Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT3G04080 - ( ATAPY1 (APYRASE 1) ATPase/ calmodulin binding / nucleotide diphosphatase )

26 Proteins interacs with AT3G04080
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G27170

Predicted

interologs mapping

FSW = 0.1735

Unknown

CLC-B (CHLORIDE CHANNEL B) ANION CHANNEL/ VOLTAGE-GATED CHLORIDE CHANNEL
AT5G66680

Predicted

interologs mapping

FSW = 0.1179

Unknown

DGL1 DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE-PROTEIN GLYCOTRANSFERASE
AT4G19640

Predicted

interologs mapping

FSW = 0.0978

Unknown

ARA7 GTP BINDING
AT1G31780

Predicted

interologs mapping

FSW = 0.1555

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CONSERVED OLIGOMERIC COMPLEX COG6 (INTERPROIPR010490) HAS 281 BLAST HITS TO 279 PROTEINS IN 131 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 132 FUNGI - 106 PLANTS - 21 VIRUSES - 0 OTHER EUKARYOTES - 20 (SOURCE NCBI BLINK)
AT2G45200

Predicted

interologs mapping

FSW = 0.2078

Unknown

GOS12 (GOLGI SNARE 12) SNARE BINDING
AT2G30710

Predicted

interologs mapping

FSW = 0.3091

Unknown

RABGAP/TBC DOMAIN-CONTAINING PROTEIN
AT3G62870

Predicted

synthetic growth defect

FSW = 0.0059

Unknown

60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT1G07420

Predicted

interologs mapping

FSW = 0.1108

Unknown

SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1) 4-ALPHA-METHYL-DELTA7-STEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE
AT1G06470

Predicted

interologs mapping

FSW = 0.2232

Unknown

PHOSPHATE TRANSLOCATOR-RELATED
AT1G13210

Predicted

interologs mapping

FSW = 0.1897

Unknown

ACAL (AUTOINHIBITED CA2+/ATPASE II) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM / CALMODULIN BINDING
AT2G26660

Predicted

interologs mapping

FSW = 0.0706

Unknown

SPX2 (SPX DOMAIN GENE 2)
AT5G18280

Predicted

Shared biological function

Co-expression

FSW = 0.4961

Unknown

ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) ATPASE/ NUCLEOTIDE DIPHOSPHATASE
AT1G71270

Predicted

interologs mapping

FSW = 0.1304

Unknown

POK (POKY POLLEN TUBE)
AT3G05710

Predicted

interologs mapping

FSW = 0.1857

Unknown

SYP43 (SYNTAXIN OF PLANTS 43) SNAP RECEPTOR
AT2G44660

Predicted

interologs mapping

FSW = 0.1875

Unknown

TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TRANSFERASE TRANSFERRING HEXOSYL GROUPS
AT1G13950

Predicted

synthetic growth defect

FSW = 0.0097

Unknown

ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1) TRANSLATION INITIATION FACTOR
AT1G14230

Predicted

interologs mapping

interologs mapping

Phenotypic Enhancement

FSW = 0.1290

Unknown

NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN / GDA1/CD39 FAMILY PROTEIN
AT5G52210

Predicted

interologs mapping

Synthetic Lethality

FSW = 0.1368

Unknown

ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1) GTP BINDING
AT5G27970Predicted

interologs mapping

FSW = 0.1542

Unknown

BINDING
AT5G13060

Predicted

interologs mapping

FSW = 0.0947

Unknown

ABAP1 (ARMADILLO BTB ARABIDOPSIS PROTEIN 1) PROTEIN BINDING
AT2G34770

Predicted

interologs mapping

FSW = 0.1507

Unknown

FAH1 (FATTY ACID HYDROXYLASE 1) CATALYTIC/ FATTY ACID ALPHA-HYDROXYLASE
AT1G70790

Predicted

interologs mapping

FSW = 0.2567

Unknown

C2 DOMAIN-CONTAINING PROTEIN
AT1G09460

Predicted

interologs mapping

FSW = 0.3262

Unknown

GLUCAN ENDO-13-BETA-GLUCOSIDASE-RELATED
AT1G48760

Predicted

interologs mapping

FSW = 0.3355

Unknown

DELTA-ADR (DELTA-ADAPTIN) BINDING / CLATHRIN BINDING / PROTEIN BINDING / PROTEIN TRANSPORTER
AT1G57600

Predicted

interologs mapping

FSW = 0.3600

Unknown

MEMBRANE BOUND O-ACYL TRANSFERASE (MBOAT) FAMILY PROTEIN
AT2G28850

Predicted

interologs mapping

FSW = 0.3462

Unknown

CYP710A3 (CYTOCHROME P450 FAMILY 710 SUBFAMILY A POLYPEPTIDE 3) ELECTRON CARRIER/ HEME BINDING / IRON ION BINDING / MONOOXYGENASE/ OXYGEN BINDING

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454