Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G80050 - ( APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) adenine phosphoribosyltransferase/ phosphate transmembrane transporter )

109 Proteins interacs with AT1G80050
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G09200

Predicted

Affinity Capture-Western

Synthetic Lethality

FSW = 0.0381

Class C:

plasma membrane

60S ACIDIC RIBOSOMAL PROTEIN P0 (RPP0B)
AT3G08710

Predicted

Synthetic Lethality

FSW = 0.0401

Class C:

plasma membrane

ATH9 (THIOREDOXIN H-TYPE 9)
AT1G11260

Predicted

Synthetic Lethality

FSW = 0.0285

Class C:

plasma membrane

STP1 (SUGAR TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G07890

Predicted

Synthetic Lethality

FSW = 0.0684

Class C:

plasma membrane

APX1 (ASCORBATE PEROXIDASE 1) L-ASCORBATE PEROXIDASE
AT3G22890

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.3186

Class C:

plasma membrane

APS1 (ATP SULFURYLASE 1) SULFATE ADENYLYLTRANSFERASE (ATP)
AT1G16030

Predicted

Synthetic Lethality

FSW = 0.0110

Class C:

plasma membrane

HSP70B (HEAT SHOCK PROTEIN 70B) ATP BINDING
AT5G60540

Predicted

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.4542

Class C:

plasma membrane

PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT5G64740

Predicted

Synthetic Lethality

FSW = 0.0801

Class C:

plasma membrane

CESA6 (CELLULOSE SYNTHASE 6) CELLULOSE SYNTHASE/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G27450

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.0390

Class C:

plasma membrane

APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1) ADENINE PHOSPHORIBOSYLTRANSFERASE
AT2G32670

Predicted

Phenotypic Suppression

FSW = 0.1669

Class C:

plasma membrane

ATVAMP725
AT4G08800Predicted

Synthetic Lethality

FSW = 0.1756

Class C:

plasma membrane

PROTEIN KINASE PUTATIVE
AT4G33090

Predicted

Phenotypic Suppression

FSW = 0.1161

Class C:

plasma membrane

APM1 (AMINOPEPTIDASE M1) AMINOPEPTIDASE
AT2G37790

Predicted

Phenotypic Suppression

FSW = 0.2179

Class C:

plasma membrane

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT5G58430

Predicted

Synthetic Lethality

FSW = 0.0833

Class C:

plasma membrane

ATEXO70B1 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN B1) PROTEIN BINDING
AT3G25540

Predicted

Synthetic Lethality

FSW = 0.0400

Class C:

plasma membrane

LAG1
AT4G21680

Predicted

Phenotypic Suppression

FSW = 0.1508

Class C:

plasma membrane

PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN
AT5G09590

Predicted

Phenotypic Suppression

FSW = 0.1862

Unknown

MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT4G16660

Predicted

Phenotypic Suppression

FSW = 0.1789

Unknown

HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE
AT1G20260

Predicted

Phenotypic Suppression

FSW = 0.2230

Unknown

HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT4G09720

Predicted

Synthetic Lethality

FSW = 0.0198

Unknown

RAS-RELATED GTP-BINDING PROTEIN PUTATIVE
AT3G57990

Predicted

Synthetic Lethality

FSW = 0.1347

Unknown

UNKNOWN PROTEIN
AT3G22110

Predicted

Phenotypic Suppression

FSW = 0.0549

Unknown

PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT1G74560

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.3460

Unknown

NRP1 (NAP1-RELATED PROTEIN 1) DNA BINDING / CHROMATIN BINDING / HISTONE BINDING
AT4G33650

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2414

Unknown

DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP BINDING / GTPASE/ PHOSPHOINOSITIDE BINDING
AT1G55920

Predicted

Synthetic Lethality

FSW = 0.1232

Unknown

ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE
AT3G55400

Predicted

Phenotypic Suppression

FSW = 0.0662

Unknown

OVA1 (OVULE ABORTION 1) ATP BINDING / AMINOACYL-TRNA LIGASE/ METHIONINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT1G56050

