Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G26450 - ( beta-13-glucanase-related )

67 Proteins interacs with AT1G26450
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT5G61790

Predicted

Phenotypic Enhancement

FSW = 0.1739

Unknown

CALNEXIN 1 (CNX1)
AT5G66680

Predicted

Phenotypic Enhancement

FSW = 0.2070

Unknown

DGL1 DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE-PROTEIN GLYCOTRANSFERASE
AT2G44610

Predicted

interaction prediction

FSW = 0.1277

Unknown

RAB6A GTP BINDING / PROTEIN BINDING
AT1G31780

Predicted

Phenotypic Enhancement

FSW = 0.2131

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CONSERVED OLIGOMERIC COMPLEX COG6 (INTERPROIPR010490) HAS 281 BLAST HITS TO 279 PROTEINS IN 131 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 132 FUNGI - 106 PLANTS - 21 VIRUSES - 0 OTHER EUKARYOTES - 20 (SOURCE NCBI BLINK)
AT2G45200

Predicted

Phenotypic Enhancement

FSW = 0.2766

Unknown

GOS12 (GOLGI SNARE 12) SNARE BINDING
AT5G45130

Predicted

Phenotypic Enhancement

FSW = 0.1172

Unknown

RHA1 (RAB HOMOLOG 1) GTP BINDING
AT2G30710

Predicted

Phenotypic Enhancement

FSW = 0.3060

Unknown

RABGAP/TBC DOMAIN-CONTAINING PROTEIN
AT5G27380

Predicted

interologs mapping

FSW = 0.0296

Unknown

GSH2 (GLUTATHIONE SYNTHETASE 2) GLUTATHIONE SYNTHASE
AT5G63840

Predicted

interaction prediction

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1902

Unknown

RSW3 (RADIAL SWELLING 3) GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G49340

Predicted

Synthetic Lethality

FSW = 0.0220

Unknown

ATPI4K ALPHA 1-PHOSPHATIDYLINOSITOL 4-KINASE/ INOSITOL OR PHOSPHATIDYLINOSITOL KINASE
AT5G17770

Predicted

Phenotypic Suppression

FSW = 0.0234

Unknown

ATCBR (ARABIDOPSIS THALIANA NADHCYTOCHROME B5 REDUCTASE 1) CYTOCHROME-B5 REDUCTASE
AT5G23630

Predicted

Phenotypic Enhancement

FSW = 0.2168

Unknown

ATPASE E1-E2 TYPE FAMILY PROTEIN / HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILIY PROTEIN
AT1G07670

Predicted

Phenotypic Enhancement

FSW = 0.2634

Unknown

CALCIUM-TRANSPORTING ATPASE
AT4G34580

Predicted

Synthetic Lethality

FSW = 0.0915

Unknown

COW1 (CAN OF WORMS1) PHOSPHATIDYLINOSITOL TRANSPORTER/ TRANSPORTER
AT5G52640

Predicted

Affinity Capture-MS

Synthetic Lethality

FSW = 0.0521

Unknown

ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT2G19830

Predicted

interologs mapping

FSW = 0.0370

Unknown

SNF72
AT4G17270

Predicted

synthetic growth defect

FSW = 0.0444

Unknown

MO25 FAMILY PROTEIN
AT4G35020

Predicted

interologs mapping

FSW = 0.0171

Unknown

ARAC3 (ARABIDOPSIS RAC-LIKE 3) GTP BINDING / GTPASE
AT4G33090

Predicted

interaction prediction

FSW = 0.0075

Unknown

APM1 (AMINOPEPTIDASE M1) AMINOPEPTIDASE
AT5G57015

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0024

Unknown

CKL12 (CASEIN KINASE I-LIKE 12) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G56170

Predicted

Synthetic Lethality

Synthetic Lethality

interaction prediction

FSW = 0.0109

Unknown

NF-YC2 (NUCLEAR FACTOR Y SUBUNIT C2) DNA BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR
AT4G37940

