Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT2G19980 - ( allergen V5/Tpx-1-related family protein )

124 Proteins interacs with AT2G19980
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT2G01630

Predicted

Phenotypic Suppression

FSW = 0.0801

Class C:

extracellular

GLYCOSYL HYDROLASE FAMILY 17 PROTEIN / BETA-13-GLUCANASE PUTATIVE
AT5G57625

Predicted

Affinity Capture-MS

FSW = 0.0049

Class C:

extracellular

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT4G33710

Predicted

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.1100

Class C:

extracellular

PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT5G09590

Predicted

Phenotypic Enhancement

FSW = 0.1820

Unknown

MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT4G16660

Predicted

Phenotypic Enhancement

FSW = 0.2620

Unknown

HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE
AT1G20260

Predicted

Phenotypic Enhancement

Affinity Capture-MS

FSW = 0.2205

Unknown

HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT1G07810

Predicted

Phenotypic Enhancement

FSW = 0.0537

Unknown

ECA1 (ER-TYPE CA2+-ATPASE 1) CALCIUM-TRANSPORTING ATPASE
AT4G12650

Predicted

Phenotypic Suppression

FSW = 0.0713

Unknown

LOCATED IN INTEGRAL TO MEMBRANE GOLGI APPARATUS PLASMA MEMBRANE VACUOLE EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NONASPANIN (TM9SF) (INTERPROIPR004240) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G351601) HAS 983 BLAST HITS TO 980 PROTEINS IN 161 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 434 FUNGI - 144 PLANTS - 228 VIRUSES - 0 OTHER EUKARYOTES - 177 (SOURCE NCBI BLINK)
AT4G21980

Predicted

Phenotypic Suppression

FSW = 0.1180

Unknown

APG8A (AUTOPHAGY 8A) APG8 ACTIVATING ENZYME/ APG8-SPECIFIC PROTEASE/ ATG8 LIGASE
AT2G01690

Predicted

Synthetic Lethality

FSW = 0.0117

Unknown

BINDING
AT3G22110

Predicted

Phenotypic Enhancement

FSW = 0.1141

Unknown

PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT5G01820

Predicted

Affinity Capture-MS

FSW = 0.0045

Unknown

ATSR1 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G13450

Predicted

Affinity Capture-Western

Affinity Capture-Western

two hybrid

FSW = 0.1397

Unknown

ATP SYNTHASE DELTA CHAIN MITOCHONDRIAL PUTATIVE / H(+)-TRANSPORTING TWO-SECTOR ATPASE DELTA (OSCP) SUBUNIT PUTATIVE
AT1G74560

Predicted

Phenotypic Enhancement

FSW = 0.1705

Unknown

NRP1 (NAP1-RELATED PROTEIN 1) DNA BINDING / CHROMATIN BINDING / HISTONE BINDING
AT3G44310

Predicted

Phenotypic Enhancement

FSW = 0.0458

Unknown

NIT1 INDOLE-3-ACETONITRILE NITRILASE/ INDOLE-3-ACETONITRILE NITRILE HYDRATASE/ NITRILASE
AT1G07890

Predicted

Affinity Capture-MS

FSW = 0.0609

Unknown

APX1 (ASCORBATE PEROXIDASE 1) L-ASCORBATE PEROXIDASE
AT3G22890

Predicted

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

FSW = 0.2077

Unknown

APS1 (ATP SULFURYLASE 1) SULFATE ADENYLYLTRANSFERASE (ATP)
AT4G33650

Predicted

Phenotypic Enhancement

FSW = 0.1523

Unknown

DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP BINDING / GTPASE/ PHOSPHOINOSITIDE BINDING
AT5G36790

Predicted

Affinity Capture-MS

FSW = 0.0675

Unknown

PHOSPHOGLYCOLATE PHOSPHATASE PUTATIVE
AT3G20550

Predicted

Phenotypic Suppression

FSW = 0.0094

Unknown

DDL (DAWDLE)
AT3G55400

Predicted

Phenotypic Enhancement

FSW = 0.0671

Unknown

OVA1 (OVULE ABORTION 1) ATP BINDING / AMINOACYL-TRNA LIGASE/ METHIONINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT3G56160Predicted

