Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT4G04695 - ( CPK31 ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase )
103 Proteins interacs with AT4G04695Locus | Method | FSW | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT5G09590 | PredictedPhenotypic Enhancement | FSW = 0.1605
| Unknown | MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING |
AT3G09440 | PredictedPhenotypic Suppression | FSW = 0.0360
| Unknown | HEAT SHOCK COGNATE 70 KDA PROTEIN 3 (HSC70-3) (HSP70-3) |
AT3G51850 | PredictedPhylogenetic profile method | FSW = 0.3147
| Unknown | CPK13 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE |
AT3G22110 | PredictedSynthetic Rescue | FSW = 0.0742
| Unknown | PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE |
AT4G33650 | PredictedAffinity Capture-MS | FSW = 0.0588
| Unknown | DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP BINDING / GTPASE/ PHOSPHOINOSITIDE BINDING |
AT1G23310 | PredictedAffinity Capture-MS | FSW = 0.0185
| Unknown | GGT1 (GLUTAMATEGLYOXYLATE AMINOTRANSFERASE) L-ALANINE2-OXOGLUTARATE AMINOTRANSFERASE/ GLYCINE2-OXOGLUTARATE AMINOTRANSFERASE |
AT5G65430 | PredictedPhenotypic Enhancement | FSW = 0.1031
| Unknown | GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING |
AT5G25400 | PredictedAffinity Capture-MS | FSW = 0.1151
| Unknown | PHOSPHATE TRANSLOCATOR-RELATED |
AT1G56050 | PredictedPhenotypic Enhancement | FSW = 0.1801
| Unknown | GTP-BINDING PROTEIN-RELATED |
AT5G35790 | PredictedAffinity Capture-MS | FSW = 0.0102
| Unknown | G6PD1 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1) GLUCOSE-6-PHOSPHATE DEHYDROGENASE |
AT1G10070 | PredictedAffinity Capture-MS | FSW = 0.0573
| Unknown | ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) BRANCHED-CHAIN-AMINO-ACID TRANSAMINASE/ CATALYTIC |
AT4G23430 | PredictedSynthetic Lethality | FSW = 0.0147
| Unknown | SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN |
AT3G54670 | PredictedPhenotypic Enhancement | FSW = 0.0593
| Unknown | TTN8 (TITAN8) ATP BINDING / TRANSPORTER |
AT2G42590 | Predictedinterologs mapping | FSW = 0.0210
| Unknown | GRF9 (GENERAL REGULATORY FACTOR 9) CALCIUM ION BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING |
AT4G23650 | PredictedPhylogenetic profile method | FSW = 0.2688
| Unknown | CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT1G35670 | PredictedShared biological functionPhylogenetic profile method | FSW = 0.2016
| Unknown | ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2) CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE |
AT1G73230 | PredictedAffinity Capture-MS | FSW = 0.0331
| Unknown | NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX (NAC) DOMAIN-CONTAINING PROTEIN |
AT1G74740 | PredictedPhylogenetic profile method | FSW = 0.2581
| Unknown | CPK30 (CALCIUM-DEPENDENT PROTEIN KINASE 30) CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE |
AT3G45780 | PredictedAffinity Capture-MStwo hybridAffinity Capture-MSCo-purificationCo-purification | FSW = 0.0903
| Unknown | PHOT1 (PHOTOTROPIN 1) FMN BINDING / BLUE LIGHT PHOTORECEPTOR/ KINASE/ PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE |
AT3G02740 | PredictedPhenotypic Enhancement | FSW = 0.0316
| Unknown | ASPARTYL PROTEASE FAMILY PROTEIN |
AT4G04340 | Predictedtwo hybridPhenotypic Enhancement | FSW = 0.0381
| Unknown | EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED |
AT1G61950 | PredictedPhylogenetic profile method | FSW = 0.2933
| Unknown | CPK19 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT4G04720 | PredictedPhylogenetic profile method | FSW = 0.1970
