Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G17810 - ( BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN) water channel )

64 Proteins interacs with AT1G17810
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G26520

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.4278

Unknown

TIP2 (TONOPLAST INTRINSIC PROTEIN 2) WATER CHANNEL
AT2G37170

Predicted

Phylogenetic profile method

FSW = 0.4220

Unknown

PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2) WATER CHANNEL
AT5G09590

Predicted

Phenotypic Suppression

FSW = 0.0580

Unknown

MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT3G15710

Predicted

Phenotypic Enhancement

FSW = 0.0397

Unknown

SIGNAL PEPTIDASE PUTATIVE
AT4G35100

Predicted

Phylogenetic profile method

FSW = 0.4004

Unknown

PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3) WATER CHANNEL
AT2G39010

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.4220

Unknown

PIP2E (PLASMA MEMBRANE INTRINSIC PROTEIN 2E) WATER CHANNEL
AT5G37640

Predicted

Affinity Capture-MS

FSW = 0.0126

Unknown

UBQ9 PROTEIN BINDING
AT2G25810

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.4482

Unknown

TIP41 (TONOPLAST INTRINSIC PROTEIN 41) WATER CHANNEL
AT4G21980

Predicted

Phenotypic Suppression

FSW = 0.0166

Unknown

APG8A (AUTOPHAGY 8A) APG8 ACTIVATING ENZYME/ APG8-SPECIFIC PROTEASE/ ATG8 LIGASE
AT2G36830

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.4482

Unknown

GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN) WATER CHANNEL
AT3G22110

Predicted

synthetic growth defect

FSW = 0.0182

Unknown

PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT3G53420

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.3549

Unknown

PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A) WATER CHANNEL
AT2G45960

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.2967

Unknown

PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B) WATER CHANNEL
AT1G01620

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.3536

Unknown

PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C) WATER CHANNEL
AT4G33650

Predicted

Synthetic Lethality

FSW = 0.0090

Unknown

DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP BINDING / GTPASE/ PHOSPHOINOSITIDE BINDING
AT1G23310

Predicted

Affinity Capture-MS

FSW = 0.0290

Unknown

GGT1 (GLUTAMATEGLYOXYLATE AMINOTRANSFERASE) L-ALANINE2-OXOGLUTARATE AMINOTRANSFERASE/ GLYCINE2-OXOGLUTARATE AMINOTRANSFERASE
AT5G19830

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

Phenotypic Enhancement

Phenotypic Enhancement

FSW = 0.0605

Unknown

AMINOACYL-TRNA HYDROLASE
AT1G12900

Predicted

Phenotypic Enhancement

FSW = 0.0115

Unknown

GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2) NAD OR NADH BINDING / BINDING / CATALYTIC/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (PHOSPHORYLATING)/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
AT3G61430