Phenotypic Enhancement

FSW = 0.0605

Unknown

BILE ACIDSODIUM SYMPORTER
AT4G13590

Predicted

Affinity Capture-MS

FSW = 0.0421

Unknown

UNKNOWN PROTEIN
AT3G44610

Predicted

Affinity Capture-MS

Co-purification

FSW = 0.0794

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT1G56050

Predicted

Phenotypic Suppression

FSW = 0.1536

Unknown

GTP-BINDING PROTEIN-RELATED
AT2G45300

Predicted

Phenotypic Enhancement

FSW = 0.0937

Unknown

3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE / EPSP SYNTHASE
AT5G15450

Predicted

Phenotypic Enhancement

FSW = 0.1673

Unknown

CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT5G51820

Predicted

Phenotypic Suppression

FSW = 0.2255

Unknown

PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE
AT1G48860

Predicted

Phenotypic Enhancement

FSW = 0.1976

Unknown

3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE PUTATIVE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PUTATIVE / EPSP SYNTHASE PUTATIVE
AT5G49030

Predicted

Affinity Capture-MS

FSW = 0.0617

Unknown

OVA2 (OVULE ABORTION 2) ATP BINDING / AMINOACYL-TRNA LIGASE/ CATALYTIC/ ISOLEUCINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT3G54670

Predicted

Phenotypic Suppression

FSW = 0.0781

Unknown

TTN8 (TITAN8) ATP BINDING / TRANSPORTER
AT5G60540

Predicted

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-MS

Phenotypic Enhancement

Affinity Capture-MS

Affinity Capture-Western

Synthetic Lethality

FSW = 0.3510

Unknown

PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT5G58640

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.1475

Unknown

SELENOPROTEIN-RELATED
AT1G32090

Predicted

Phenotypic Enhancement

FSW = 0.0751

Unknown

EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT5G26340

Predicted

Phenotypic Suppression

FSW = 0.0469

Unknown

MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT4G33090

Predicted

Phenotypic Suppression

FSW = 0.1528

Unknown

APM1 (AMINOPEPTIDASE M1) AMINOPEPTIDASE
AT4G04720

Predicted

Affinity Capture-MS

FSW = 0.0564

Unknown

CPK21 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G02450

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.0978

Unknown

GLYCINE-RICH PROTEIN
AT4G18800

Predicted

Phenotypic Enhancement

FSW = 0.1569

Unknown

ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D) GTP BINDING
AT4G28860

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Phenotypic Enhancement

FSW = 0.1757

Unknown

CKL4 (CASEIN KINASE I-LIKE 4) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G41370

Predicted

Affinity Capture-Western

Affinity Capture-MS

FSW = 0.0684

Unknown

XPB1 (ARABIDOPSIS HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1) ATP BINDING / ATP-DEPENDENT DNA HELICASE/ ATP-DEPENDENT HELICASE/ DNA BINDING / HELICASE/ HYDROLASE/ NUCLEIC ACID BINDING
AT1G03930

Predicted

Affinity Capture-MS

FSW = 0.0193

Unknown

ADK1 (DUAL SPECIFICITY KINASE 1) KINASE/ PROTEIN SERINE/THREONINE/TYROSINE KINASE
AT1G76300

Predicted

Phenotypic Suppression

FSW = 0.0698

Unknown

SMD3 (SNRNP CORE PROTEIN SMD3)
AT3G13445

Predicted

Phenotypic Enhancement

FSW = 0.0892

Unknown

TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT3G52250

Predicted

Phenotypic Suppression

FSW = 0.2378

Unknown

DNA BINDING / TRANSCRIPTION FACTOR
AT5G37720

Predicted

Affinity Capture-MS

FSW = 0.0104

Unknown

RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE
AT3G57300

Predicted

Phenotypic Suppression

FSW = 0.0256

Unknown

INO80 (INO80 ORTHOLOG) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT4G25340

