Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Find locus: show subcellular location show Ontology

Export PPI as  



AtPIN will be upgraded. Please send your suggestions here

AT4G13980 - ( AT-HSFA5 DNA binding / transcription factor )

113 Proteins interacs with AT4G13980
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G09630

Predicted

biochemical

FSW = 0.0127

Class C:

nucleus

60S RIBOSOMAL PROTEIN L4/L1 (RPL4A)
AT5G66680

Predicted

two hybrid

FSW = 0.0117

Class C:

nucleus

DGL1 DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE-PROTEIN GLYCOTRANSFERASE
AT3G09440

Predicted

biochemical

FSW = 0.0068

Class C:

nucleus

HEAT SHOCK COGNATE 70 KDA PROTEIN 3 (HSC70-3) (HSP70-3)
AT1G16240

Predicted

biochemical

FSW = 0.0350

Class C:

nucleus

SYP51 (SYNTAXIN OF PLANTS 51) SNAP RECEPTOR
AT1G72370

Predicted

biochemical

FSW = 0.0235

Class C:

nucleus

P40 STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G48850

Predicted

biochemical

FSW = 0.0226

Class C:

nucleus

EMB1144 (EMBRYO DEFECTIVE 1144) CHORISMATE SYNTHASE
AT2G42590

Predicted

biochemical

FSW = 0.0102

Class C:

nucleus

GRF9 (GENERAL REGULATORY FACTOR 9) CALCIUM ION BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT2G30260

Predicted

biochemical

FSW = 0.0083

Class C:

nucleus

U2B (U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B) RNA BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT5G57015

Predicted

biochemical

FSW = 0.0031

Class C:

nucleus

CKL12 (CASEIN KINASE I-LIKE 12) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G48130

Predicted

biochemical

FSW = 0.0092

Class C:

nucleus

ATPER1 ANTIOXIDANT/ THIOREDOXIN PEROXIDASE
AT4G29510

Predicted

biochemical

FSW = 0.0143

Class C:

nucleus

PRMT11 (ARGININE METHYLTRANSFERASE 11) PROTEIN-ARGININE N-METHYLTRANSFERASE
AT2G44860

Predicted

biochemical

FSW = 0.0019

Class C:

nucleus

60S RIBOSOMAL PROTEIN L24 PUTATIVE
AT2G24840

Predicted

biochemical

FSW = 0.0171

Class C:

nucleus

AGL61 (AGAMOUS-LIKE 61) DNA BINDING / TRANSCRIPTION FACTOR
AT1G21700

Predicted

biochemical

FSW = 0.0149

Class C:

nucleus

ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C) DNA BINDING
AT2G23930

Predicted

biochemical

FSW = 0.0064

Class C:

nucleus

SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G)
AT2G30050

Predicted

biochemical

FSW = 0.0090

Class C:

nucleus

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G40290

Predicted

biochemical

FSW = 0.0150

Class C:

nucleus

EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 PUTATIVE / EIF-2A PUTATIVE / EIF-2-ALPHA PUTATIVE
AT4G01850

Predicted

biochemical

FSW = 0.0114

Class C:

nucleus

SAM-2 (S-ADENOSYLMETHIONINE SYNTHETASE 2) COPPER ION BINDING / METHIONINE ADENOSYLTRANSFERASE
AT1G20140

Predicted

biochemical

FSW = 0.0047

Class C:

nucleus

ASK4 (ARABIDOPSIS SKP1-LIKE 4) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT1G60850

Predicted

biochemical

FSW = 0.0192

Class C:

nucleus

ATRPAC42 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT5G18620

Predicted

biochemical

FSW = 0.0056

Class C:

nucleus

CHR17 (CHROMATIN REMODELING FACTOR17) ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ HELICASE/ HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING / NUCLEOSOME BINDING
AT1G22840

Predicted

biochemical

FSW = 0.0114

Unknown

CYTC-1 (CYTOCHROME C-1) ELECTRON CARRIER/ HEME BINDING / IRON ION BINDING
AT3G62870

Predicted

synthetic growth defect

FSW = 0.0511

Unknown

60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT3G26590

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Affinity Capture-MS

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.3031

Unknown

MATE EFFLUX FAMILY PROTEIN
AT5G01820

Predicted

two hybrid

FSW = 0.0181

Unknown

ATSR1 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G28390

Predicted

biochemical

FSW = 0.0164

Unknown

AAC3 (ADP/ATP CARRIER 3) ATPADP ANTIPORTER/ BINDING
AT5G13450

Predicted

biochemical

FSW = 0.0131

Unknown

ATP SYNTHASE DELTA CHAIN MITOCHONDRIAL PUTATIVE / H(+)-TRANSPORTING TWO-SECTOR ATPASE DELTA (OSCP) SUBUNIT PUTATIVE
AT1G79720

