW = 0.0417

Unknown

ORMDL FAMILY PROTEIN
AT3G04080

Predicted

interologs mapping

FSW = 0.2232

Unknown

ATAPY1 (APYRASE 1) ATPASE/ CALMODULIN BINDING / NUCLEOTIDE DIPHOSPHATASE

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454