Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G66590 - ( cox19 family protein )

110 Proteins interacs with AT1G66590
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G09630

Predicted

Affinity Capture-MS

FSW = 0.0296

Unknown

60S RIBOSOMAL PROTEIN L4/L1 (RPL4A)
AT2G17360

Predicted

synthetic growth defect

Synthetic Rescue

FSW = 0.1303

Unknown

40S RIBOSOMAL PROTEIN S4 (RPS4A)
AT1G20260

Predicted

Phenotypic Enhancement

FSW = 0.1103

Unknown

HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT4G18160

Predicted

two hybrid

FSW = 0.0091

Unknown

KCO6 OUTWARD RECTIFIER POTASSIUM CHANNEL
AT5G10350

Predicted

Phenotypic Enhancement

FSW = 0.0269

Unknown

POLYADENYLATE-BINDING PROTEIN FAMILY PROTEIN / PABP FAMILY PROTEIN
AT1G72370

Predicted

synthetic growth defect

FSW = 0.0241

Unknown

P40 STRUCTURAL CONSTITUENT OF RIBOSOME
AT5G09660

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

FSW = 0.2873

Unknown

PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2) MALATE DEHYDROGENASE
AT3G48170

Predicted

Phenotypic Suppression

FSW = 0.1342

Unknown

ALDH10A9 3-CHLOROALLYL ALDEHYDE DEHYDROGENASE/ OXIDOREDUCTASE
AT3G58610

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2322

Unknown

KETOL-ACID REDUCTOISOMERASE
AT3G56160Predicted

Phenotypic Enhancement

FSW = 0.0793

Unknown

BILE ACIDSODIUM SYMPORTER
AT1G19660

Predicted

two hybrid

FSW = 0.0205

Unknown

WOUND-RESPONSIVE FAMILY PROTEIN
AT1G10070

Predicted

biochemical

FSW = 0.0665

Unknown

ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) BRANCHED-CHAIN-AMINO-ACID TRANSAMINASE/ CATALYTIC
AT1G45145

Predicted

two hybrid

FSW = 0.1300

Unknown

ATTRX5 OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR
AT5G60540

Predicted

synthetic growth defect

FSW = 0.1152

Unknown

PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT1G73230

Predicted

two hybrid

FSW = 0.0049

Unknown

NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX (NAC) DOMAIN-CONTAINING PROTEIN
AT1G59820

Predicted

two hybrid

FSW = 0.0052

Unknown

ALA3 (AMINOPHOSPHOLIPID ATPASE3) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM / PHOSPHOLIPID TRANSPORTER
AT2G37280

Predicted

two hybrid

FSW = 0.0088

Unknown

PDR5 (PLEIOTROPIC DRUG RESISTANCE 5) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT1G74050