Predicted

Synthetic Lethality

Synthetic Lethality

interaction prediction

FSW = 0.0137

Unknown

AGL21 TRANSCRIPTION FACTOR
AT2G03710

Predicted

interologs mapping

FSW = 0.0095

Unknown

SEP4 (SEPALLATA 4) DNA BINDING / TRANSCRIPTION FACTOR
AT5G18280

Predicted

Phenotypic Enhancement

FSW = 0.3497

Unknown

ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) ATPASE/ NUCLEOTIDE DIPHOSPHATASE
AT1G71270

Predicted

Phenotypic Enhancement

FSW = 0.1766

Unknown

POK (POKY POLLEN TUBE)
AT1G67490

Predicted

interaction prediction

Phenotypic Enhancement

Synthetic Lethality

Synthetic Lethality

FSW = 0.3075

Unknown

GCS1 (GLUCOSIDASE 1) ALPHA-GLUCOSIDASE
AT2G39630

Predicted

Phenotypic Enhancement

FSW = 0.1636

Unknown

GLYCOSYL TRANSFERASE FAMILY 2 PROTEIN
AT3G05710

Predicted

Phenotypic Enhancement

FSW = 0.2455

Unknown

SYP43 (SYNTAXIN OF PLANTS 43) SNAP RECEPTOR
AT1G01020

Predicted

Phenotypic Enhancement

FSW = 0.0959

Unknown

ARV1
AT5G38460

Predicted

Phenotypic Enhancement

FSW = 0.2582

Unknown

ALG6 ALG8 GLYCOSYLTRANSFERASE FAMILY PROTEIN
AT2G44660

Predicted

Phenotypic Enhancement

FSW = 0.2125

Unknown

TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TRANSFERASE TRANSFERRING HEXOSYL GROUPS
AT4G39220

Predicted

Phenotypic Enhancement

FSW = 0.2835

Unknown

ATRER1A
AT5G63960

Predicted

Synthetic Lethality

FSW = 0.0110

Unknown

EMB2780 (EMBRYO DEFECTIVE 2780) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT2G37560

Predicted

Synthetic Lethality

FSW = 0.0033

Unknown

ORC2 (ORIGIN RECOGNITION COMPLEX SECOND LARGEST SUBUNIT 2) DNA REPLICATION ORIGIN BINDING / PROTEIN BINDING
AT1G07430

Predicted

Synthetic Lethality

FSW = 0.0706

Unknown

PROTEIN PHOSPHATASE 2C PUTATIVE / PP2C PUTATIVE
AT1G16560

Predicted

Phenotypic Enhancement

FSW = 0.3049

Unknown

PER1-LIKE FAMILY PROTEIN
AT1G02145

Predicted

Phenotypic Enhancement

FSW = 0.2230

Unknown

TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G16900

Predicted

Phenotypic Enhancement

FSW = 0.0973

Unknown

SUGAR BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G20575

Predicted

Phenotypic Enhancement

FSW = 0.1600

Unknown

DOLICHYL-PHOSPHATE BETA-D-MANNOSYLTRANSFERASE PUTATIVE / DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE PUTATIVE / MANNOSE-P-DOLICHOL SYNTHASE PUTATIVE
AT1G48760

