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AT1G17530 - ( ATTIM23-1 (TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23) P-P-bond-hydrolysis-driven protein transmembrane transporter )

23 Proteins interacs with AT1G17530

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT5G67500	Predicted Co-purification	FSW = 0.0627	Class C: mitochondrion	VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2) VOLTAGE-GATED ANION CHANNEL
AT2G33210	Predicted Co-purification	FSW = 0.0258	Class C: mitochondrion	HSP60-2 (HEAT SHOCK PROTEIN 60-2) ATP BINDING
AT5G09590	Predicted Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western synthetic growth defect Affinity Capture-MS Co-purification interaction prediction	FSW = 0.0207	Class C: mitochondrion	MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT3G23990	Predicted Co-purification	FSW = 0.0331	Class C: mitochondrion	HSP60 (HEAT SHOCK PROTEIN 60) ATP BINDING
AT4G37910	Predicted Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Co-purification synthetic growth defect	FSW = 0.0472	Class C: mitochondrion	MTHSC70-1 (MITOCHONDRIAL HEAT SHOCK PROTEIN 70-1) ATP BINDING
AT3G59280	Predicted Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Co-purification	FSW = 0.1171	Class C: mitochondrion	TXR1 (THAXTOMIN A RESISTANT 1)
AT2G29530	Predicted interaction prediction	FSW = 0.1296	Class C: mitochondrion	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE (TIM10)
AT3G04800	Predicted Phylogenetic profile method Co-expression	FSW = 0.0684	Class C: mitochondrion	ATTIM23-3 P-P-BOND-HYDROLYSIS-DRIVEN PROTEIN TRANSMEMBRANE TRANSPORTER/ PROTEIN TRANSPORTER
AT3G46560	Predicted interaction prediction	FSW = 0.0683	Class C: mitochondrion	TIM9 P-P-BOND-HYDROLYSIS-DRIVEN PROTEIN TRANSMEMBRANE TRANSPORTER
AT2G20510	Predicted interaction prediction Reconstituted Complex Co-purification Co-purification co-fractionation Co-fractionation Co-fractionation Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Co-purification Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western co-fractionation Co-fractionation Synthetic Lethality Affinity Capture-MS Reconstituted Complex Co-purification interologs mapping interaction prediction	FSW = 0.1753	Class C: mitochondrion	ATTIM44-1 PROTEIN-TRANSMEMBRANE TRANSPORTING ATPASE
AT1G18320	Predicted Affinity Capture-Western	FSW = 0.0645	Class C: mitochondrion	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM17/TIM22/TIM23 FAMILY PROTEIN
AT1G55900	Predicted two hybrid two hybrid Reconstituted Complex Co-purification co-fractionation Co-fractionation Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western two hybrid Reconstituted Complex co-fractionation Affinity Capture-MS Co-purification	FSW = 0.3161	Class C: mitochondrion	TIM50
AT1G20350	Predicted interaction prediction Reconstituted Complex interologs mapping interologs mapping Co-purification Co-purification co-fractionation Co-fractionation Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS interologs mapping interologs mapping Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Co-purification Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Reconstituted Complex Synthetic Lethality Affinity Capture-MS Co-purification co-fractionation Co-fractionation interologs mapping interaction prediction	FSW = 0.4196	Class C: mitochondrion	ATTIM17-1 P-P-BOND-HYDROLYSIS-DRIVEN PROTEIN TRANSMEMBRANE TRANSPORTER/ PROTEIN TRANSPORTER
AT1G50400	Predicted Co-purification Co-purification	FSW = 0.2518	Class C: mitochondrion	PORIN FAMILY PROTEIN
AT2G26140	Predicted Affinity Capture-Western	FSW = 0.0833	Unknown	FTSH4 (FTSH PROTEASE 4) ATP-DEPENDENT PEPTIDASE/ ATPASE/ METALLOPEPTIDASE
AT4G18360	Predicted interaction prediction	FSW = 0.1910	Unknown	(S)-2-HYDROXY-ACID OXIDASE PEROXISOMAL PUTATIVE / GLYCOLATE OXIDASE PUTATIVE / SHORT CHAIN ALPHA-HYDROXY ACID OXIDASE PUTATIVE
AT3G14150	Predicted Reconstituted Complex	FSW = 0.1142	Unknown	(S)-2-HYDROXY-ACID OXIDASE PEROXISOMAL PUTATIVE / GLYCOLATE OXIDASE PUTATIVE / SHORT CHAIN ALPHA-HYDROXY ACID OXIDASE PUTATIVE
AT3G14130	Predicted Reconstituted Complex	FSW = 0.1142	Unknown	(S)-2-HYDROXY-ACID OXIDASE PEROXISOMAL PUTATIVE / GLYCOLATE OXIDASE PUTATIVE / SHORT CHAIN ALPHA-HYDROXY ACID OXIDASE PUTATIVE
AT2G46470	Predicted Reconstituted Complex	FSW = 0.0635	Unknown	OXA1L (INNER MEMBRANE PROTEIN OXA1-LIKE)
AT2G35795	Predicted Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western	FSW = 0.1910	Unknown	DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT4G26780	Predicted Co-purification	FSW = 0.1043	Unknown	AR192 ADENYL-NUCLEOTIDE EXCHANGE FACTOR/ CHAPERONE BINDING / PROTEIN BINDING / PROTEIN HOMODIMERIZATION
AT4G30480	Predicted co-fractionation Co-fractionation co-fractionation Co-fractionation	FSW = 0.1112	Unknown	TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN
AT1G10350	Predicted interologs mapping	FSW = 0.0121	Unknown	DNAJ HEAT SHOCK PROTEIN PUTATIVE

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

AtPIN will be upgraded. Please send your suggestions here

AT1G17530 - ( ATTIM23-1 (TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23) P-P-bond-hydrolysis-driven protein transmembrane transporter )

Class C:

Class C:

Class C:

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Class C:

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Class C:

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Class C:

Class C:

Class C:

Unknown

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Unknown

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Fasta sequences:

Quick help

FSW

C3

PEP

How to cite