Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Find locus: show subcellular location show Ontology

Export PPI as  



AtPIN will be upgraded. Please send your suggestions here

AT1G59580 - ( ATMPK2 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2) MAP kinase/ kinase/ protein kinase )

87 Proteins interacs with AT1G59580
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT4G37010

Experimental

filter binding

FSW = 0.0038

Unknown

CALTRACTIN PUTATIVE / CENTRIN PUTATIVE
AT5G40440

Experimental

FSW = 0.0430

Unknown

ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3) MAP KINASE KINASE
AT4G27280

Experimental

filter binding

FSW = 0.0356

Unknown

CALCIUM-BINDING EF HAND FAMILY PROTEIN
AT5G54490

Experimental

filter binding

FSW = 0.0296

Unknown

PBP1 (PINOID-BINDING PROTEIN 1) CALCIUM ION BINDING / PROTEIN BINDING
AT1G18350

Experimental

FSW = 0.0406

Unknown

ATMKK7 MAP KINASE KINASE/ KINASE
AT3G16480

Predicted

Affinity Capture-MS

FSW = 0.0506

Unknown

MPPALPHA (MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT) CATALYTIC/ METAL ION BINDING / METALLOENDOPEPTIDASE/ ZINC ION BINDING
AT5G09590

Predicted

Synthetic Lethality

two hybrid

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.0602

Unknown

MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT1G72730

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0758

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR 4A PUTATIVE / EIF-4A PUTATIVE
AT2G37270

Predicted

Synthetic Lethality

Affinity Capture-Western

two hybrid

two hybrid

Reconstituted Complex

Synthetic Lethality

FSW = 0.0384

Unknown

ATRPS5B (RIBOSOMAL PROTEIN 5B) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G62870

Predicted

Affinity Capture-MS

FSW = 0.0178

Unknown

60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT1G11320

Predicted

two hybrid

FSW = 0.0174

Unknown

UNKNOWN PROTEIN
AT4G01370

Predicted

Shared biological function

Gene fusion method

Phylogenetic profile method

Co-expression

FSW = 0.1443

Unknown

ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4) MAP KINASE/ KINASE
AT3G09820

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0748

Unknown

ADK1 (ADENOSINE KINASE 1) ADENOSINE KINASE/ COPPER ION BINDING
AT1G65240

Predicted

Synthetic Lethality

FSW = 0.0199

Unknown

ASPARTYL PROTEASE FAMILY PROTEIN
AT3G55400

Predicted

Synthetic Lethality

two hybrid

Synthetic Lethality

FSW = 0.0423

Unknown

OVA1 (OVULE ABORTION 1) ATP BINDING / AMINOACYL-TRNA LIGASE/ METHIONINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT4G23430

Predicted

Synthetic Lethality

FSW = 0.0046

Unknown

SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN
AT4G29810

Predicted

Phenotypic Suppression

Phenotypic Enhancement

FSW = 0.0993

Unknown

ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2) MAP KINASE KINASE/ KINASE
AT4G08690

Predicted

Affinity Capture-MS

FSW = 0.0711

Unknown

SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT1G55690

Predicted

two hybrid

FSW = 0.0444

Unknown

SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT5G40370

Predicted

Affinity Capture-MS

FSW = 0.0306

Unknown

GLUTAREDOXIN PUTATIVE
AT1G06390

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.2039

Unknown

GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1) GLYCOGEN SYNTHASE KINASE 3/ KINASE
AT1G04750

Predicted

Phenotypic Enhancement

FSW = 0.0237

Unknown

VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)
AT5G58800

Predicted

Reconstituted Complex

FSW = 0.1111

Unknown

QUINONE REDUCTASE FAMILY PROTEIN
AT5G45380

Predicted

Affinity Capture-MS

FSW = 0.0716

Unknown

SODIUMSOLUTE SYMPORTER FAMILY PROTEIN
AT4G18710

Predicted

Shared biological function

Phylogenetic profile method

Co-expression

FSW = 0.2462

Unknown

BIN2 (BRASSINOSTEROID-INSENSITIVE 2) GLYCOGEN SYNTHASE KINASE 3/ KINASE/ PROTEIN KINASE
AT4G15000

Predicted

two hybrid

Affinity Capture-Western

Phenotypic Suppression

FSW = 0.0254

Unknown

60S RIBOSOMAL PROTEIN L27 (RPL27C)
AT2G31660Predicted

Phenotypic Suppression

Phenotypic Enhancement

FSW = 0.0107

Unknown

SAD2 (SUPER SENSITIVE TO ABA AND DROUGHT2) BINDING / PROTEIN TRANSPORTER
AT4G14340

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0789

Unknown

CKI1 (CASEIN KINASE I) KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G34430