| Unknown | CPK21 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT5G66210 | PredictedPhylogenetic profile method | FSW = 0.3136
| Unknown | CPK28 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT1G04750 | Predictedsynthetic growth defect | FSW = 0.1129
| Unknown | VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721) |
AT2G32670 | PredictedPhenotypic Enhancement | FSW = 0.1303
| Unknown | ATVAMP725 |
AT2G17890 | PredictedPhylogenetic profile method | FSW = 0.3147
| Unknown | CPK16 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT1G13320 | PredictedAffinity Capture-MS | FSW = 0.0319
| Unknown | PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3) BINDING / PROTEIN PHOSPHATASE TYPE 2A REGULATOR |
AT5G58800 | PredictedAffinity Capture-MS | FSW = 0.0093
| Unknown | QUINONE REDUCTASE FAMILY PROTEIN |
AT3G57530 | PredictedShared biological functionPhylogenetic profile method | FSW = 0.2304
| Unknown | CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32) CALCIUM-DEPENDENT PROTEIN KINASE C/ CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING |
AT5G12480 | PredictedPhylogenetic profile method | FSW = 0.1388
| Unknown | CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE |
AT5G19450 | PredictedPhylogenetic profile method | FSW = 0.2225
| Unknown | CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT1G32090 | PredictedSynthetic RescueReconstituted ComplexCo-purificationCo-purificationCo-purificationCo-purificationCo-purificationCo-purification | FSW = 0.1863
| Unknown | EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED |
AT4G29360 | PredictedAffinity Capture-MSCo-purification | FSW = 0.0893
| Unknown | GLYCOSYL HYDROLASE FAMILY 17 PROTEIN |
AT4G21680 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSPhenotypic Enhancement | FSW = 0.0561
| Unknown | PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN |
AT3G11730 | PredictedAffinity Capture-MS | FSW = 0.0111
| Unknown | ATFP8 GTP BINDING / GTP-DEPENDENT PROTEIN BINDING / MYOSIN XI TAIL BINDING |
AT4G14350 | PredictedPhenotypic Enhancement | FSW = 0.0242
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT2G37790 | PredictedPhenotypic Enhancement | FSW = 0.1715
| Unknown | ALDO/KETO REDUCTASE FAMILY PROTEIN |
AT5G48880 | PredictedCo-purificationSynthetic LethalityAffinity Capture-MSCo-purification | FSW = 0.0900
| Unknown | PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2) ACETYL-COA C-ACYLTRANSFERASE/ CATALYTIC |
AT4G09570 | PredictedPhylogenetic profile method | FSW = 0.1586
| Unknown | CPK4 CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE |
AT5G41370 | PredictedSynthetic Rescue | FSW = 0.0199
| Unknown | XPB1 (ARABIDOPSIS HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1) ATP BINDING / ATP-DEPENDENT DNA HELICASE/ ATP-DEPENDENT HELICASE/ DNA BINDING / HELICASE/ HYDROLASE/ NUCLEIC ACID BINDING |
AT4G34430 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0773
| Unknown | CHB3 DNA BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING |
AT1G79020 | PredictedAffinity Capture-MS | FSW = 0.0182
| Unknown | TRANSCRIPTION FACTOR-RELATED |
AT3G13445 | PredictedPhenotypic Enhancement | FSW = 0.0644
| Unknown | TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING |
AT4G09800 | PredictedPhenotypic Enhancement | FSW = 0.0375
| Unknown | RPS18C (S18 RIBOSOMAL PROTEIN) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME |
AT5G54840 | PredictedSynthetic Rescue | FSW = 0.0199
| Unknown | SGP1 GTP BINDING |
AT2G38880 | PredictedAffinity Capture-MS | FSW = 0.0209
| Unknown | NF-YB1 (NUCLEAR FACTOR Y SUBUNIT B1) TRANSCRIPTION FACTOR |