Predicted

biochemical

FSW = 0.0632

Unknown

ASPARTYL PROTEASE FAMILY PROTEIN
AT1G21640

Predicted

biochemical

FSW = 0.0544

Unknown

NADK2 NAD+ KINASE/ CALMODULIN BINDING
AT4G35630

Predicted

biochemical

FSW = 0.0091

Unknown

PSAT O-PHOSPHO-L-SERINE2-OXOGLUTARATE AMINOTRANSFERASE
AT5G63980

Predicted

Affinity Capture-MS

FSW = 0.0111

Unknown

SAL1 3(2)5-BISPHOSPHATE NUCLEOTIDASE/ INOSITOL OR PHOSPHATIDYLINOSITOL PHOSPHATASE
AT1G18870

Predicted

biochemical

FSW = 0.0106

Unknown

ICS2 (ISOCHORISMATE SYNTHASE 2) ISOCHORISMATE SYNTHASE
AT1G27450

Predicted

biochemical

FSW = 0.0286

Unknown

APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1) ADENINE PHOSPHORIBOSYLTRANSFERASE
AT3G09740

Predicted

biochemical

FSW = 0.0164

Unknown

SYP71 (SYNTAXIN OF PLANTS 71) PROTEIN TRANSPORTER
AT4G36490

Predicted

biochemical

FSW = 0.0184

Unknown

SFH12 (SEC14-LIKE 12) PHOSPHATIDYLINOSITOL TRANSPORTER/ TRANSPORTER
AT5G47510

Predicted

synthetic growth defect

FSW = 0.0300

Unknown

SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT1G74050

Predicted

biochemical

FSW = 0.0365

Unknown

60S RIBOSOMAL PROTEIN L6 (RPL6C)
AT4G35020

Predicted

biochemical

FSW = 0.0069

Unknown

ARAC3 (ARABIDOPSIS RAC-LIKE 3) GTP BINDING / GTPASE
AT1G04750

Predicted

biochemical

FSW = 0.0332

Unknown

VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)
AT2G32670

Predicted

biochemical

FSW = 0.0241

Unknown

ATVAMP725
AT1G79450

Predicted

biochemical

FSW = 0.0151

Unknown

ALIS5 (ALA-INTERACTING SUBUNIT 5)
AT1G64230

Predicted

biochemical

FSW = 0.0092

Unknown

UBIQUITIN-CONJUGATING ENZYME PUTATIVE
AT5G62300

Predicted

biochemical

FSW = 0.0069

Unknown

40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT5G26340

Predicted

biochemical

FSW = 0.0161

Unknown

MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT3G46900

Predicted

biochemical

FSW = 0.0152

Unknown

COPT2 COPPER ION TRANSMEMBRANE TRANSPORTER/ HIGH AFFINITY COPPER ION TRANSMEMBRANE TRANSPORTER
AT4G12590

Predicted

biochemical

FSW = 0.0258

Unknown

UNKNOWN PROTEIN
AT3G04800

Predicted

biochemical

FSW = 0.0153

Unknown

ATTIM23-3 P-P-BOND-HYDROLYSIS-DRIVEN PROTEIN TRANSMEMBRANE TRANSPORTER/ PROTEIN TRANSPORTER
AT1G53530

Predicted

biochemical

FSW = 0.0143

Unknown

SIGNAL PEPTIDASE I FAMILY PROTEIN
AT1G70190

Predicted

biochemical

FSW = 0.0110

Unknown

RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G17270

Predicted

biochemical

FSW = 0.0261

Unknown

MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT4G22220

Predicted

biochemical

FSW = 0.0094

Unknown

ISU1 STRUCTURAL MOLECULE
AT2G35120

Predicted

biochemical

FSW = 0.0115

Unknown

GLYCINE CLEAVAGE SYSTEM H PROTEIN MITOCHONDRIAL PUTATIVE
AT3G13790

Predicted

biochemical

FSW = 0.0342

Unknown

ATBFRUCT1 BETA-FRUCTOFURANOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT3G19690

Predicted

biochemical

FSW = 0.0099

Unknown

PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT2G03120

Predicted

biochemical

FSW = 0.0245

Unknown

ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) ASPARTIC-TYPE ENDOPEPTIDASE
AT5G47720

