Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT3G05160 - ( sugar transporter putative )

24 Proteins interacs with AT3G05160
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT2G48020

Predicted

Phylogenetic profile method

FSW = 0.8772

Unknown

SUGAR TRANSPORTER PUTATIVE
AT1G11260

Predicted

Phylogenetic profile method

FSW = 0.4577

Unknown

STP1 (SUGAR TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G03090

Predicted

Gene neighbors method

Phylogenetic profile method

FSW = 0.8817

Unknown

ATVGT1 (ARABIDOPSIS THALIANA VACUOLAR GLUCOSE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ FRUCTOSE TRANSMEMBRANE TRANSPORTER/ GLUCOSE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G75220

Predicted

Phylogenetic profile method

FSW = 0.9404

Unknown

INTEGRAL MEMBRANE PROTEIN PUTATIVE
AT1G08920

Predicted

Phylogenetic profile method

FSW = 0.6938

Unknown

SUGAR TRANSPORTER PUTATIVE
AT1G19450

Predicted

Phylogenetic profile method

FSW = 0.9404

Unknown

INTEGRAL MEMBRANE PROTEIN PUTATIVE / SUGAR TRANSPORTER FAMILY PROTEIN
AT5G59250

Predicted

Phylogenetic profile method

FSW = 0.7872

Unknown

SUGAR TRANSPORTER FAMILY PROTEIN
AT3G18830

Predicted

Gene neighbors method

Phylogenetic profile method

FSW = 0.8015

Unknown

ATPLT5 (POLYOL TRANSPORTER 5) D-RIBOSE TRANSMEMBRANE TRANSPORTER/ D-XYLOSE TRANSMEMBRANE TRANSPORTER/ CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ GALACTOSE TRANSMEMBRANE TRANSPORTER/ GLUCOSE TRANSMEMBRANE TRANSPORTER/ GLYCEROL TRANSMEMBRANE TRANSPORTER/ MANN
AT5G23270

Predicted

Phylogenetic profile method

FSW = 0.7519

Unknown

STP11 (SUGAR TRANSPORTER 11) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G05150

Predicted

Gene neighbors method

Phylogenetic profile method

FSW = 0.9615

Unknown

SUGAR TRANSPORTER FAMILY PROTEIN
AT3G20460

Predicted

Gene neighbors method

Phylogenetic profile method

FSW = 0.7346

Unknown

SUGAR TRANSPORTER PUTATIVE
AT3G05165

Predicted

Gene neighbors method

Phylogenetic profile method

FSW = 0.9615

Unknown

SUGAR TRANSPORTER PUTATIVE
AT1G05030

Predicted

Phylogenetic profile method

FSW = 0.7772

Unknown

HEXOSE TRANSPORTER PUTATIVE
AT2G20780

Predicted

Phylogenetic profile method

FSW = 0.8522

Unknown

MANNITOL TRANSPORTER PUTATIVE
AT3G05400

Predicted

Phylogenetic profile method

FSW = 0.7901

Unknown

SUGAR TRANSPORTER PUTATIVE
AT1G54730

Predicted

Phylogenetic profile method

FSW = 0.9259

Unknown

SUGAR TRANSPORTER PUTATIVE
AT5G27360

Predicted

Phylogenetic profile method

FSW = 0.6932

Unknown

SFP2 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT5G18840

Predicted

Phylogenetic profile method

FSW = 0.9091

Unknown

SUGAR TRANSPORTER PUTATIVE
AT4G04750

Predicted

Phylogenetic profile method

FSW = 0.9259

Unknown

CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT2G18480

Predicted

Phylogenetic profile method

FSW = 0.8238

Unknown

MANNITOL TRANSPORTER PUTATIVE
AT3G19940

Predicted

Phylogenetic profile method

FSW = 0.2861

Unknown

SUGAR TRANSPORTER PUTATIVE
AT4G36670

Predicted

Phylogenetic profile method

FSW = 0.8478

Unknown

MANNITOL TRANSPORTER PUTATIVE
AT1G08930

Predicted

Phylogenetic profile method

FSW = 0.9434

Unknown

ERD6 (EARLY RESPONSE TO DEHYDRATION 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGAR TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G79820

Predicted

Phylogenetic profile method

FSW = 0.6500

Unknown

SGB1 (SUPPRESSOR OF G PROTEIN BETA1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER

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Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454