AT2G30160 | PredictedPhenotypic Enhancement | FSW = 0.2034
| Unknown | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN |
AT2G19980 | PredictedPhenotypic Enhancement | FSW = 0.1377
| Unknown | ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN |
AT3G07140 | PredictedPhenotypic Enhancement | FSW = 0.1344
| Unknown | GPI TRANSAMIDASE COMPONENT GPI16 SUBUNIT FAMILY PROTEIN |
AT5G47720 | PredictedCo-purificationCo-purification | FSW = 0.0945
| Unknown | ACETYL-COA C-ACYLTRANSFERASE PUTATIVE / 3-KETOACYL-COA THIOLASE PUTATIVE |
AT3G23580 | PredictedAffinity Capture-MS | FSW = 0.0296
| Unknown | RNR2A (RIBONUCLEOTIDE REDUCTASE 2A) RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE |
AT1G17810 | PredictedAffinity Capture-MS | FSW = 0.0741
| Unknown | BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN) WATER CHANNEL |
AT4G39200 | PredictedPhenotypic Enhancement | FSW = 0.2026
| Unknown | 40S RIBOSOMAL PROTEIN S25 (RPS25E) |
AT4G16420 | PredictedPhenotypic Enhancement | FSW = 0.0850
| Unknown | ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR |
AT4G17190 | PredictedAffinity Capture-MSPhenotypic Suppression | FSW = 0.1055
| Unknown | FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE |
AT1G20693 | PredictedPhenotypic Enhancement | FSW = 0.1415
| Unknown | HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR |
AT1G25260 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0593
| Unknown | ACIDIC RIBOSOMAL PROTEIN P0-RELATED |
AT1G31170 | PredictedAffinity Capture-MSPhenotypic Enhancement | FSW = 0.1302
| Unknown | SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS |
AT1G66740 | PredictedCo-purificationCo-purificationCo-purificationCo-purificationCo-purificationCo-purificationCo-purificationAffinity Capture-MS | FSW = 0.0720
| Unknown | SGA2 |
AT1G78770 | PredictedPhenotypic Enhancement | FSW = 0.1222
| Unknown | CELL DIVISION CYCLE FAMILY PROTEIN |
AT1G79210 | PredictedAffinity Capture-MS | FSW = 0.0150
| Unknown | 20S PROTEASOME ALPHA SUBUNIT B PUTATIVE |
AT2G16230 | PredictedAffinity Capture-MSAffinity Capture-Western | FSW = 0.1210
| Unknown | CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS |
AT3G02000 | PredictedPhenotypic Enhancement | FSW = 0.1384
| Unknown | ROXY1 DISULFIDE OXIDOREDUCTASE |
AT3G11230 | PredictedPhenotypic Enhancement | FSW = 0.1778
| Unknown | YIPPEE FAMILY PROTEIN |
AT3G18660 | PredictedAffinity Capture-MS | FSW = 0.0872
| Unknown | PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS |
AT3G25260 | PredictedCo-purificationCo-purificationCo-purificationCo-purificationReconstituted ComplexCo-purificationSynthetic Lethality | FSW = 0.0818
| Unknown | PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN |
AT3G27440 | PredictedPhenotypic Enhancement | FSW = 0.1053
| Unknown | URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE |
AT3G60240 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0083
| Unknown | EIF4G (EUKARYOTIC TRANSLATION INITIATION FACTOR 4G) TRANSLATION INITIATION FACTOR |
AT1G10210 | PredictedPhenotypic Suppression | FSW = 0.0494
| Unknown | ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE |
AT1G13580 | PredictedPhenotypic Enhancement | FSW = 0.1496
| Unknown | LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) |
AT1G60680 | PredictedPhenotypic Enhancement | FSW = 0.1058
| Unknown | ALDO/KETO REDUCTASE FAMILY PROTEIN |
AT2G03130 | PredictedPhenotypic Enhancement | FSW = 0.2007
| Unknown | RIBOSOMAL PROTEIN L12 FAMILY PROTEIN |
AT2G16740 | PredictedSynthetic Lethality | FSW = 0.0099
| Unknown | UBC29 (UBIQUITIN-CONJUGATING ENZYME 29) UBIQUITIN-PROTEIN LIGASE |