Predicted

two hybrid

FSW = 0.0253

Unknown

60S RIBOSOMAL PROTEIN L6 (RPL6C)
AT5G47700

Predicted

synthetic growth defect

FSW = 0.0369

Unknown

60S ACIDIC RIBOSOMAL PROTEIN P1 (RPP1C)
AT1G04750

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

FSW = 0.2237

Unknown

VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)
AT2G44690

Predicted

Synthetic Lethality

two hybrid

FSW = 0.0643

Unknown

ARAC9 GTP BINDING
AT4G02050

Predicted

Synthetic Lethality

FSW = 0.0088

Unknown

SUGAR TRANSPORTER PUTATIVE
AT1G77210

Predicted

Affinity Capture-MS

FSW = 0.0199

Unknown

SUGAR TRANSPORTER PUTATIVE
AT4G14350

Predicted

Phenotypic Enhancement

FSW = 0.0983

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT1G21700

Predicted

Synthetic Lethality

Phenotypic Enhancement

Phenotypic Enhancement

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

interologs mapping

Affinity Capture-Western

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

Synthetic Lethality

two hybrid

interologs mapping

synthetic growth defect

Phenotypic Enhancement

FSW = 0.2729

Unknown

ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C) DNA BINDING
AT2G40290

Predicted

Affinity Capture-MS

FSW = 0.0119

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 PUTATIVE / EIF-2A PUTATIVE / EIF-2-ALPHA PUTATIVE
AT5G47630

Predicted

interologs mapping

FSW = 0.0545

Unknown

MTACP3 (MITOCHONDRIAL ACYL CARRIER PROTEIN 3) ACYL CARRIER/ COFACTOR BINDING
AT5G01340

Predicted

two hybrid

FSW = 0.0091

Unknown

MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT1G64880

Predicted

two hybrid

FSW = 0.1434

Unknown

RIBOSOMAL PROTEIN S5 FAMILY PROTEIN
AT5G24090

Predicted

Synthetic Lethality

FSW = 0.0871

Unknown

ACIDIC ENDOCHITINASE (CHIB1)
AT5G66590

Predicted

Affinity Capture-MS

FSW = 0.0274

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT3G54840

Predicted

synthetic growth defect

FSW = 0.1360

Unknown

ARA6 GTP BINDING / GTPASE
AT3G07140

Predicted

synthetic growth defect

FSW = 0.0613

Unknown

GPI TRANSAMIDASE COMPONENT GPI16 SUBUNIT FAMILY PROTEIN
AT1G52300

Predicted

two hybrid

FSW = 0.0627

Unknown

60S RIBOSOMAL PROTEIN L37 (RPL37B)
AT4G13090

Predicted

two hybrid

FSW = 0.0692

Unknown

XYLOGLUCANXYLOGLUCOSYL TRANSFERASE PUTATIVE / XYLOGLUCAN ENDOTRANSGLYCOSYLASE PUTATIVE / ENDO-XYLOGLUCAN TRANSFERASE PUTATIVE
AT3G02560

Predicted

Synthetic Lethality

synthetic growth defect

FSW = 0.0992

Unknown

40S RIBOSOMAL PROTEIN S7 (RPS7B)
AT1G62800

Predicted

synthetic growth defect

FSW = 0.1645

Unknown

ASP4 (ASPARTATE AMINOTRANSFERASE 4) CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING / TRANSAMINASE/ TRANSFERASE TRANSFERRING NITROGENOUS GROUPS
AT3G13900

Predicted

Phenotypic Suppression

FSW = 0.1554

Unknown

ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM
AT3G14600

Predicted

two hybrid

FSW = 0.0265

Unknown

60S RIBOSOMAL PROTEIN L18A (RPL18AC)
AT1G19730

Predicted

Phenotypic Enhancement

two hybrid

FSW = 0.0708

Unknown

ATTRX4 OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR
AT1G05180

Predicted

synthetic growth defect

Phenotypic Enhancement

FSW = 0.1921

Unknown

AXR1 (AUXIN RESISTANT 1) SMALL PROTEIN ACTIVATING ENZYME
AT4G17190

Predicted

synthetic growth defect

FSW = 0.1112

Unknown

FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT1G08260

Predicted

Affinity Capture-MS

FSW = 0.0070

Unknown

TIL1 (TILTED 1) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING / ZINC ION BINDING
AT1G09810

Predicted

Synthetic Lethality

Synthetic Lethality

two hybrid

Phenotypic Enhancement

FSW = 0.1125

Unknown

ECT11 (EVOLUTIONARILY CONSERVED C-TERMINAL REGION 11)
AT1G17130

Predicted

two hybrid

FSW = 0.0109

Unknown

CELL CYCLE CONTROL PROTEIN-RELATED
AT1G21370

Predicted

synthetic growth defect

FSW = 0.1524

Unknown

UNKNOWN PROTEIN
AT1G22290

Predicted

two hybrid

FSW = 0.0593

Unknown

14-3-3 PROTEIN GF14 PUTATIVE (GRF10)
AT1G23480

Predicted

two hybrid

FSW = 0.0109

Unknown

ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3) CELLULOSE SYNTHASE/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G25155Predicted

synthetic growth defect

FSW = 0.1772

Unknown

ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT1G27040

Predicted

Phenotypic Enhancement

FSW = 0.1094

Unknown

NITRATE TRANSPORTER PUTATIVE
AT1G27840

Predicted

two hybrid

FSW = 0.0118

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G33770

Predicted

Affinity Capture-MS

FSW = 0.0062

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT1G35350

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

FSW = 0.3430

Unknown

LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK)
AT1G44180

Predicted

synthetic growth defect

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

FSW = 0.2457

Unknown

AMINOACYLASE PUTATIVE / N-ACYL-L-AMINO-ACID AMIDOHYDROLASE PUTATIVE
AT1G47830

Predicted

Synthetic Rescue

Synthetic Rescue

Phenotypic Enhancement

Synthetic Rescue

two hybrid

Affinity Capture-Western

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

two hybrid

Synthetic Rescue

Synthetic Lethality

Phenotypic Suppression

Affinity Capture-Western

Phenotypic Enhancement

synthetic growth defect

FSW = 0.3683

Unknown

CLATHRIN COAT ASSEMBLY PROTEIN PUTATIVE
AT1G60680

Predicted

synthetic growth defect

FSW = 0.1373

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G10210

Predicted

biochemical

FSW = 0.1359

Unknown

ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE
AT1G10980

Predicted

Synthetic Rescue

FSW = 0.2009

Unknown

INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN VACUOLE EXPRESSED IN 8 PLANT STRUCTURES EXPRESSED DURING 6 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G616701) HAS 482 BLAST HITS TO 481 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 255 FUNGI - 99 PLANTS - 97 VIRUSES - 0 OTHER EUKARYOTES - 31 (SOURCE NCBI BLINK)
AT1G11510

