Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G79930 - ( HSP91 ATP binding )
49 Proteins interacs with AT1G79930| Locus | Method | FSW  | Cellular Compartment Classification (C3) | Description |
|---|---|---|---|---|
AT4G14880
   | PredictedAffinity Capture-MS | FSW = 0.0103
| Class C:plasma membrane | OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1) CYSTEINE SYNTHASE |
| AT3G04120
| PredictedAffinity Capture-MS | FSW = 0.0536
| Class C:plasma membrane | GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1) GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (PHOSPHORYLATING)/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE |
| AT3G12580
| PredictedReconstituted ComplexAffinity Capture-MSAffinity Capture-WesternAffinity Capture-MSReconstituted Complexco-fractionationCo-fractionationReconstituted ComplexCo-purificationAffinity Capture-Westernbiochemical | FSW = 0.1143
| Class C:plasma membrane | HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING |
| AT1G20620
| PredictedSynthetic Rescue | FSW = 0.0673
| Class C:plasma membrane | CAT3 (CATALASE 3) CATALASE |
| AT3G08530
| PredictedAffinity Capture-MSAffinity Capture-MSinteraction prediction | FSW = 0.0143
| Class C:plasma membrane | CLATHRIN HEAVY CHAIN PUTATIVE |
| AT1G18080
| Predictedinteraction prediction | FSW = 0.0506
| Class C:plasma membrane | ATARCA NUCLEOTIDE BINDING |
| AT5G22060
| Predictedinterologs mappinginterologs mappingSynthetic Lethality | FSW = 0.0643
| Class C:plasma membrane | ATJ2 PROTEIN BINDING |
| AT5G62880
| PredictedSynthetic RescuePhenotypic Suppression | FSW = 0.0362
| Class C:plasma membrane | ARAC10 GTP BINDING |
| AT5G52640
| PredictedAffinity Capture-WesternAffinity Capture-MStwo hybridsynthetic growth defect | FSW = 0.0260
| Class C:plasma membrane | ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING |
| AT5G12370
| PredictedAffinity Capture-MS | FSW = 0.0145
| Class C:plasma membrane | SEC10 (EXOCYST COMPLEX COMPONENT SEC10) |
| AT2G30110
| PredictedAffinity Capture-MS | FSW = 0.0170
| Class C:plasma membrane | ATUBA1 UBIQUITIN ACTIVATING ENZYME/ UBIQUITIN-PROTEIN LIGASE |
| AT5G12480
| Predictedbiochemical | FSW = 0.0068
| Class C:plasma membrane | CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE |
| AT1G79920
| PredictedGene neighbors methodPhylogenetic profile method | FSW = 0.1889
| Class C:plasma membrane | ATP BINDING |
| AT4G02450
| Predictedin vivo | FSW = 0.0905
| Class C:plasma membrane | GLYCINE-RICH PROTEIN |
| AT1G62740
| Predictedsynthetic growth defectinterologs mapping | FSW = 0.1077
| Class C:plasma membrane | STRESS-INDUCIBLE PROTEIN PUTATIVE |
| AT2G42500
| PredictedAffinity Capture-MS | FSW = 0.0224
| Class C:plasma membrane | PP2A-4 HYDROLASE/ PROTEIN SERINE/THREONINE PHOSPHATASE |
| AT5G01820
| PredictedSynthetic Rescue | FSW = 0.0804
| Unknown | ATSR1 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
| AT5G36880
| PredictedAffinity Capture-MS | FSW = 0.0304
| Unknown | ACETYL-COA SYNTHETASE PUTATIVE / ACETATE-COA LIGASE PUTATIVE |
| AT3G11630
| PredictedAffinity Capture-MSAffinity Capture-MSinteraction prediction | FSW = 0.0294
| Unknown | 2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1) |
| AT3G55620
| PredictedAffinity Capture-MS | FSW = 0.0109
| Unknown | EMB1624 (EMBRYO DEFECTIVE 1624) RIBOSOME BINDING / TRANSLATION INITIATION FACTOR |
| AT2G47620
| PredictedAffinity Capture-MS | FSW = 0.0250
| Unknown | ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING |
| AT3G19840
| PredictedAffinity Capture-MS | FSW = 0.0237
| Unknown | FF DOMAIN-CONTAINING PROTEIN / WW DOMAIN-CONTAINING PROTEIN |
| AT4G38130
| PredictedAffinity Capture-Western | FSW = 0.0126
| Unknown | HD1 (HISTONE DEACETYLASE 1) BASAL TRANSCRIPTION REPRESSOR/ HISTONE DEACETYLASE/ PROTEIN BINDING |
| AT3G18130
| PredictedAffinity Capture-MS | FSW = 0.0405
| Unknown | RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C) NUCLEOTIDE BINDING |
| AT1G67970
| Predictedin vitroReconstituted Complex | FSW = 0.1029