Predicted

Phenotypic Enhancement

FSW = 0.2267

Unknown

DELTA-ADR (DELTA-ADAPTIN) BINDING / CLATHRIN BINDING / PROTEIN BINDING / PROTEIN TRANSPORTER
AT1G50030

Predicted

Synthetic Rescue

co-fractionation

Co-fractionation

FSW = 0.0254

Unknown

TOR (TARGET OF RAPAMYCIN) 1-PHOSPHATIDYLINOSITOL-3-KINASE/ PROTEIN BINDING
AT1G73570

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0512

Unknown

SUPPRESSOR OF LIN-12-LIKE PROTEIN-RELATED / SEL-1 PROTEIN-RELATED
AT2G34500

Predicted

Phenotypic Enhancement

FSW = 0.1895

Unknown

CYP710A1 (CYTOCHROME P450 FAMILY 710 SUBFAMILY A POLYPEPTIDE 1) C-22 STEROL DESATURASE/ OXYGEN BINDING
AT3G12180

Predicted

Phenotypic Enhancement

FSW = 0.2213

Unknown

CORNICHON FAMILY PROTEIN
AT3G18430

Predicted

interaction prediction

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

FSW = 0.0612

Unknown

CALCIUM-BINDING EF HAND FAMILY PROTEIN
AT3G50860

Predicted

Phenotypic Enhancement

FSW = 0.1636

Unknown

CLATHRIN ADAPTOR COMPLEX SMALL CHAIN FAMILY PROTEIN
AT4G25750

Predicted

Phenotypic Suppression

FSW = 0.0146

Unknown

ABC TRANSPORTER FAMILY PROTEIN
AT4G33080

Predicted

synthetic growth defect

FSW = 0.0247

Unknown

PROTEIN KINASE PUTATIVE
AT5G09740

Predicted

synthetic growth defect

FSW = 0.0199

Unknown

HAM2 (HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2) H3/H4 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE/ NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G10260

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.1089

Unknown

ATRABH1E (ARABIDOPSIS RAB GTPASE HOMOLOG H1E) GTP BINDING
AT5G26680

Predicted

Synthetic Lethality

FSW = 0.0152

Unknown

ENDONUCLEASE PUTATIVE
AT5G27970Predicted

Phenotypic Enhancement

FSW = 0.1399

Unknown

BINDING
AT5G52210

Predicted

Phenotypic Enhancement

FSW = 0.1204

Unknown

ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1) GTP BINDING
AT1G57600

Predicted

Phenotypic Enhancement

FSW = 0.3993

Unknown

MEMBRANE BOUND O-ACYL TRANSFERASE (MBOAT) FAMILY PROTEIN
AT1G57620

Predicted

Affinity Capture-Western

FSW = 0.0561

Unknown

EMP24/GP25L/P24 FAMILY PROTEIN
AT1G60680

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0093

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT2G22530

Predicted

Phenotypic Enhancement

FSW = 0.3431

Unknown

CATALYTIC/ TRANSFERASE
AT2G27600

Predicted

interologs mapping

FSW = 0.0523

Unknown

SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1) ATP BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT2G34770

Predicted

Phenotypic Suppression

FSW = 0.1449

Unknown

FAH1 (FATTY ACID HYDROXYLASE 1) CATALYTIC/ FATTY ACID ALPHA-HYDROXYLASE
AT3G05000

Predicted

Phenotypic Enhancement

FSW = 0.0822

Unknown

TRANSPORT PROTEIN PARTICLE (TRAPP) COMPONENT BET3 FAMILY PROTEIN
AT3G55380

Predicted

Phenotypic Suppression

FSW = 0.0443

Unknown

UBC14 (UBIQUITIN-CONJUGATING ENZYME 14) UBIQUITIN-PROTEIN LIGASE
AT4G08500

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

FSW = 0.0935

Unknown

MEKK1 (MAP KINASE KINASE KINASE 1) DNA BINDING / MAP KINASE KINASE KINASE/ KINASE/ KINASE BINDING / PROTEIN BINDING
AT4G32530

Predicted

interologs mapping

FSW = 0.0269

Unknown

VACUOLAR ATP SYNTHASE PUTATIVE / V-ATPASE PUTATIVE
AT4G37990

Predicted

Synthetic Lethality

Synthetic Lethality

interaction prediction

FSW = 0.0152

Unknown

ELI3-2 (ELICITOR-ACTIVATED GENE 3-2) ARYL-ALCOHOL DEHYDROGENASE/ MANNITOL DEHYDROGENASE
AT5G42000

Predicted

Phenotypic Enhancement

FSW = 0.1152

Unknown

ORMDL FAMILY PROTEIN
AT5G24940

Predicted

interaction prediction

FSW = 0.0523

Unknown

PROTEIN PHOSPHATASE 2C PUTATIVE / PP2C PUTATIVE
AT1G54960

Predicted

interaction prediction

FSW = 0.0761

Unknown

ANP2 MAP KINASE KINASE KINASE/ KINASE

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Fasta sequences:

Proteins

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Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454