Predicted

biochemical

FSW = 0.0045

Unknown

ACETYL-COA C-ACYLTRANSFERASE PUTATIVE / 3-KETOACYL-COA THIOLASE PUTATIVE
AT1G50110

Predicted

biochemical

FSW = 0.0164

Unknown

BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE 6 / BRANCHED-CHAIN AMINO ACID TRANSAMINASE 6 (BCAT6)
AT2G22540

Predicted

Reconstituted Complex

FSW = 0.0160

Unknown

SVP (SHORT VEGETATIVE PHASE) TRANSCRIPTION FACTOR/ TRANSLATION REPRESSOR NUCLEIC ACID BINDING
AT4G39100

Predicted

biochemical

FSW = 0.0205

Unknown

SHL1 (SHORT LIFE) TRANSCRIPTION FACTOR/ ZINC-MEDIATED TRANSCRIPTIONAL ACTIVATOR
AT5G48070

Predicted

co-fractionation

Co-fractionation

FSW = 0.0073

Unknown

XTH20 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20) HYDROLASE ACTING ON GLYCOSYL BONDS / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS / XYLOGLUCANXYLOGLUCOSYL TRANSFERASE
AT3G13320

Predicted

biochemical

FSW = 0.0323

Unknown

CAX2 (CATION EXCHANGER 2) CALCIUMCATION ANTIPORTER/ CALCIUMHYDROGEN ANTIPORTER
AT1G11475

Predicted

biochemical

FSW = 0.0151

Unknown

NRPB10 DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT1G11530

Predicted

biochemical

FSW = 0.0069

Unknown

ATCXXS1 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1) PROTEIN DISULFIDE ISOMERASE
AT1G12070

Predicted

Synthetic Rescue

FSW = 0.0494

Unknown

RHO GDP-DISSOCIATION INHIBITOR FAMILY PROTEIN
AT1G15240

Predicted

biochemical

FSW = 0.0123

Unknown

PHOX (PX) DOMAIN-CONTAINING PROTEIN
AT1G15440

Predicted

biochemical

FSW = 0.0174

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G20610

Predicted

biochemical

FSW = 0.0027

Unknown

CYCB23 (CYCLIN B23) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G23480

Predicted

biochemical

FSW = 0.0220

Unknown

ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3) CELLULOSE SYNTHASE/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G34460Predicted

biochemical

FSW = 0.0338

Unknown

CYCB15 (CYCLIN B15) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G67300

Predicted

biochemical

FSW = 0.0636

Unknown

HEXOSE TRANSPORTER PUTATIVE
AT1G72320

Predicted

biochemical

FSW = 0.0097

Unknown

APUM23 (ARABIDOPSIS PUMILIO 23) RNA BINDING / BINDING
AT2G03040

Predicted

two hybrid

FSW = 0.0316

Unknown

TRANSMEMBRANE PROTEIN-RELATED
AT2G03130

Predicted

biochemical

FSW = 0.0129

Unknown

RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G03250

Predicted

biochemical

FSW = 0.0271

Unknown

EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN
AT2G03890

Predicted

biochemical

FSW = 0.0125

Unknown

PHOSPHATIDYLINOSITOL 3- AND 4-KINASE FAMILY PROTEIN
AT2G05790

Predicted

biochemical

FSW = 0.0172

Unknown

GLYCOSYL HYDROLASE FAMILY 17 PROTEIN
AT2G19910

Predicted

biochemical

FSW = 0.0176

Unknown

RNA-DEPENDENT RNA POLYMERASE FAMILY PROTEIN
AT2G21250

Predicted

biochemical

FSW = 0.0107

Unknown

MANNOSE 6-PHOSPHATE REDUCTASE (NADPH-DEPENDENT) PUTATIVE
AT2G28720

Predicted

biochemical

FSW = 0.0070

Unknown

HISTONE H2B PUTATIVE
AT2G32220

Predicted

biochemical

FSW = 0.0088

Unknown

60S RIBOSOMAL PROTEIN L27 (RPL27A)
AT2G32765

Predicted

biochemical

FSW = 0.0160

Unknown

SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5) PROTEIN TAG
AT2G32850

Predicted

biochemical

FSW = 0.0089

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT2G36060

Predicted

biochemical

FSW = 0.0273

Unknown

UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN
AT2G37540

Predicted

biochemical

FSW = 0.0190

Unknown

SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN
AT2G43190

Predicted

biochemical

FSW = 0.0474

Unknown

RIBONUCLEASE P FAMILY PROTEIN
AT2G45080

Predicted

two hybrid

FSW = 0.0123

Unknown

CYCP31 (CYCLIN P31) CYCLIN-DEPENDENT PROTEIN KINASE
AT3G06580

Predicted

biochemical

FSW = 0.0162

Unknown

GALK ATP BINDING / GALACTOKINASE
AT3G14090

Predicted

biochemical

FSW = 0.0187

Unknown

ATEXO70D3 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN D3) PROTEIN BINDING
AT3G18630