| Unknown | AT-HSFA8 DNA BINDING / TRANSCRIPTION FACTOR |
| AT3G22830
| Predictedsynthetic growth defect | FSW = 0.1286
| Unknown | AT-HSFA6B DNA BINDING / TRANSCRIPTION FACTOR |
| AT1G70320
| PredictedSynthetic Rescue | FSW = 0.0309
| Unknown | UPL2 (UBIQUITIN-PROTEIN LIGASE 2) UBIQUITIN-PROTEIN LIGASE |
| AT2G36070
| PredictedReconstituted Complex | FSW = 0.0180
| Unknown | ATTIM44-2 PROTEIN-TRANSMEMBRANE TRANSPORTING ATPASE |
| AT3G25980
| PredictedSynthetic Lethality | FSW = 0.0228
| Unknown | MITOTIC SPINDLE CHECKPOINT PROTEIN PUTATIVE (MAD2) |
| AT4G26840
| PredictedAffinity Capture-MS | FSW = 0.0133
| Unknown | SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) PROTEIN BINDING / PROTEIN TAG |
| AT1G04730 | PredictedAffinity Capture-MS | FSW = 0.0675
| Unknown | AAA-TYPE ATPASE FAMILY PROTEIN |
| AT3G09350
| PredictedReconstituted ComplexAffinity Capture-Western | FSW = 0.0200
| Unknown | ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN |
| AT4G15802
| Predictedin vitroin vivo | FSW = 0.0667
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN CONTAINS INTERPRO DOMAIN/S HEAT SHOCK FACTOR BINDING 1 (INTERPROIPR009643) HAS 178 BLAST HITS TO 178 PROTEINS IN 62 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 122 FUNGI - 0 PLANTS - 37 VIRUSES - 0 OTHER EUKARYOTES - 19 (SOURCE NCBI BLINK) |
| AT4G30480
| PredictedReconstituted ComplexAffinity Capture-Western | FSW = 0.0587
| Unknown | TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN |
| AT5G25530
| PredictedReconstituted ComplexAffinity Capture-Western | FSW = 0.1118
| Unknown | DNAJ HEAT SHOCK PROTEIN PUTATIVE |
| AT1G54560 | PredictedbiochemicalAffinity Capture-WesternReconstituted ComplexReconstituted Complexbiochemicalbiochemicaltwo hybridReconstituted ComplexReconstituted Complextwo hybridReconstituted ComplexAffinity Capture-WesternReconstituted Complextwo hybridbiochemicalfluorescence acceptor donor pairfluorescence acceptor donor pair | FSW = 0.0419
| Unknown | XIE MOTOR/ PROTEIN BINDING |
| AT1G70290
| PredictedAffinity Capture-Westerntwo hybridReconstituted Complextwo hybridReconstituted ComplexReconstituted ComplexAffinity Capture-WesternReconstituted ComplexProtein-peptideAffinity Capture-MSPhenotypic Enhancement | FSW = 0.0260
| Unknown | ATTPS8 ALPHAALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE |
| AT1G49490
| PredictedAffinity Capture-MS | FSW = 0.0439
| Unknown | LEUCINE-RICH REPEAT FAMILY PROTEIN / EXTENSIN FAMILY PROTEIN |
| AT1G80410
| Predictedsynthetic growth defect | FSW = 0.0261
| Unknown | EMB2753 (EMBRYO DEFECTIVE 2753) BINDING |
| AT2G34357 | PredictedAffinity Capture-MS | FSW = 0.0045
| Unknown | BINDING |
| AT2G39770
| PredictedAffinity Capture-MS | FSW = 0.0351
| Unknown | CYT1 (CYTOKINESIS DEFECTIVE 1) MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE/ NUCLEOTIDYLTRANSFERASE |
| AT3G26020
| PredictedAffinity Capture-MS | FSW = 0.0337
| Unknown | SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B PUTATIVE |
| AT5G07760 | Predictedinterologs mapping | FSW = 0.0515
| Unknown | FORMIN HOMOLOGY 2 DOMAIN-CONTAINING PROTEIN / FH2 DOMAIN-CONTAINING PROTEIN |
| AT5G10270
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0224
| Unknown | CDKC1 (CYCLIN-DEPENDENT KINASE C1) KINASE |
| AT5G13780
| Predictedsynthetic growth defect | FSW = 0.0297
| Unknown | GCN5-RELATED N-ACETYLTRANSFERASE PUTATIVE |
| AT5G64760
| Predictedbiochemical | FSW = 0.0069
| Unknown | RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B) |
| AT5G02150
| Predictedinterologs mapping | FSW = 0.0690
| Unknown | BINDING |
| AT2G04660
| Predictedtwo hybrid | FSW = 0.0252
| Unknown | APC2 UBIQUITIN PROTEIN LIGASE BINDING / UBIQUITIN-PROTEIN LIGASE |
| AT1G11660
| PredictedGene neighbors methodPhylogenetic profile method | FSW = 0.2025
| Unknown | HEAT SHOCK PROTEIN PUTATIVE |
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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
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