Predicted

Phenotypic Enhancement

FSW = 0.2513

Unknown

IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT5G40650

Predicted

Affinity Capture-MS

FSW = 0.0165

Unknown

SDH2-2 ELECTRON CARRIER/ SUCCINATE DEHYDROGENASE
AT5G47630

Predicted

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.1410

Unknown

MTACP3 (MITOCHONDRIAL ACYL CARRIER PROTEIN 3) ACYL CARRIER/ COFACTOR BINDING
AT2G17130

Predicted

Affinity Capture-MS

FSW = 0.0207

Unknown

IDH2 (ISOCITRATE DEHYDROGENASE SUBUNIT 2) ISOCITRATE DEHYDROGENASE (NAD+)/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT3G49920

Predicted

Phenotypic Suppression

FSW = 0.1397

Unknown

VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5) VOLTAGE-GATED ANION CHANNEL
AT2G30160

Predicted

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.3493

Unknown

MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT5G08335

Predicted

Affinity Capture-MS

FSW = 0.0581

Unknown

ATSTE14B PROTEIN-S-ISOPRENYLCYSTEINE O-METHYLTRANSFERASE
AT4G39200

Predicted

Synthetic Lethality

Phenotypic Enhancement

Synthetic Lethality

Affinity Capture-MS

FSW = 0.3554

Unknown

40S RIBOSOMAL PROTEIN S25 (RPS25E)
AT2G43460

Predicted

Affinity Capture-MS

FSW = 0.0268

Unknown

60S RIBOSOMAL PROTEIN L38 (RPL38A)
AT2G29540

Predicted

Affinity Capture-MS

FSW = 0.1581

Unknown

ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT2G05170

Predicted

Phenotypic Enhancement

FSW = 0.0951

Unknown

ATVPS11 BINDING / PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING
AT4G17190

Predicted

Affinity Capture-MS

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2162

Unknown

FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT1G11510

Predicted

Affinity Capture-MS

Affinity Capture-MS

Co-purification

Co-purification

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

synthetic growth defect

Affinity Capture-Western

Co-purification

FSW = 0.1827

Unknown

DNA-BINDING STOREKEEPER PROTEIN-RELATED
AT1G20693

Predicted

Phenotypic Enhancement

FSW = 0.2647

Unknown

HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G26320

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-MS

Synthetic Lethality

Co-purification

FSW = 0.1800

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT1G26690

Predicted

Phenotypic Enhancement

FSW = 0.1242

Unknown

EMP24/GP25L/P24 FAMILY PROTEIN
AT1G27320

Predicted

Phenotypic Suppression

FSW = 0.0912

Unknown

AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) CYTOKININ RECEPTOR/ OSMOSENSOR/ PROTEIN HISTIDINE KINASE
AT1G02100

Predicted

Phenotypic Suppression

FSW = 0.1176

Unknown

LEUCINE CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
AT1G10210

Predicted

Phenotypic Suppression

FSW = 0.0581

Unknown

ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE
AT1G11755

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.1633

Unknown

LEW1 (LEAF WILTING 1) DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE
AT1G23460

Predicted

Phenotypic Enhancement

FSW = 0.2211

Unknown

POLYGALACTURONASE
AT1G25155Predicted

Phenotypic Enhancement

FSW = 0.1847

Unknown

ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT1G27080

Predicted

two hybrid

FSW = 0.0371

Unknown

NRT16 (NITRATE TRANSPORTER 16) LOW AFFINITY NITRATE TRANSMEMBRANE TRANSPORTER/ TRANSPORTER
AT1G43910

Predicted

Phenotypic Enhancement

FSW = 0.1025

Unknown

AAA-TYPE ATPASE FAMILY PROTEIN
AT1G52500

Predicted

Phenotypic Suppression

FSW = 0.2262

Unknown

ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G55300

Predicted

Phenotypic Enhancement

FSW = 0.2662

Unknown

TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G68530

Predicted

Affinity Capture-MS

FSW = 0.0809

Unknown

KCS6 (3-KETOACYL-COA SYNTHASE 6) CATALYTIC/ TRANSFERASE TRANSFERRING ACYL GROUPS OTHER THAN AMINO-ACYL GROUPS
AT1G72340

Predicted

Synthetic Lethality

FSW = 0.0081

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR 2B FAMILY PROTEIN / EIF-2B FAMILY PROTEIN
AT2G03130

