Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT4G13020 - ( MHK ATP binding / kinase/ protein kinase/ protein serine/threonine kinase )

59 Proteins interacs with AT4G13020
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G43810

Experimental

protein array

FSW = 0.0131

Unknown

CAM7 (CALMODULIN 7) CALCIUM ION BINDING
AT1G66410

Experimental

protein array

FSW = 0.0146

Unknown

CAM4 (CALMODULIN 4) CALCIUM ION BINDING / SIGNAL TRANSDUCER
AT4G23050

Experimental

protein array

FSW = 0.0476

Unknown

PROTEIN KINASE PUTATIVE
AT3G51920

Experimental

protein array

FSW = 0.0199

Unknown

CAM9 (CALMODULIN 9) CALCIUM ION BINDING
AT2G41090

Experimental

protein array

FSW = 0.0026

Unknown

CALMODULIN-LIKE CALCIUM-BINDING PROTEIN 22 KDA (CABP-22)
AT4G14640

Experimental

protein array

FSW = 0.0179

Unknown

CAM8 (CALMODULIN 8) CALCIUM ION BINDING
AT5G21274

Experimental

protein array

FSW = 0.0138

Unknown

CAM6 (CALMODULIN 6) CALCIUM ION BINDING
AT5G09590

Predicted

Phenotypic Enhancement

FSW = 0.1325

Unknown

MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT3G62870

Predicted

synthetic growth defect

FSW = 0.0287

Unknown

60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT5G10350

Predicted

Affinity Capture-MS

Affinity Capture-MS

Protein-peptide

FSW = 0.0550

Unknown

POLYADENYLATE-BINDING PROTEIN FAMILY PROTEIN / PABP FAMILY PROTEIN
AT3G22110

Predicted

Phenotypic Enhancement

FSW = 0.0670

Unknown

PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT3G22890

Predicted

Synthetic Lethality

synthetic growth defect

FSW = 0.1674

Unknown

APS1 (ATP SULFURYLASE 1) SULFATE ADENYLYLTRANSFERASE (ATP)
AT5G51820

Predicted

Synthetic Lethality

FSW = 0.1873

Unknown

PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE
AT1G48860

Predicted

Phenotypic Suppression

FSW = 0.1667

Unknown

3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE PUTATIVE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PUTATIVE / EPSP SYNTHASE PUTATIVE
AT3G54670

Predicted

Phenotypic Enhancement

FSW = 0.0355

Unknown

TTN8 (TITAN8) ATP BINDING / TRANSPORTER
AT1G45145

Predicted

Phenotypic Enhancement

FSW = 0.1020

Unknown

ATTRX5 OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR
AT5G60540

Predicted

Phenotypic Enhancement

FSW = 0.2161

Unknown

PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT1G04750

Predicted

Phenotypic Enhancement

FSW = 0.0930

Unknown

VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)
AT2G37790

Predicted

Phenotypic Enhancement

FSW = 0.1567

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT3G13445

Predicted

Phenotypic Suppression

FSW = 0.0792

Unknown

TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT4G25340

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1567

Unknown

IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT2G47510

Predicted

Affinity Capture-MS

FSW = 0.0092

Unknown

FUM1 (FUMARASE 1) CATALYTIC/ FUMARATE HYDRATASE
AT2G30160

Predicted

Phenotypic Enhancement

FSW = 0.2465

Unknown

MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT5G02730

Predicted

Phenotypic Enhancement

FSW = 0.0696

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT5G24090

Predicted

Synthetic Lethality

FSW = 0.0874

Unknown

ACIDIC ENDOCHITINASE (CHIB1)
AT2G19980

Predicted

Phenotypic Enhancement

FSW = 0.2454

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT4G39200

Predicted

Phenotypic Enhancement

synthetic growth defect

FSW = 0.2134

Unknown

40S RIBOSOMAL PROTEIN S25 (RPS25E)
AT1G20693

Predicted

Phenotypic Enhancement

FSW = 0.2017

Unknown

HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G27320

Predicted

Phenotypic Enhancement

FSW = 0.0380

Unknown

AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) CYTOKININ RECEPTOR/ OSMOSENSOR/ PROTEIN HISTIDINE KINASE
AT1G33040

