Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G22430 - ( alcohol dehydrogenase putative )

10 Proteins interacs with AT1G22430
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT1G77120

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.7464

Unknown

ADH1 (ALCOHOL DEHYDROGENASE 1) ALCOHOL DEHYDROGENASE
AT5G43940

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.5246

Unknown

HOT5 (SENSITIVE TO HOT TEMPERATURES 5) S-(HYDROXYMETHYL)GLUTATHIONE DEHYDROGENASE/ S-NITROSOGLUTATHIONE REDUCTASE
AT1G64710

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.7794

Unknown

ALCOHOL DEHYDROGENASE PUTATIVE
AT1G32780

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.7794

Unknown

ALCOHOL DEHYDROGENASE PUTATIVE
AT1G22440

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.7794

Unknown

ALCOHOL DEHYDROGENASE PUTATIVE
AT5G42250

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.8154

Unknown

ALCOHOL DEHYDROGENASE PUTATIVE
AT5G24760

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.7794

Unknown

ALCOHOL DEHYDROGENASE PUTATIVE
AT4G22110

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.8154

Unknown

ALCOHOL DEHYDROGENASE PUTATIVE
AT5G63620

Predicted

Phylogenetic profile method

FSW = 0.7794

Unknown

OXIDOREDUCTASE ZINC-BINDING DEHYDROGENASE FAMILY PROTEIN
AT4G05320

Predicted

Gene fusion method

FSW = 0.0126

Unknown

UBQ10 (POLYUBIQUITIN 10) PROTEIN BINDING

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454