Predicted

Phenotypic Enhancement

FSW = 0.2581

Unknown

RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G20290

Predicted

Affinity Capture-Western

Affinity Capture-MS

FSW = 0.0906

Unknown

XIG MOTOR/ PROTEIN BINDING
AT2G30800

Predicted

Phenotypic Suppression

FSW = 0.0914

Unknown

HVT1 (HELICASE IN VASCULAR TISSUE AND TAPETUM) ATP BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G31020

Predicted

Affinity Capture-MS

FSW = 0.0433

Unknown

ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A) OXYSTEROL BINDING
AT2G34250

Predicted

interologs mapping

FSW = 0.0186

Unknown

PROTEIN TRANSPORT PROTEIN SEC61 PUTATIVE
AT2G34750

Predicted

Phenotypic Enhancement

FSW = 0.1773

Unknown

RNA POLYMERASE I SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3 FAMILY PROTEIN
AT2G38490

Predicted

Phenotypic Suppression

FSW = 0.0859

Unknown

CIPK22 (CBL-INTERACTING PROTEIN KINASE 22) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT2G48100

Predicted

Phenotypic Enhancement

FSW = 0.2167

Unknown

EXONUCLEASE FAMILY PROTEIN
AT3G09640

Predicted

Phenotypic Enhancement

FSW = 0.1489

Unknown

APX2 (ASCORBATE PEROXIDASE 2) L-ASCORBATE PEROXIDASE
AT3G09700

Predicted

Phenotypic Enhancement

FSW = 0.0334

Unknown

DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT3G11290

Predicted

Phenotypic Suppression

FSW = 0.1312

Unknown

UNKNOWN PROTEIN
AT3G13720

Predicted

Phenotypic Enhancement

FSW = 0.0806

Unknown

PRA8
AT3G16565

Predicted

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Reconstituted Complex

interologs mapping

FSW = 0.0334

Unknown

ATP BINDING / ALANINE-TRNA LIGASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT3G18660

Predicted

Phenotypic Suppression

FSW = 0.1440

Unknown

PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT3G22290

Predicted

Phenotypic Enhancement

FSW = 0.2126

Unknown

UNKNOWN PROTEIN
AT3G49420Predicted

Affinity Capture-Western

Affinity Capture-MS

FSW = 0.0423

Unknown

GOT1-LIKE FAMILY PROTEIN
AT3G59540Predicted

Phenotypic Suppression

FSW = 0.2548

Unknown

60S RIBOSOMAL PROTEIN L38 (RPL38B)
AT4G00980

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0362

Unknown

ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN
AT4G04695

Predicted

Phenotypic Enhancement

FSW = 0.1377

Unknown

CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G04700

Predicted

Affinity Capture-MS

FSW = 0.1288

Unknown

CPK27 ATP BINDING / CALCIUM ION BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G10130

Predicted

Phenotypic Suppression

FSW = 0.0037

Unknown

DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT4G10360

Predicted

Phenotypic Suppression

FSW = 0.0617

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRAM LAG1 AND CLN8 HOMOLOGY (INTERPROIPR006634) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G313002) HAS 453 BLAST HITS TO 451 PROTEINS IN 101 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 225 FUNGI - 97 PLANTS - 91 VIRUSES - 3 OTHER EUKARYOTES - 37 (SOURCE NCBI BLINK)
AT4G13020