Predicted

synthetic growth defect

FSW = 0.1437

Unknown

DNA-BINDING STOREKEEPER PROTEIN-RELATED
AT1G27080

Predicted

two hybrid

FSW = 0.0643

Unknown

NRT16 (NITRATE TRANSPORTER 16) LOW AFFINITY NITRATE TRANSMEMBRANE TRANSPORTER/ TRANSPORTER
AT1G29630

Predicted

Synthetic Lethality

FSW = 0.0466

Unknown

NUCLEASE
AT1G55060

Predicted

Synthetic Lethality

FSW = 0.1309

Unknown

UBQ12 (UBIQUITIN 12) PROTEIN BINDING
AT1G68530

Predicted

Phenotypic Suppression

FSW = 0.0525

Unknown

KCS6 (3-KETOACYL-COA SYNTHASE 6) CATALYTIC/ TRANSFERASE TRANSFERRING ACYL GROUPS OTHER THAN AMINO-ACYL GROUPS
AT1G74810

Predicted

Synthetic Lethality

FSW = 0.1190

Unknown

BOR5 ANION EXCHANGER
AT1G78770

Predicted

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

synthetic growth defect

FSW = 0.2251

Unknown

CELL DIVISION CYCLE FAMILY PROTEIN
AT2G31020

Predicted

two hybrid

two hybrid

two hybrid

Affinity Capture-MS

FSW = 0.0480

Unknown

ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A) OXYSTEROL BINDING
AT2G32160

Predicted

Synthetic Lethality

Phenotypic Enhancement

synthetic growth defect

FSW = 0.0992

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S N2227-LIKE (INTERPROIPR012901) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G321701) HAS 325 BLAST HITS TO 315 PROTEINS IN 141 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 95 FUNGI - 130 PLANTS - 30 VIRUSES - 0 OTHER EUKARYOTES - 70 (SOURCE NCBI BLINK)
AT3G22290

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

synthetic growth defect

FSW = 0.3309

Unknown

UNKNOWN PROTEIN
AT3G45240

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

synthetic growth defect

FSW = 0.2854

Unknown

GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1) KINASE
AT3G47610

Predicted

Synthetic Lethality

synthetic growth defect

FSW = 0.1823

Unknown

TRANSCRIPTION REGULATOR/ ZINC ION BINDING
AT4G14000

Predicted

two hybrid

FSW = 0.0790

Unknown

UNKNOWN PROTEIN
AT4G21490

Predicted

synthetic growth defect

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

Synthetic Lethality

FSW = 0.3471

Unknown

NDB3 NADH DEHYDROGENASE
AT4G27130

Predicted

synthetic growth defect

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.3046

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT4G29580

Predicted

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

two hybrid

FSW = 0.3533

Unknown

CYTIDINE DEAMINASE PUTATIVE / CYTIDINE AMINOHYDROLASE PUTATIVE
AT4G34370

Predicted

Phenotypic Enhancement

FSW = 0.0827

Unknown

ARI1 (ARIADNE) PROTEIN BINDING / ZINC ION BINDING
AT5G01770

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

Phenotypic Enhancement

two hybrid

FSW = 0.2415

Unknown

RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING
AT5G11500

Predicted

Synthetic Rescue

FSW = 0.1716

Unknown

UNKNOWN PROTEIN
AT5G16170

Predicted

synthetic growth defect

Phenotypic Enhancement

FSW = 0.2716

Unknown

UNKNOWN PROTEIN
AT5G16980

Predicted

synthetic growth defect

Affinity Capture-Western

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

two hybrid

FSW = 0.3770

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G45620

Predicted

Phenotypic Enhancement

synthetic growth defect

FSW = 0.2624

Unknown

26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9)
AT5G60550

Predicted

Synthetic Lethality

FSW = 0.0675

Unknown

GRIK2 (GEMINIVIRUS REP INTERACTING KINASE 2) KINASE
ATCG00905Predicted

Synthetic Rescue

FSW = 0.1066

Unknown

CHLOROPLAST GENE ENCODING RIBOSOMAL PROTEIN S12 THE GENE IS LOCATED IN THREE DISTINCT LOCI ON THE CHLOROPLAST GENOME AND IS TRANSPLICED TO MAKE ONE TRANSCRIPT
AT1G68020