AT2G24960 | PredictedPhenotypic Enhancement | FSW = 0.1229
| Unknown | UNKNOWN PROTEIN |
AT3G13210 | PredictedPhenotypic Enhancement | FSW = 0.0561
| Unknown | CROOKED NECK PROTEIN PUTATIVE / CELL CYCLE PROTEIN PUTATIVE |
AT3G25900 | PredictedPhenotypic Enhancement | FSW = 0.1062
| Unknown | HMT-1 HOMOCYSTEINE S-METHYLTRANSFERASE |
AT3G49420 | PredictedAffinity Capture-Western | FSW = 0.0989
| Unknown | GOT1-LIKE FAMILY PROTEIN |
AT4G00980 | PredictedPhenotypic Enhancement | FSW = 0.0431
| Unknown | ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN |
AT4G24160 | PredictedPhenotypic Suppression | FSW = 0.0346
| Unknown | HYDROLASE ALPHA/BETA FOLD FAMILY PROTEIN |
AT4G27130 | PredictedPhenotypic Enhancement | FSW = 0.1325
| Unknown | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE |
AT5G01430 | PredictedPhenotypic Enhancement | FSW = 0.0985
| Unknown | GOT1-LIKE FAMILY PROTEIN |
AT5G14060 | PredictedPhenotypic Enhancement | FSW = 0.1888
| Unknown | CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE |
AT5G17860 | PredictedPhenotypic Enhancement | FSW = 0.0584
| Unknown | CAX7 (CALCIUM EXCHANGER 7) CALCIUMSODIUM ANTIPORTER/ CATIONCATION ANTIPORTER |
AT5G24840 | PredictedSynthetic Lethality | FSW = 0.0582
| Unknown | TRNA (GUANINE-N7-)-METHYLTRANSFERASE |
AT5G42720 | PredictedPhenotypic Enhancement | FSW = 0.0585
| Unknown | GLYCOSYL HYDROLASE FAMILY 17 PROTEIN |
AT5G44830 | PredictedPhenotypic Enhancement | FSW = 0.1588
| Unknown | GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN |
AT5G58180 | PredictedCo-purification | FSW = 0.1300
| Unknown | ATYKT62 |
AT4G04950 | PredictedAffinity Capture-MS | FSW = 0.0204
| Unknown | THIOREDOXIN FAMILY PROTEIN |
AT4G21490 | PredictedSynthetic Lethality | FSW = 0.1525
| Unknown | NDB3 NADH DEHYDROGENASE |
AT4G26510 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.0879
| Unknown | ATP BINDING / KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / URACIL PHOSPHORIBOSYLTRANSFERASE |
AT5G01390 | PredictedAffinity Capture-MS | FSW = 0.0401
| Unknown | DNAJ HEAT SHOCK PROTEIN PUTATIVE |
AT5G01640 | PredictedAffinity Capture-MS | FSW = 0.0610
| Unknown | PRA1B5 (PRENYLATED RAB ACCEPTOR 1B5) |
AT5G37830 | PredictedAffinity Capture-MS | FSW = 0.0585
| Unknown | OXP1 (OXOPROLINASE 1) 5-OXOPROLINASE (ATP-HYDROLYZING)/ HYDROLASE |
AT5G59040 | PredictedAffinity Capture-MS | FSW = 0.0168
| Unknown | COPT3 COPPER ION TRANSMEMBRANE TRANSPORTER/ HIGH AFFINITY COPPER ION TRANSMEMBRANE TRANSPORTER |
AT5G64760 | PredictedPhenotypic Enhancement | FSW = 0.1705
| Unknown | RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B) |
AT5G12180 | PredictedPhylogenetic profile method | FSW = 0.3226
| Unknown | CPK17 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT5G23580 | PredictedPhylogenetic profile method | FSW = 0.3001
| Unknown | CDPK9 (CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT4G04700 | PredictedPhylogenetic profile method | FSW = 0.1977
| Unknown | CPK27 ATP BINDING / CALCIUM ION BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE |
AT5G19360 | PredictedPhylogenetic profile method | FSW = 0.2364
| Unknown | CPK34 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT2G41860 | PredictedPhylogenetic profile method | FSW = 0.2663
| Unknown | CPK14 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT4G36070 | PredictedPhylogenetic profile method | FSW = 0.2968
| Unknown | CPK18 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT1G50700 | PredictedPhylogenetic profile method | FSW = 0.3001
| Unknown | CPK33 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454