Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT2G34500 - ( CYP710A1 (cytochrome P450 family 710 subfamily A polypeptide 1) C-22 sterol desaturase/ oxygen binding )

25 Proteins interacs with AT2G34500
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT5G66680

Predicted

Phenotypic Enhancement

FSW = 0.0571

Unknown

DGL1 DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE-PROTEIN GLYCOTRANSFERASE
AT1G59820

Predicted

Phenotypic Suppression

FSW = 0.0914

Unknown

ALA3 (AMINOPHOSPHOLIPID ATPASE3) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM / PHOSPHOLIPID TRANSPORTER
AT1G07670

Predicted

Phenotypic Suppression

FSW = 0.0882

Unknown

CALCIUM-TRANSPORTING ATPASE
AT5G52640

Predicted

synthetic growth defect

FSW = 0.0209

Unknown

ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT5G19330

Predicted

Phenotypic Suppression

FSW = 0.1195

Unknown

ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN / BTB/POZ DOMAIN-CONTAINING PROTEIN
AT2G35670

Predicted

Phenotypic Enhancement

FSW = 0.0496

Unknown

FIS2 (FERTILIZATION INDEPENDENT SEED 2) TRANSCRIPTION FACTOR
AT2G47620

Predicted

Phenotypic Suppression

FSW = 0.0316

Unknown

ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING
AT5G18280

Predicted

Phenotypic Enhancement

FSW = 0.3042

Unknown

ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) ATPASE/ NUCLEOTIDE DIPHOSPHATASE
AT1G26450

Predicted

Phenotypic Enhancement

FSW = 0.1895

Unknown

BETA-13-GLUCANASE-RELATED
AT1G57600

Predicted

Phenotypic Enhancement

FSW = 0.2048

Unknown

MEMBRANE BOUND O-ACYL TRANSFERASE (MBOAT) FAMILY PROTEIN
AT1G57620

Predicted

Phenotypic Enhancement

FSW = 0.0776

Unknown

EMP24/GP25L/P24 FAMILY PROTEIN
AT1G60620

Predicted

Phenotypic Suppression

FSW = 0.0131

Unknown

ATRPAC43 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT3G01090

Predicted

biochemical

FSW = 0.0269

Unknown

AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10) PROTEIN BINDING / PROTEIN KINASE
AT3G22480

Predicted

Phenotypic Suppression

FSW = 0.0833

Unknown

PREFOLDIN-RELATED KE2 FAMILY PROTEIN
AT5G27970Predicted

Phenotypic Enhancement

Phenotypic Enhancement

FSW = 0.1581

Unknown

BINDING
AT5G61150

Predicted

Phenotypic Enhancement

FSW = 0.0495

Unknown

VIP4 (VERNALIZATION INDEPENDENCE 4) PROTEIN BINDING
AT2G34770

Predicted

Phenotypic Suppression

FSW = 0.1157

Unknown

FAH1 (FATTY ACID HYDROXYLASE 1) CATALYTIC/ FATTY ACID ALPHA-HYDROXYLASE
AT3G54380

Predicted

Phenotypic Suppression

FSW = 0.0218

Unknown

SAC3/GANP FAMILY PROTEIN
AT5G10260

Predicted

Phenotypic Enhancement

FSW = 0.0603

Unknown

ATRABH1E (ARABIDOPSIS RAB GTPASE HOMOLOG H1E) GTP BINDING
AT5G42000

Predicted

Phenotypic Suppression

FSW = 0.1406

Unknown

ORMDL FAMILY PROTEIN
AT2G27690

Predicted

Gene fusion method

Co-expression

FSW = 0.0627

Unknown

CYP94C1 FATTY ACID (OMEGA-1)-HYDROXYLASE/ OXYGEN BINDING
AT4G37320

Predicted

Gene fusion method

Co-expression

FSW = 0.2069

Unknown

CYP81D5 ELECTRON CARRIER/ HEME BINDING / IRON ION BINDING / MONOOXYGENASE/ OXYGEN BINDING
AT2G34490

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.1254

Unknown

CYP710A2 (CYTOCHROME P450 FAMILY 710 SUBFAMILY A POLYPEPTIDE 2) C-22 STEROL DESATURASE/ OXYGEN BINDING
AT2G28860

Predicted

Phylogenetic profile method

FSW = 0.1048

Unknown

CYP710A4 (CYTOCHROME P450 FAMILY 710 SUBFAMILY A POLYPEPTIDE 4) ELECTRON CARRIER/ HEME BINDING / IRON ION BINDING / MONOOXYGENASE/ OXYGEN BINDING
AT2G28850

Predicted

Phylogenetic profile method

FSW = 0.3560

Unknown

CYP710A3 (CYTOCHROME P450 FAMILY 710 SUBFAMILY A POLYPEPTIDE 3) ELECTRON CARRIER/ HEME BINDING / IRON ION BINDING / MONOOXYGENASE/ OXYGEN BINDING

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Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454