Predicted

Affinity Capture-MS

FSW = 0.0539

Unknown

CHB3 DNA BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING
AT5G03415

Predicted

Phenotypic Enhancement

FSW = 0.0128

Unknown

DPB PROTEIN BINDING / PROTEIN HETERODIMERIZATION
AT1G02680

Predicted

Affinity Capture-MS

FSW = 0.0160

Unknown

TAF13 (TBP-ASSOCIATED FACTOR 13) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G18040

Predicted

Phylogenetic profile method

FSW = 0.0611

Unknown

CDKD13 (CYCLIN-DEPENDENT KINASE D13) KINASE/ PROTEIN KINASE
AT2G44900

Predicted

two hybrid

Synthetic Lethality

FSW = 0.1392

Unknown

ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN / F-BOX FAMILY PROTEIN
AT5G61000

Predicted

two hybrid

FSW = 0.0063

Unknown

REPLICATION PROTEIN PUTATIVE
AT4G24440

Predicted

Phenotypic Suppression

FSW = 0.0066

Unknown

TRANSCRIPTION INITIATION FACTOR IIA GAMMA CHAIN / TFIIA-GAMMA (TFIIA-S)
AT5G17690

Predicted

Phenotypic Enhancement

FSW = 0.0043

Unknown

TFL2 (TERMINAL FLOWER 2) DNA BINDING / METHYLATED HISTONE RESIDUE BINDING
AT1G10060

Predicted

two hybrid

FSW = 0.0057

Unknown

BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE 1 / BRANCHED-CHAIN AMINO ACID TRANSAMINASE 1 (BCAT1)
AT1G58230

Predicted

Phenotypic Suppression

Phenotypic Enhancement

FSW = 0.0222

Unknown

WD-40 REPEAT FAMILY PROTEIN / BEIGE-RELATED
AT4G07820

Predicted

Affinity Capture-Western

Synthetic Lethality

FSW = 0.0928

Unknown

PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT2G38960

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0792

Unknown

AERO2 (ARABIDOPSIS ENDOPLASMIC RETICULUM OXIDOREDUCTINS 2) FAD BINDING / ELECTRON CARRIER/ OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR / PROTEIN BINDING
AT1G52300

Predicted

Affinity Capture-MS

FSW = 0.0077

Unknown

60S RIBOSOMAL PROTEIN L37 (RPL37B)
AT4G10920

Predicted

Affinity Capture-MS

FSW = 0.0170

Unknown

KELP DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION REGULATOR
AT2G43460

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0269

Unknown

60S RIBOSOMAL PROTEIN L38 (RPL38A)
AT5G63960

Predicted

Synthetic Lethality

two hybrid

two hybrid

Affinity Capture-Western

Synthetic Lethality

FSW = 0.0469

Unknown

EMB2780 (EMBRYO DEFECTIVE 2780) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT4G29430

Predicted

Affinity Capture-MS

FSW = 0.0193

Unknown

RPS15AE (RIBOSOMAL PROTEIN S15A E) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G08260

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0475

Unknown

TIL1 (TILTED 1) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING / ZINC ION BINDING
AT1G25155Predicted

Phenotypic Suppression

FSW = 0.0173

Unknown

ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT1G14910

Predicted

two hybrid

FSW = 0.0672

Unknown

EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN
AT1G55810

Predicted

two hybrid

FSW = 0.0207

Unknown

URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE
AT2G31060

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.1154

Unknown

ELONGATION FACTOR FAMILY PROTEIN
AT2G46280

Predicted

interologs mapping

Affinity Capture-Western

Affinity Capture-Western

two hybrid

two hybrid

Reconstituted Complex

interologs mapping

FSW = 0.1186

Unknown

TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1) NUCLEOTIDE BINDING / PROTEIN BINDING
AT3G13330Predicted

two hybrid

FSW = 0.0630

Unknown

BINDING
AT3G53880

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Co-purification

FSW = 0.0603

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT4G21490

Predicted

Affinity Capture-MS

FSW = 0.0164

Unknown

NDB3 NADH DEHYDROGENASE
AT4G37660

Predicted

two hybrid

FSW = 0.1111

Unknown

RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT5G66640

Predicted

biochemical

FSW = 0.0111

Unknown

DAR3 (DA1-RELATED PROTEIN 3)
AT1G74140

Predicted

two hybrid

FSW = 0.0110

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN INTEGRAL TO MEMBRANE CHLOROPLAST CONTAINS INTERPRO DOMAIN/S PEPTIDASE S54 RHOMBOID (INTERPROIPR002610) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS RHOMBOID FAMILY PROTEIN (TAIRAT1G741301) HAS 484 BLAST HITS TO 484 PROTEINS IN 189 SPECIES ARCHAE - 2 BACTERIA - 267 METAZOA - 30 FUNGI - 47 PLANTS - 36 VIRUSES - 0 OTHER EUKARYOTES - 102 (SOURCE NCBI BLINK)
AT2G20410

