Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT3G22830 - ( AT-HSFA6B DNA binding / transcription factor )

13 Proteins interacs with AT3G22830
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G48750

Predicted

Synthetic Lethality

FSW = 0.0231

Class C:

nucleus

CDC2 (CELL DIVISION CONTROL 2) CYCLIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING / PROTEIN KINASE
AT3G12580

Predicted

Synthetic Rescue

Synthetic Rescue

Phenotypic Suppression

FSW = 0.0662

Unknown

HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING
AT5G56030

Predicted

interologs mapping

interologs mapping

Phenotypic Suppression

FSW = 0.0619

Unknown

HSP81-2 (HEAT SHOCK PROTEIN 81-2) ATP BINDING
AT5G52640

Predicted

Phenotypic Suppression

FSW = 0.0230

Unknown

ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT1G62740

Predicted

synthetic growth defect

FSW = 0.1846

Unknown

STRESS-INDUCIBLE PROTEIN PUTATIVE
AT1G79930

Predicted

synthetic growth defect

FSW = 0.1286

Unknown

HSP91 ATP BINDING
AT1G07270

Predicted

Affinity Capture-MS

FSW = 0.0547

Unknown

CELL DIVISION CONTROL PROTEIN CDC6B PUTATIVE (CDC6B)
AT1G73570

Predicted

Affinity Capture-MS

FSW = 0.0988

Unknown

SUPPRESSOR OF LIN-12-LIKE PROTEIN-RELATED / SEL-1 PROTEIN-RELATED
AT2G01130

Predicted

Affinity Capture-MS

FSW = 0.1667

Unknown

ATP BINDING / ATP-DEPENDENT HELICASE/ RNA BINDING / DOUBLE-STRANDED RNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT3G01090

Predicted

two hybrid

biochemical

FSW = 0.0439

Unknown

AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10) PROTEIN BINDING / PROTEIN KINASE
AT1G10580

Predicted

Phenotypic Suppression

FSW = 0.0208

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G25230

Predicted

Phenotypic Suppression

FSW = 0.0415

Unknown

ROF1 (ROTAMASE FKBP 1) FK506 BINDING / CALMODULIN BINDING / PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT3G26020

Predicted

interologs mapping

FSW = 0.0975

Unknown

SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B PUTATIVE

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Fasta sequences:

Proteins

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Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454