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.1793

Unknown

PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A) WATER CHANNEL
AT4G04340

Predicted

Phenotypic Enhancement

FSW = 0.1011

Unknown

EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT5G40370

Predicted

Affinity Capture-MS

FSW = 0.0113

Unknown

GLUTAREDOXIN PUTATIVE
AT5G60660

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.4004

Unknown

PIP24 (PLASMA MEMBRANE INTRINSIC PROTEIN 24) WATER CHANNEL
AT4G23400

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.4109

Unknown

PIP15 (PLASMA MEMBRANE INTRINSIC PROTEIN 15) WATER CHANNEL
AT4G00430

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.4378

Unknown

PIP14 (PLASMA MEMBRANE INTRINSIC PROTEIN 14) WATER CHANNEL
AT2G16850

Predicted

Phylogenetic profile method

FSW = 0.3737

Unknown

PIP28 (PLASMA MEMBRANE INTRINSIC PROTEIN 28) WATER CHANNEL
AT2G37180

Predicted

Phylogenetic profile method

FSW = 0.4146

Unknown

RD28 (RESPONSIVE TO DESICCATION 28) WATER CHANNEL
AT4G29900

Predicted

Affinity Capture-MS

FSW = 0.0104

Unknown

ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10) CALCIUM-TRANSPORTING ATPASE/ CALMODULIN BINDING
AT4G18910

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.2547

Unknown

NIP12 (NOD26-LIKE INTRINSIC PROTEIN 12) ARSENITE TRANSMEMBRANE TRANSPORTER/ WATER CHANNEL
AT2G37790

Predicted

Synthetic Lethality

FSW = 0.0451

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT3G60180

Predicted

Phenotypic Enhancement

FSW = 0.0423

Unknown

URIDYLATE KINASE PUTATIVE / URIDINE MONOPHOSPHATE KINASE PUTATIVE / UMP KINASE PUTATIVE
AT3G13445

Predicted

Synthetic Lethality

FSW = 0.0154

Unknown

TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT1G21700

Predicted

synthetic growth defect

FSW = 0.0194

Unknown

ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C) DNA BINDING
AT1G77180

Predicted

Phenotypic Enhancement

FSW = 0.0183

Unknown

CHROMATIN PROTEIN FAMILY
AT1G28460

Predicted

Phenotypic Suppression

FSW = 0.0136

Unknown

AGL59 (AGAMOUS-LIKE 59) DNA BINDING / TRANSCRIPTION FACTOR
AT5G66590

Predicted

Affinity Capture-MS

FSW = 0.0325

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT1G73190

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.0515

Unknown

TIP31 WATER CHANNEL
AT3G47440

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.3998

Unknown

TIP51 (TONOPLAST INTRINSIC PROTEIN 51) UREA TRANSMEMBRANE TRANSPORTER/ WATER CHANNEL
AT3G54820

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.2988

Unknown

PIP25 (PLASMA MEMBRANE INTRINSIC PROTEIN 25) WATER CHANNEL
AT4G19030

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.2654

Unknown

NLM1 ARSENITE TRANSMEMBRANE TRANSPORTER/ WATER CHANNEL
AT3G20050

Predicted

Phenotypic Enhancement

FSW = 0.0042

Unknown

ATTCP-1 ATP BINDING / PROTEIN BINDING / UNFOLDED PROTEIN BINDING
AT1G02100

Predicted

Affinity Capture-MS

FSW = 0.0733

Unknown

LEUCINE CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
AT1G13580

Predicted

Phenotypic Enhancement

FSW = 0.0980

Unknown

LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)
AT1G29970

Predicted

Phenotypic Suppression

FSW = 0.0516

Unknown

RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)
AT1G55300

Predicted

Synthetic Lethality

FSW = 0.0306

Unknown

TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT3G09700

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

Phenotypic Enhancement

Phenotypic Enhancement

Phenotypic Enhancement

FSW = 0.1349

Unknown

DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT4G10130

Predicted

Phenotypic Enhancement

FSW = 0.0258

Unknown

DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT5G16980

Predicted

Phenotypic Suppression

FSW = 0.0140

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G58180

Predicted

Phenotypic Enhancement

FSW = 0.0882

Unknown

ATYKT62
AT1G34460Predicted

Affinity Capture-MS

FSW = 0.0160

Unknown

CYCB15 (CYCLIN B15) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT2G42005

Predicted

Phenotypic Enhancement

FSW = 0.0882

Unknown

AMINO ACID TRANSPORTER FAMILY PROTEIN
AT2G47570

Predicted

Phenotypic Enhancement

FSW = 0.0127

Unknown

60S RIBOSOMAL PROTEIN L18 (RPL18A)
AT3G03773

Predicted

Phenotypic Enhancement

FSW = 0.0515

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN CONTAINS INTERPRO DOMAIN/S CS DOMAIN (INTERPROIPR007052) HSP20-LIKE CHAPERONE (INTERPROIPR008978) CS (INTERPROIPR017447) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS GLYCINE-RICH PROTEIN (TAIRAT4G024502) HAS 482 BLAST HITS TO 482 PROTEINS IN 157 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 241 FUNGI - 87 PLANTS - 64 VIRUSES - 0 OTHER EUKARYOTES - 90 (SOURCE NCBI BLINK)
AT3G06483

Predicted

Phenotypic Suppression

FSW = 0.0325

Unknown

PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE
AT3G23000

Predicted

Affinity Capture-MS

FSW = 0.0159

Unknown

CIPK7 (CBL-INTERACTING PROTEIN KINASE 7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT3G27110

Predicted

Affinity Capture-MS

FSW = 0.0066

Unknown

PEPTIDASE M48 FAMILY PROTEIN
AT3G50780

Predicted

Phenotypic Enhancement

FSW = 0.0294

Unknown

INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS PRLI-INTERACTING FACTOR-RELATED (TAIRAT1G638501) HAS 173 BLAST HITS TO 173 PROTEINS IN 14 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 8 FUNGI - 0 PLANTS - 164 VIRUSES - 0 OTHER EUKARYOTES - 1 (SOURCE NCBI BLINK)
AT3G59020

Predicted

Affinity Capture-MS

FSW = 0.0077

Unknown

BINDING / PROTEIN TRANSPORTER
AT3G60245

Predicted

Affinity Capture-MS

FSW = 0.0204

Unknown

60S RIBOSOMAL PROTEIN L37A (RPL37AC)
AT4G04695

Predicted

Affinity Capture-MS

FSW = 0.0741

Unknown

CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G04950

Predicted

Affinity Capture-MS

FSW = 0.0211

Unknown

THIOREDOXIN FAMILY PROTEIN
AT4G26510

Predicted

Affinity Capture-MS

FSW = 0.0263

Unknown

ATP BINDING / KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / URACIL PHOSPHORIBOSYLTRANSFERASE
AT5G14180

Predicted

Synthetic Rescue

FSW = 0.0365

Unknown

MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1) CATALYTIC
AT5G26250

Predicted

Phenotypic Enhancement

FSW = 0.0336

Unknown

SUGAR TRANSPORTER PUTATIVE
AT5G54960

Predicted

Affinity Capture-MS

FSW = 0.0344

Unknown

PDC2 (PYRUVATE DECARBOXYLASE-2) CARBOXY-LYASE/ CATALYTIC/ MAGNESIUM ION BINDING / PYRUVATE DECARBOXYLASE/ THIAMIN PYROPHOSPHATE BINDING

Downloads

Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454