Predicted

Phenotypic Enhancement

FSW = 0.1866

Unknown

GTP-BINDING PROTEIN-RELATED
AT5G51820

Predicted

Affinity Capture-MS

Affinity Capture-MS

Phenotypic Suppression

Affinity Capture-Western

FSW = 0.5779

Unknown

PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE
AT2G33340

Predicted

Synthetic Lethality

FSW = 0.0069

Unknown

NUCLEOTIDE BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G25400

Predicted

Synthetic Lethality

FSW = 0.2161

Unknown

PHOSPHATE TRANSLOCATOR-RELATED
AT3G11630

Predicted

Synthetic Lethality

FSW = 0.0177

Unknown

2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT1G48860

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2719

Unknown

3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE PUTATIVE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PUTATIVE / EPSP SYNTHASE PUTATIVE
AT3G60180

Predicted

Synthetic Lethality

FSW = 0.0534

Unknown

URIDYLATE KINASE PUTATIVE / URIDINE MONOPHOSPHATE KINASE PUTATIVE / UMP KINASE PUTATIVE
AT1G76300

Predicted

Phenotypic Suppression

FSW = 0.1046

Unknown

SMD3 (SNRNP CORE PROTEIN SMD3)
AT1G79020

Predicted

interologs mapping

FSW = 0.0991

Unknown

TRANSCRIPTION FACTOR-RELATED
AT3G52250

Predicted

Phenotypic Suppression

FSW = 0.1635

Unknown

DNA BINDING / TRANSCRIPTION FACTOR
AT4G25340

Predicted

Phenotypic Suppression

FSW = 0.1736

Unknown

IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT3G14270

Predicted

Phenotypic Suppression

FSW = 0.0170

Unknown

PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE FAMILY PROTEIN
AT2G30160

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.3074

Unknown

MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT3G18480

Predicted

Phenotypic Enhancement

FSW = 0.0989

Unknown

ATCASP (ARABIDOPSIS THALIANA CCAAT-DISPLACEMENT PROTEIN ALTERNATIVELY SPLICED PRODUCT)
AT1G64880

Predicted

Phenotypic Suppression

FSW = 0.0595

Unknown

RIBOSOMAL PROTEIN S5 FAMILY PROTEIN
AT5G24090

Predicted

Synthetic Lethality

FSW = 0.1084

Unknown

ACIDIC ENDOCHITINASE (CHIB1)
AT3G07140

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2185

Unknown

GPI TRANSAMIDASE COMPONENT GPI16 SUBUNIT FAMILY PROTEIN
AT2G05170

Predicted

Phenotypic Suppression

FSW = 0.0314

Unknown

ATVPS11 BINDING / PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING
AT2G42120

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1399

Unknown

POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT) DNA BINDING / DNA-DIRECTED DNA POLYMERASE
AT4G22570

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.0725

Unknown

APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3) ADENINE PHOSPHORIBOSYLTRANSFERASE
AT4G39200

Predicted

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.3119

Unknown

40S RIBOSOMAL PROTEIN S25 (RPS25E)
AT3G60360

Predicted

Phenotypic Suppression

FSW = 0.2295

Unknown

EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14)
AT3G15990

Predicted

Synthetic Lethality

FSW = 0.0332

Unknown

SULTR34 (SULFATE TRANSPORTER 34) SULFATE TRANSMEMBRANE TRANSPORTER
AT4G16420

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.1549

Unknown

ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR
AT1G08940

Predicted

Synthetic Lethality

FSW = 0.0591

Unknown

PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE FAMILY PROTEIN
AT1G10980

Predicted

Synthetic Lethality

FSW = 0.1221

Unknown

INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN VACUOLE EXPRESSED IN 8 PLANT STRUCTURES EXPRESSED DURING 6 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G616701) HAS 482 BLAST HITS TO 481 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 255 FUNGI - 99 PLANTS - 97 VIRUSES - 0 OTHER EUKARYOTES - 31 (SOURCE NCBI BLINK)
AT1G13580

Predicted

Phenotypic Enhancement

synthetic growth defect

FSW = 0.1520

Unknown

LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)
AT1G19750

Predicted

Synthetic Lethality

FSW = 0.2159

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G20693

Predicted

Phenotypic Suppression

FSW = 0.1906

Unknown

HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G23460

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2315

Unknown

POLYGALACTURONASE
AT1G27320

Predicted

Phenotypic Suppression

FSW = 0.1596

Unknown

AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) CYTOKININ RECEPTOR/ OSMOSENSOR/ PROTEIN HISTIDINE KINASE
AT1G33770