Predicted

biochemical

FSW = 0.0444

Unknown

URACIL DNA GLYCOSYLASE FAMILY PROTEIN
AT3G53650

Predicted

Synthetic Rescue

FSW = 0.0437

Unknown

HISTONE H2B PUTATIVE
AT3G57140

Predicted

biochemical

FSW = 0.0847

Unknown

PATATIN-RELATED
AT3G58550

Predicted

biochemical

FSW = 0.0385

Unknown

PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN (LTP) FAMILY PROTEIN
AT3G59790

Predicted

biochemical

FSW = 0.0145

Unknown

ATMPK10 MAP KINASE/ KINASE
AT3G61740

Predicted

biochemical

FSW = 0.0185

Unknown

SDG14 (SET DOMAIN PROTEIN 14) DNA BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G09310

Predicted

biochemical

FSW = 0.0237

Unknown

SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN-CONTAINING PROTEIN
AT1G49520

Predicted

Synthetic Lethality

FSW = 0.0351

Unknown

SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN
AT1G55810

Predicted

interologs mapping

FSW = 0.0342

Unknown

URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE
AT4G23920

Predicted

two hybrid

FSW = 0.0066

Unknown

UGE2 (UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 2) UDP-GLUCOSE 4-EPIMERASE/ PROTEIN DIMERIZATION
AT4G31590

Predicted

biochemical

FSW = 0.0191

Unknown

ATCSLC5 (CELLULOSE-SYNTHASE LIKE C5) CELLULOSE SYNTHASE/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT4G32530

Predicted

biochemical

FSW = 0.0164

Unknown

VACUOLAR ATP SYNTHASE PUTATIVE / V-ATPASE PUTATIVE
AT5G05010

Predicted

biochemical

FSW = 0.0118

Unknown

CLATHRIN ADAPTOR COMPLEXES MEDIUM SUBUNIT-RELATED
AT5G05420

Predicted

biochemical

FSW = 0.0414

Unknown

IMMUNOPHILIN PUTATIVE / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PUTATIVE
AT5G06140

Predicted

biochemical

FSW = 0.0106

Unknown

SNX1 (SORTING NEXIN 1) PHOSPHOINOSITIDE BINDING / PROTEIN BINDING
AT5G11500

Predicted

biochemical

FSW = 0.0155

Unknown

UNKNOWN PROTEIN
AT5G11920

Predicted

biochemical

FSW = 0.0365

Unknown

ATCWINV6 (6-&1-FRUCTAN EXOHYDROLASE) HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS / INULINASE/ LEVANASE
AT5G17000

Predicted

biochemical

FSW = 0.0233

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G24510

Predicted

biochemical

FSW = 0.0261

Unknown

60S ACIDIC RIBOSOMAL PROTEIN P1 PUTATIVE
AT5G41610

Predicted

biochemical

FSW = 0.0162

Unknown

ATCHX18 MONOVALENT CATIONPROTON ANTIPORTER/ SODIUMHYDROGEN ANTIPORTER
AT5G41700

Predicted

biochemical

FSW = 0.0060

Unknown

UBC8 (UBIQUITIN CONJUGATING ENZYME 8) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G41880

Predicted

biochemical

FSW = 0.0104

Unknown

POLA3 DNA PRIMASE
AT5G53120

Predicted

Synthetic Rescue

FSW = 0.0318

Unknown

SPDS3 (SPERMIDINE SYNTHASE 3) SPERMIDINE SYNTHASE/ SPERMINE SYNTHASE
AT5G65690

Predicted

Synthetic Rescue

FSW = 0.0636

Unknown

PCK2 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 2) ATP BINDING / PHOSPHOENOLPYRUVATE CARBOXYKINASE (ATP)/ PHOSPHOENOLPYRUVATE CARBOXYKINASE/ PURINE NUCLEOTIDE BINDING
AT5G67380

Predicted

biochemical

FSW = 0.0164

Unknown

CKA1 (CASEIN KINASE ALPHA 1) KINASE

Downloads

Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454