Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G26560 - ( BGLU40 (BETA GLUCOSIDASE 40) catalytic/ cation binding / hydrolase hydrolyzing O-glycosyl compounds )

45 Proteins interacs with AT1G26560
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT1G52400

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.9663

Class C:

plastid

BGLU18 (BETA GLUCOSIDASE 18) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G28540

Predicted

in vivo

FSW = 0.0454

Class C:

plastid

BIP1 ATP BINDING
AT5G61790

Predicted

in vivo

FSW = 0.0193

Class C:

plastid

CALNEXIN 1 (CNX1)
AT5G25980

Predicted

Phylogenetic profile method

FSW = 0.9552

Class C:

plastid

TGG2 (GLUCOSIDE GLUCOHYDROLASE 2) HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS / THIOGLUCOSIDASE
AT5G26000

Predicted

Phylogenetic profile method

FSW = 0.9443

Class C:

plastid

TGG1 (THIOGLUCOSIDE GLUCOHYDROLASE 1) HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS / THIOGLUCOSIDASE
AT2G44490

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9663

Class C:

plastid

PEN2 (PENETRATION 2) HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS / THIOGLUCOSIDASE
AT5G42020

Predicted

in vivo

FSW = 0.0457

Unknown

BIP2 ATP BINDING
AT3G09260

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9443

Unknown

PYK10 BETA-GLUCOSIDASE/ COPPER ION BINDING / FUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G66270

Predicted

Gene neighbors method

Phylogenetic profile method

FSW = 0.9552

Unknown

BGLU21 CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT4G27830

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9552

Unknown

BGLU10 (BETA GLUCOSIDASE 10) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT3G62750

Predicted

Phylogenetic profile method

FSW = 0.9663

Unknown

BGLU8 (BETA GLUCOSIDASE 8) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT4G27820

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9552

Unknown

BGLU9 (BETA GLUCOSIDASE 9) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT3G18080

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9663

Unknown

BGLU44 (B-S GLUCOSIDASE 44) (R)-AMYGDALIN BETA-GLUCOSIDASE/ 4-METHYLUMBELLIFERYL-BETA-D-GLUCOPYRANOSIDE BETA-GLUCOSIDASE/ BETA-GENTIOBIOSE BETA-GLUCOSIDASE/ CELLOBIOSE GLUCOSIDASE/ ESCULIN BETA-GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT2G44450

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9552

Unknown

BGLU15 (BETA GLUCOSIDASE 15) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G66280

Predicted

Gene neighbors method

Phylogenetic profile method

FSW = 0.9552

Unknown

BGLU22 CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT3G60120

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9552

Unknown

BGLU27 (BETA GLUCOSIDASE 27) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G75940

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.9552

Unknown

ATA27 CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT3G21370

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9552

Unknown

BGLU19 (BETA GLUCOSIDASE 19) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G54570Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9552

Unknown

BGLU41 (BETA GLUCOSIDASE 41) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G51490

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.9545

Unknown

BGLU36 (BETA GLUCOSIDASE 36) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT4G22100

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9663

Unknown

BGLU3 (BETA GLUCOSIDASE 2) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G24550

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9781

Unknown

BGLU32 (BETA GLUCOSIDASE 32) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G60090

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.9663

Unknown

BGLU4 (BETA GLUCOSIDASE 4) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT2G25630

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9663

Unknown

BGLU14 (BETA GLUCOSIDASE 14) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G24540

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9552

Unknown

BGLU31 (BETA GLUCOSIDASE 31) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G02850

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.9443

Unknown

BGLU11 (BETA GLUCOSIDASE 11) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT2G44480

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9552

Unknown

BGLU17 (BETA GLUCOSIDASE 17) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT2G44460

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9663

Unknown

BGLU28 (BETA GLUCOSIDASE 28) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT3G18070

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9663

Unknown

BGLU43 (BETA GLUCOSIDASE 43) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT3G62740

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9663

Unknown

BGLU7 (BETA GLUCOSIDASE 7) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G28510

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9663

Unknown

BGLU24 (BETA GLUCOSIDASE 24) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G61810

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.9663

Unknown

BGLU45 (BETA-GLUCOSIDASE 45) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G61820

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.9663

Unknown

BGLU46 (BETA GLUCOSIDASE 46) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT3G03640

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9663

Unknown

BGLU25 (BETA GLUCOSIDASE 25) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT4G21760

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9552

Unknown

BGLU47 (BETA-GLUCOSIDASE 47) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G36890

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9233

Unknown

BGLU42 (BETA GLUCOSIDASE 42) BETA-GLUCOSIDASE/ CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT3G60130

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9552

Unknown

BGLU16 (BETA GLUCOSIDASE 16) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT3G60140

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.9552

Unknown

DIN2 (DARK INDUCIBLE 2) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G51470

Predicted

Gene neighbors method

Phylogenetic profile method

FSW = 0.9552

Unknown

BGLU35 (BETA GLUCOSIDASE 35) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G47600

Predicted

Gene neighbors method

Phylogenetic profile method

FSW = 0.9552

Unknown

BGLU34 (BETA GLUCOSIDASE 34) HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS / THIOGLUCOSIDASE
AT1G45191

Predicted

Gene neighbors method

Phylogenetic profile method

FSW = 0.9552

Unknown

BGLU1 (BETA GLUCOSIDASE 1) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G48375

Predicted

Phylogenetic profile method

FSW = 0.9545

Unknown

TGG3 (THIOGLUCOSIDE GLUCOSIDASE 3) HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS / THIOGLUCOSIDASE
AT5G44640

Predicted

Phylogenetic profile method

FSW = 0.9663

Unknown

BGLU13 (BETA GLUCOSIDASE 13) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G42260

Predicted

Phylogenetic profile method

FSW = 0.9663

Unknown

BGLU12 (BETA GLUCOSIDASE 12) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT2G44470

Predicted

Phylogenetic profile method

FSW = 0.9663

Unknown

BGLU29 (BETA GLUCOSIDASE 29) CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS

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Fasta sequences:

Proteins

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Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454