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0738

Unknown

ACTIVATING SIGNAL COINTEGRATOR-RELATED
AT2G30650

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0667

Unknown

CATALYTIC
AT2G31260

Predicted

Phenotypic Suppression

FSW = 0.0117

Unknown

APG9 (AUTOPHAGY 9)
AT2G38905

Predicted

interologs mapping

FSW = 0.0188

Unknown

HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT3G12490

Predicted

synthetic growth defect

FSW = 0.0742

Unknown

CYSTEINE PROTEASE INHIBITOR PUTATIVE / CYSTATIN PUTATIVE
AT3G59290

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0246

Unknown

EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN
AT3G60245

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.1237

Unknown

60S RIBOSOMAL PROTEIN L37A (RPL37AC)
AT4G21480

Predicted

Affinity Capture-MS

FSW = 0.0189

Unknown

CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT4G37490

Predicted

Synthetic Lethality

FSW = 0.0833

Unknown

CYCB11 (CYCLIN B11) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT4G21820Predicted

Phenotypic Suppression

Phenotypic Enhancement

FSW = 0.0238

Unknown

BINDING / CALMODULIN BINDING
AT2G35320

Predicted

Phenotypic Suppression

Phenotypic Enhancement

FSW = 0.0113

Unknown

ATEYA (ARABIDOPSIS THALIANA EYES ABSENT HOMOLOG) PROTEIN TYROSINE PHOSPHATASE METAL-DEPENDENT
AT3G58040

Predicted

Phenotypic Enhancement

FSW = 0.0063

Unknown

SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT4G35780

Predicted

Phenotypic Suppression

FSW = 0.0233

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT2G17700

Predicted

Phenotypic Suppression

FSW = 0.0235

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT1G53570

Predicted

two hybrid

FSW = 0.0077

Unknown

MAP3KA ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G10210

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.1357

Unknown

ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE
AT5G67380

Predicted

Gene fusion method

Co-expression

FSW = 0.0130

Unknown

CKA1 (CASEIN KINASE ALPHA 1) KINASE
AT2G18170

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.2843

Unknown

ATMPK7 (ARABIDOPSIS THALIANA MAP KINASE 7) MAP KINASE/ KINASE
AT2G43790

Predicted

Shared biological function

Phylogenetic profile method

Co-expression

FSW = 0.1287

Unknown

ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6) MAP KINASE/ KINASE
AT4G36450

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.3304

Unknown

ATMPK14 (MITOGEN-ACTIVATED PROTEIN KINASE 14) MAP KINASE/ KINASE
AT3G45640

Predicted

Shared biological function

Phylogenetic profile method

Co-expression

FSW = 0.2717

Unknown

ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3) MAP KINASE/ KINASE/ PROTEIN BINDING / PROTEIN KINASE
AT4G14365

Predicted

Enriched domain pair

Gene fusion method

Co-expression

FSW = 0.0538

Unknown

ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN / ANKYRIN REPEAT FAMILY PROTEIN
AT3G63330

Predicted

Gene fusion method

Co-expression

FSW = 0.1075

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT3G59790

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.1874

Unknown

ATMPK10 MAP KINASE/ KINASE
AT1G07880

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.1924

Unknown

ATMPK13 MAP KINASE/ KINASE
AT2G46070

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.1287

Unknown

MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12) MAP KINASE/ KINASE
AT3G05840

Predicted

Phylogenetic profile method

FSW = 0.2752

Unknown

ATSK12 PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G14640

Predicted

Phylogenetic profile method

FSW = 0.2308

Unknown

SK13 (SHAGGY-LIKE KINASE 13) ATP BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G26751

Predicted

Phylogenetic profile method

FSW = 0.1966

Unknown

ATSK11 PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT2G30980

Predicted

Phylogenetic profile method

FSW = 0.1673

Unknown

ASKDZETA (ARABIDOPSIS SHAGGY-RELATED PROTEIN KINASE DZETA) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE

Downloads

Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454