Predicted

Affinity Capture-MS

FSW = 0.0110

Unknown

NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5)
AT1G64170

Predicted

Phenotypic Enhancement

FSW = 0.0381

Unknown

ATCHX16 (CATION/H+ EXCHANGER 16) MONOVALENT CATIONPROTON ANTIPORTER/ SODIUMHYDROGEN ANTIPORTER
AT2G33560

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0279

Unknown

SPINDLE CHECKPOINT PROTEIN-RELATED
AT2G37420

Predicted

Phenotypic Enhancement

FSW = 0.2465

Unknown

KINESIN MOTOR PROTEIN-RELATED
AT2G47760

Predicted

Phenotypic Enhancement

FSW = 0.0303

Unknown

ALG3 ALPHA-13-MANNOSYLTRANSFERASE/ CATALYTIC
AT3G03180

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0238

Unknown

GOT1-LIKE FAMILY PROTEIN
AT3G53510

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0124

Unknown

ABC TRANSPORTER FAMILY PROTEIN
AT1G23460

Predicted

Phenotypic Enhancement

FSW = 0.2470

Unknown

POLYGALACTURONASE
AT1G29970

Predicted

Phenotypic Enhancement

FSW = 0.0960

Unknown

RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)
AT1G52500

Predicted

Synthetic Lethality

FSW = 0.1961

Unknown

ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G68020

Predicted

Phenotypic Enhancement

FSW = 0.1773

Unknown

ATTPS6 ALPHAALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT1G74810

Predicted

Synthetic Lethality

FSW = 0.0308

Unknown

BOR5 ANION EXCHANGER
AT1G75290

Predicted

Phenotypic Enhancement

FSW = 0.0513

Unknown

OXIDOREDUCTASE ACTING ON NADH OR NADPH
AT1G78770

Predicted

synthetic growth defect

Phenotypic Enhancement

FSW = 0.1449

Unknown

CELL DIVISION CYCLE FAMILY PROTEIN
AT2G03130

Predicted

Phenotypic Enhancement

FSW = 0.1950

Unknown

RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G48100

Predicted

Synthetic Lethality

FSW = 0.1439

Unknown

EXONUCLEASE FAMILY PROTEIN
AT3G06470

Predicted

Phenotypic Enhancement

FSW = 0.0529

Unknown

GNS1/SUR4 MEMBRANE FAMILY PROTEIN
AT3G47610

Predicted

synthetic growth defect

FSW = 0.0542

Unknown

TRANSCRIPTION REGULATOR/ ZINC ION BINDING
AT3G59540Predicted

Synthetic Lethality

FSW = 0.1336

Unknown

60S RIBOSOMAL PROTEIN L38 (RPL38B)
AT4G00810

Predicted

two hybrid

FSW = 0.0240

Unknown

60S ACIDIC RIBOSOMAL PROTEIN P1 (RPP1B)
AT5G14060

Predicted

Phenotypic Enhancement

FSW = 0.2539

Unknown

CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE
AT5G14180

Predicted

Phenotypic Enhancement

FSW = 0.1430

Unknown

MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1) CATALYTIC
AT5G16040

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0401

Unknown

REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN
AT5G60550

Predicted

Synthetic Lethality

FSW = 0.0233

Unknown

GRIK2 (GEMINIVIRUS REP INTERACTING KINASE 2) KINASE
AT5G64760

Predicted

Phenotypic Enhancement

FSW = 0.1724

Unknown

RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)
AT5G01770

Predicted

Phenotypic Suppression

FSW = 0.1538

Unknown

RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING
AT5G15070

Predicted

Affinity Capture-MS

FSW = 0.0251

Unknown

ACID PHOSPHATASE/ OXIDOREDUCTASE/ TRANSITION METAL ION BINDING
AT5G46150

Predicted

Phenotypic Enhancement

FSW = 0.0089

Unknown

LEM3 (LIGAND-EFFECT MODULATOR 3) FAMILY PROTEIN / CDC50 FAMILY PROTEIN
AT4G34110

Predicted

Gene fusion method

FSW = 0.0074

Unknown

PAB2 (POLY(A) BINDING 2) RNA BINDING / TRANSLATION INITIATION FACTOR
AT3G19130

Predicted

Gene fusion method

FSW = 0.0161

Unknown

ATRBP47B (RNA-BINDING PROTEIN 47B) RNA BINDING

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454