Predicted

Synthetic Lethality

FSW = 0.0225

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT1G35350

Predicted

Synthetic Lethality

Phenotypic Enhancement

synthetic growth defect

FSW = 0.2343

Unknown

LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK)
AT1G43910

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1979

Unknown

AAA-TYPE ATPASE FAMILY PROTEIN
AT1G52500

Predicted

Affinity Capture-MS

Affinity Capture-Western

Phenotypic Suppression

Affinity Capture-MS

FSW = 0.5584

Unknown

ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G11510

Predicted

synthetic growth defect

FSW = 0.2396

Unknown

DNA-BINDING STOREKEEPER PROTEIN-RELATED
AT1G15440

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0531

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G25155Predicted

synthetic growth defect

FSW = 0.1867

Unknown

ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT1G68530

Predicted

Phenotypic Enhancement

FSW = 0.0229

Unknown

KCS6 (3-KETOACYL-COA SYNTHASE 6) CATALYTIC/ TRANSFERASE TRANSFERRING ACYL GROUPS OTHER THAN AMINO-ACYL GROUPS
AT2G01600

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2801

Unknown

EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN
AT2G32160

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1726

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S N2227-LIKE (INTERPROIPR012901) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G321701) HAS 325 BLAST HITS TO 315 PROTEINS IN 141 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 95 FUNGI - 130 PLANTS - 30 VIRUSES - 0 OTHER EUKARYOTES - 70 (SOURCE NCBI BLINK)
AT2G48100

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Phenotypic Suppression

FSW = 0.6168

Unknown

EXONUCLEASE FAMILY PROTEIN
AT3G13720

Predicted

Synthetic Lethality

Phenotypic Enhancement

interologs mapping

FSW = 0.1616

Unknown

PRA8
AT3G22290

Predicted

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

FSW = 0.2152

Unknown

UNKNOWN PROTEIN
AT3G59540Predicted

Affinity Capture-MS

Affinity Capture-MS

two hybrid

Affinity Capture-Western

Phenotypic Suppression

FSW = 0.5977

Unknown

60S RIBOSOMAL PROTEIN L38 (RPL38B)
AT4G19880

Predicted

Synthetic Lethality

FSW = 0.1368

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RESPONSE TO CADMIUM ION LOCATED IN CHLOROPLAST EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S GLUTATHIONE S-TRANSFERASE PREDICTED (INTERPROIPR016639) GLUTATHIONE S-TRANSFERASE C-TERMINAL (INTERPROIPR004046) GLUTATHIONE S-TRANSFERASE C-TERMINAL-LIKE (INTERPROIPR010987) GLUTATHIONE S-TRANSFERASE/CHLORIDE CHANNEL C-TERMINAL (INTERPROIPR017933) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G450201) HAS 1635 BLAST HITS TO 1635 PROTEINS IN 489 SPECIES ARCHAE - 12 BACTERIA - 905 METAZOA - 23 FUNGI - 158 PLANTS - 57 VIRUSES - 0 OTHER EUKARYOTES - 480 (SOURCE NCBI BLINK)
AT4G25950

Predicted

Phenotypic Suppression

FSW = 0.0979

Unknown

VATG3 (VACUOLAR ATP SYNTHASE G3) HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT4G27130

