Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G16570 - ( glycosyl transferase family 1 protein )

27 Proteins interacs with AT1G16570
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT5G66680

Predicted

two hybrid

interaction prediction

FSW = 0.0411

Unknown

DGL1 DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE-PROTEIN GLYCOTRANSFERASE
AT2G38940

Predicted

interaction prediction

FSW = 0.0611

Unknown

ATPT2 (ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G07420

Predicted

two hybrid

interaction prediction

FSW = 0.1307

Unknown

SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1) 4-ALPHA-METHYL-DELTA7-STEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE
AT3G55360

Predicted

two hybrid

interaction prediction

FSW = 0.2361

Unknown

CER10 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE/ FATTY ACID ELONGASE/ TRANS-2-ENOYL-COA REDUCTASE (NADPH)
AT3G54700

Predicted

two hybrid

FSW = 0.0683

Unknown

CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G32090

Predicted

two hybrid

FSW = 0.0247

Unknown

EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT1G67730

Predicted

two hybrid

FSW = 0.3078

Unknown

YBR159 KETOREDUCTASE/ OXIDOREDUCTASE
AT3G07790

Predicted

two hybrid

two hybrid

FSW = 0.0178

Unknown

DGCR14-RELATED
AT5G55130

Predicted

two hybrid

two hybrid

FSW = 0.0140

Unknown

CNX5 (CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 5) MO-MOLYBDOPTERIN COFACTOR SULFURASE
AT1G08750

Predicted

two hybrid

interaction prediction

FSW = 0.1548

Unknown

GPI-ANCHOR TRANSAMIDASE PUTATIVE
AT2G34980

Predicted

two hybrid

interaction prediction

FSW = 0.1443

Unknown

SETH1 PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE/ TRANSFERASE
AT4G32530

Predicted

two hybrid

interaction prediction

FSW = 0.1210

Unknown

VACUOLAR ATP SYNTHASE PUTATIVE / V-ATPASE PUTATIVE
AT4G39830

Predicted

two hybrid

interaction prediction

FSW = 0.1059

Unknown

L-ASCORBATE OXIDASE PUTATIVE
AT1G78800

Predicted

Affinity Capture-Western

FSW = 0.0595

Unknown

GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN
AT2G39770

Predicted

interologs mapping

interologs mapping

interologs mapping

interaction prediction

FSW = 0.0124

Unknown

CYT1 (CYTOKINESIS DEFECTIVE 1) MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE/ NUCLEOTIDYLTRANSFERASE
AT2G40190

Predicted

Affinity Capture-Western

FSW = 0.2118

Unknown

GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN
AT2G41880

Predicted

Phenotypic Enhancement

FSW = 0.0334

Unknown

GK-1 (GUANYLATE KINASE 1) GUANYLATE KINASE
AT3G06460

Predicted

two hybrid

interaction prediction

FSW = 0.2029

Unknown

GNS1/SUR4 MEMBRANE FAMILY PROTEIN
AT5G17860

Predicted

two hybrid

FSW = 0.0260

Unknown

CAX7 (CALCIUM EXCHANGER 7) CALCIUMSODIUM ANTIPORTER/ CATIONCATION ANTIPORTER
AT2G25610

Predicted

two hybrid

FSW = 0.1694

Unknown

H+-TRANSPORTING TWO-SECTOR ATPASE C SUBUNIT FAMILY PROTEIN
AT2G22425

Predicted

two hybrid

FSW = 0.1191

Unknown

PEPTIDASE
AT1G31820

Predicted

two hybrid

interaction prediction

FSW = 0.1109

Unknown

AMINO ACID PERMEASE FAMILY PROTEIN
AT1G20860

Predicted

two hybrid

FSW = 0.0870

Unknown

PHOSPHATE TRANSPORTER FAMILY PROTEIN
AT1G54115

Predicted

two hybrid

FSW = 0.0945

Unknown

CCX4 (CATION CALCIUM EXCHANGER 4) CATIONCATION ANTIPORTER
AT1G24470

Predicted

two hybrid

FSW = 0.3834

Unknown

SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN
AT1G10090

Predicted

two hybrid

FSW = 0.0151

Unknown

UNKNOWN PROTEIN
AT4G40042

Predicted

interaction prediction

FSW = 0.1377

Unknown

PEPTIDASE

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Proteins

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Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454