Predicted

two hybrid

FSW = 0.0391

Unknown

ATTPS6 ALPHAALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT2G01830

Predicted

two hybrid

FSW = 0.0039

Unknown

WOL (WOODEN LEG) CYTOKININ RECEPTOR/ OSMOSENSOR/ PHOSPHOPROTEIN PHOSPHATASE/ PROTEIN HISTIDINE KINASE
AT2G24960

Predicted

synthetic growth defect

FSW = 0.1163

Unknown

UNKNOWN PROTEIN
AT2G25280

Predicted

two hybrid

FSW = 0.0840

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S MEDIATOR OF ERBB2-DRIVEN CELL MOTILITY (MEMO) RELATED (INTERPROIPR002737) HAS 742 BLAST HITS TO 742 PROTEINS IN 323 SPECIES ARCHAE - 138 BACTERIA - 240 METAZOA - 132 FUNGI - 82 PLANTS - 26 VIRUSES - 0 OTHER EUKARYOTES - 124 (SOURCE NCBI BLINK)
AT2G36060

Predicted

two hybrid

FSW = 0.0133

Unknown

UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN
AT3G03080

Predicted

Synthetic Lethality

FSW = 0.0395

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT3G15470

Predicted

Synthetic Lethality

FSW = 0.0059

Unknown

WD-40 REPEAT FAMILY PROTEIN
AT3G21460

Predicted

synthetic growth defect

FSW = 0.1047

Unknown

ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE
AT3G24010

Predicted

synthetic growth defect

FSW = 0.1915

Unknown

ING1 (INHIBITOR OF GROWTH 1) DNA BINDING / METHYLATED HISTONE RESIDUE BINDING
AT3G25900

Predicted

synthetic growth defect

FSW = 0.2479

Unknown

HMT-1 HOMOCYSTEINE S-METHYLTRANSFERASE
AT3G27440

Predicted

synthetic growth defect

FSW = 0.1210

Unknown

URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE
AT3G53030

Predicted

synthetic growth defect

FSW = 0.1834

Unknown

SRPK4 (SER/ARG-RICH PROTEIN KINASE 4) KINASE/ PROTEIN KINASE
AT3G59020

Predicted

Affinity Capture-MS

FSW = 0.0099

Unknown

BINDING / PROTEIN TRANSPORTER
AT4G12620

Predicted

synthetic growth defect

FSW = 0.0264

Unknown

ORC1B (ORIGIN OF REPLICATION COMPLEX 1B) DNA BINDING / DOUBLE-STRANDED METHYLATED DNA BINDING / PROTEIN BINDING
AT4G18593

Predicted

two hybrid

FSW = 0.0075

Unknown

DUAL SPECIFICITY PROTEIN PHOSPHATASE-RELATED
AT4G22140

Predicted

synthetic growth defect

FSW = 0.0713

Unknown

DNA BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G24160

Predicted

two hybrid

FSW = 0.0956

Unknown

HYDROLASE ALPHA/BETA FOLD FAMILY PROTEIN
AT4G33950

Predicted

two hybrid

FSW = 0.0088

Unknown

OST1 (OPEN STOMATA 1) CALCIUM-DEPENDENT PROTEIN SERINE/THREONINE KINASE/ KINASE/ PROTEIN KINASE
AT5G20340

Predicted

two hybrid

FSW = 0.1937

Unknown

BG5 (BETA-13-GLUCANASE 5) GLUCAN 13-BETA-GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G37350

Predicted

two hybrid

FSW = 0.0158

Unknown

RIO1 FAMILY PROTEIN
AT5G48630

Predicted

two hybrid

FSW = 0.0066

Unknown

CYCLIN FAMILY PROTEIN
AT5G49970

Predicted

synthetic growth defect

FSW = 0.1554

Unknown

ATPPOX (A THALIANA PYRIDOXIN (PYRODOXAMINE) 5-PHOSPHATE OXIDASE) PYRIDOXAMINE-PHOSPHATE OXIDASE
AT5G51180

Predicted

two hybrid

FSW = 0.0462

Unknown

UNKNOWN PROTEIN
AT5G58180

Predicted

two hybrid

FSW = 0.0535

Unknown

ATYKT62
AT5G58380

Predicted

two hybrid

FSW = 0.0232

Unknown

SIP1 (SOS3-INTERACTING PROTEIN 1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G66630

Predicted

two hybrid

FSW = 0.0088

Unknown

DAR5 (DA1-RELATED PROTEIN 5) ZINC ION BINDING
AT5G67540

Predicted

two hybrid

FSW = 0.0633

Unknown

GLYCOSYL HYDROLASE FAMILY PROTEIN 43
AT1G69750

Predicted

Gene neighbors method

Phylogenetic profile method

FSW = 0.0118

Unknown

COX19 FAMILY PROTEIN

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454