Predicted

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

FSW = 0.3162

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT4G27960

Predicted

Synthetic Lethality

FSW = 0.0715

Unknown

UBC9 (UBIQUITIN CONJUGATING ENZYME 9) UBIQUITIN-PROTEIN LIGASE
AT4G32930

Predicted

Synthetic Lethality

FSW = 0.1250

Unknown

UNKNOWN PROTEIN
AT5G01430

Predicted

Phenotypic Suppression

FSW = 0.1333

Unknown

GOT1-LIKE FAMILY PROTEIN
AT5G14060

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2729

Unknown

CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE
AT5G42720

Predicted

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.1622

Unknown

GLYCOSYL HYDROLASE FAMILY 17 PROTEIN
AT1G80710

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.0767

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G15790

Predicted

Synthetic Lethality

FSW = 0.0226

Unknown

SQN (SQUINT) PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT2G15910

Predicted

Phenotypic Enhancement

FSW = 0.1431

Unknown

CSL ZINC FINGER DOMAIN-CONTAINING PROTEIN
AT2G21250

Predicted

Phenotypic Suppression

FSW = 0.0190

Unknown

MANNOSE 6-PHOSPHATE REDUCTASE (NADPH-DEPENDENT) PUTATIVE
AT2G31260

Predicted

Synthetic Lethality

Phenotypic Suppression

FSW = 0.1346

Unknown

APG9 (AUTOPHAGY 9)
AT2G37420

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.3393

Unknown

KINESIN MOTOR PROTEIN-RELATED
AT2G41340

Predicted

Synthetic Lethality

FSW = 0.0716

Unknown

RPB5D (RNA POLYMERASE II FIFTH LARGEST SUBUNIT D) DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT2G47090

Predicted

Synthetic Lethality

FSW = 0.0539

Unknown

NUCLEIC ACID BINDING / PROTEIN BINDING / ZINC ION BINDING
AT2G47830

Predicted

Synthetic Lethality

FSW = 0.0939

Unknown

CATION EFFLUX FAMILY PROTEIN / METAL TOLERANCE PROTEIN PUTATIVE (MTPC1)
AT3G11230

Predicted

Phenotypic Suppression

FSW = 0.2487

Unknown

YIPPEE FAMILY PROTEIN
AT3G11290

Predicted

Synthetic Lethality

FSW = 0.1026

Unknown

UNKNOWN PROTEIN
AT3G12200

Predicted

Phenotypic Suppression

FSW = 0.0831

Unknown

ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G18660

Predicted

Phenotypic Suppression

FSW = 0.1159

Unknown

PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT3G26690

Predicted

Synthetic Lethality

FSW = 0.0698

Unknown

ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13) BIS(5-ADENOSYL)-PENTAPHOSPHATASE/ HYDROLASE
AT3G29070

Predicted

Synthetic Lethality

FSW = 0.0300

Unknown

PROTEIN TRANSMEMBRANE TRANSPORTER
AT3G57140

Predicted

Synthetic Lethality

FSW = 0.0342

Unknown

PATATIN-RELATED
AT3G61740

Predicted

Synthetic Lethality

FSW = 0.0571

Unknown

SDG14 (SET DOMAIN PROTEIN 14) DNA BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G00800Predicted

Synthetic Lethality

FSW = 0.1788

Unknown

BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G19560

Predicted

Synthetic Lethality

FSW = 0.2037

Unknown

CYCT12 CYCLIN-DEPENDENT PROTEIN KINASE
AT4G20330

Predicted

Synthetic Lethality

FSW = 0.0327

Unknown

TRANSCRIPTION INITIATION FACTOR-RELATED
AT4G21560

Predicted

Synthetic Lethality

FSW = 0.0378

Unknown

VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1) TRANSPORTER
AT4G21800

Predicted

Synthetic Lethality

FSW = 0.0046

Unknown

QQT2 (QUATRE-QUART2) ATP BINDING / NUCLEOTIDE BINDING
AT4G23895

Predicted

Synthetic Lethality

FSW = 0.0833

Unknown

PLECKSTRIN HOMOLOGY (PH) DOMAIN-CONTAINING PROTEIN-RELATED
AT4G24160

Predicted

Phenotypic Enhancement

FSW = 0.1090

Unknown

HYDROLASE ALPHA/BETA FOLD FAMILY PROTEIN
AT4G34370

Predicted

Synthetic Lethality

FSW = 0.0381

Unknown

ARI1 (ARIADNE) PROTEIN BINDING / ZINC ION BINDING
AT4G36070

Predicted

Phenotypic Suppression

FSW = 0.0230

Unknown

CPK18 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G63650

Predicted

Synthetic Lethality

FSW = 0.0868

Unknown

SNRK25 (SNF1-RELATED PROTEIN KINASE 25) KINASE
AT5G64760

Predicted

Phenotypic Suppression

FSW = 0.1833

Unknown

RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)
AT5G11160

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.0725

Unknown

APT5 (ADENINE PHOSPHORIBOSYLTRANSFERASE 5) ADENINE PHOSPHORIBOSYLTRANSFERASE
AT4G12440

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.0362

Unknown

ADENINE PHOSPHORIBOSYLTRANSFERASE PUTATIVE

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Fasta sequences:

Proteins

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Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454