Predicted

Phenotypic Enhancement

FSW = 0.2454

Unknown

MHK ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G35520

Predicted

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.0978

Unknown

MLH3 (MUTL PROTEIN HOMOLOG 3) ATP BINDING / MISMATCHED DNA BINDING
AT5G04800

Predicted

Phenotypic Enhancement

FSW = 0.1674

Unknown

40S RIBOSOMAL PROTEIN S17 (RPS17D)
AT5G13860

Predicted

Phenotypic Enhancement

Affinity Capture-Western

FSW = 0.1330

Unknown

ELC-LIKE (ELCH-LIKE) SMALL CONJUGATING PROTEIN LIGASE
AT5G14060

Predicted

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.3380

Unknown

CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE
AT5G14180

Predicted

Phenotypic Enhancement

FSW = 0.1381

Unknown

MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1) CATALYTIC
AT5G16040

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0651

Unknown

REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN
AT5G16170

Predicted

Phenotypic Suppression

FSW = 0.0553

Unknown

UNKNOWN PROTEIN
AT5G17330

Predicted

Phenotypic Suppression

FSW = 0.0079

Unknown

GAD CALMODULIN BINDING / GLUTAMATE DECARBOXYLASE
AT5G17860

Predicted

Phenotypic Enhancement

FSW = 0.0816

Unknown

CAX7 (CALCIUM EXCHANGER 7) CALCIUMSODIUM ANTIPORTER/ CATIONCATION ANTIPORTER
AT5G24840

Predicted

Synthetic Rescue

Synthetic Rescue

FSW = 0.1433

Unknown

TRNA (GUANINE-N7-)-METHYLTRANSFERASE
AT5G42720

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2491

Unknown

GLYCOSYL HYDROLASE FAMILY 17 PROTEIN
AT5G59850Predicted

Affinity Capture-MS

FSW = 0.0256

Unknown

40S RIBOSOMAL PROTEIN S15A (RPS15AF)
AT5G64760

Predicted

Phenotypic Enhancement

FSW = 0.2542

Unknown

RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)
AT2G37420

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2896

Unknown

KINESIN MOTOR PROTEIN-RELATED
AT2G37670

Predicted

Affinity Capture-MS

FSW = 0.1401

Unknown

WD-40 REPEAT FAMILY PROTEIN
AT2G47760

Predicted

Phenotypic Enhancement

FSW = 0.0886

Unknown

ALG3 ALPHA-13-MANNOSYLTRANSFERASE/ CATALYTIC
AT3G06483

Predicted

Phenotypic Enhancement

FSW = 0.1421

Unknown

PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE
AT3G12200

Predicted

Phenotypic Enhancement

FSW = 0.1358

Unknown

ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G58180

Predicted

Affinity Capture-MS

FSW = 0.0355

Unknown

PBS LYASE HEAT-LIKE REPEAT-CONTAINING PROTEIN
AT4G00800Predicted

Phenotypic Enhancement

FSW = 0.1606

Unknown

BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G00810

Predicted

Synthetic Lethality

Affinity Capture-MS

FSW = 0.0508

Unknown

60S ACIDIC RIBOSOMAL PROTEIN P1 (RPP1B)
AT5G01770

Predicted

Phenotypic Enhancement

FSW = 0.1928

Unknown

RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING
AT5G15070

Predicted

Affinity Capture-MS

FSW = 0.0749

Unknown

ACID PHOSPHATASE/ OXIDOREDUCTASE/ TRANSITION METAL ION BINDING
AT5G49970

Predicted

Phenotypic Enhancement

FSW = 0.2221

Unknown

ATPPOX (A THALIANA PYRIDOXIN (PYRODOXAMINE) 5-PHOSPHATE OXIDASE) PYRIDOXAMINE-PHOSPHATE OXIDASE
AT5G54960

Predicted

Affinity Capture-MS

FSW = 0.0108

Unknown

PDC2 (PYRUVATE DECARBOXYLASE-2) CARBOXY-LYASE/ CATALYTIC/ MAGNESIUM ION BINDING / PYRUVATE DECARBOXYLASE/ THIAMIN PYROPHOSPHATE BINDING
AT5G66360

Predicted

Affinity Capture-MS

FSW = 0.0240

Unknown

RIBOSOMAL RNA ADENINE DIMETHYLASE FAMILY PROTEIN

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454