Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT4G14640 - ( CAM8 (CALMODULIN 8) calcium ion binding )
115 Proteins interacs with AT4G14640Locus | Method | FSW | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT5G02500 | Experimentalprotein array | FSW = 0.0029
| Unknown | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) ATP BINDING |
AT3G17240 | Experimentalprotein array | FSW = 0.0169
| Unknown | MTLPD2 (LIPOAMIDE DEHYDROGENASE 2) ATP BINDING / DIHYDROLIPOYL DEHYDROGENASE |
AT5G49760 | Experimentalprotein array | FSW = 0.0937
| Unknown | LEUCINE-RICH REPEAT FAMILY PROTEIN / PROTEIN KINASE FAMILY PROTEIN |
AT3G56270 | Experimentalprotein array | FSW = 0.0843
| Unknown | UNKNOWN PROTEIN |
AT2G39660 | Experimentalprotein array | FSW = 0.0336
| Unknown | BIK1 (BOTRYTIS-INDUCED KINASE1) KINASE |
AT5G56030 | Experimentalprotein array | FSW = 0.0137
| Unknown | HSP81-2 (HEAT SHOCK PROTEIN 81-2) ATP BINDING |
AT4G23650 | Experimentalprotein array | FSW = 0.0573
| Unknown | CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT5G27070 | Experimentalprotein array | FSW = 0.0724
| Unknown | AGL53 TRANSCRIPTION FACTOR |
AT1G74740 | Experimentalprotein array | FSW = 0.0665
| Unknown | CPK30 (CALCIUM-DEPENDENT PROTEIN KINASE 30) CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE |
AT5G01890 | Experimentalprotein array | FSW = 0.0787
| Unknown | LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE PUTATIVE |
AT5G56890 | Experimentalprotein array | FSW = 0.0689
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT1G54610 | Experimentalprotein array | FSW = 0.0885
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT3G05050 | Experimentalprotein array | FSW = 0.0593
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT4G35600 | Experimentalprotein array | FSW = 0.0621
| Unknown | CONNEXIN 32 ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT2G48010 | Experimentalprotein array | FSW = 0.0937
| Unknown | RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) KINASE/ RECEPTOR SIGNALING PROTEIN SERINE/THREONINE KINASE |
AT1G34300 | Experimentalprotein array | FSW = 0.0271
| Unknown | LECTIN PROTEIN KINASE FAMILY PROTEIN |
AT3G28450 | Experimentalprotein array | FSW = 0.1250
| Unknown | LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE PUTATIVE |
AT1G56145 | Experimentalprotein array | FSW = 0.0937
| Unknown | LEUCINE-RICH REPEAT FAMILY PROTEIN / PROTEIN KINASE FAMILY PROTEIN |
AT3G23310 | Experimentalprotein array | FSW = 0.0454
| Unknown | PROTEIN KINASE PUTATIVE |
AT5G20810 | Experimentalprotein array | FSW = 0.0843
| Unknown | AUXIN-RESPONSIVE PROTEIN PUTATIVE / SMALL AUXIN UP RNA (SAUR_B) |
AT4G18950 | Experimentalprotein array | FSW = 0.0787
| Unknown | ANKYRIN PROTEIN KINASE PUTATIVE |
AT4G02640 | Experimentalprotein array | FSW = 0.0637
| Unknown | BZO2H1 DNA BINDING / PROTEIN HETERODIMERIZATION/ SEQUENCE-SPECIFIC DNA BINDING / TRANSCRIPTION FACTOR |
AT4G14340 | Experimentalprotein array | FSW = 0.0275
| Unknown | CKI1 (CASEIN KINASE I) KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT5G49450 | Experimentalprotein array | FSW = 0.0637
| Unknown | ATBZIP1 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 1) DNA BINDING / PROTEIN HETERODIMERIZATION/ TRANSCRIPTION FACTOR |
AT3G58120 | Experimentalprotein array | FSW = 0.0937
| Unknown | BZIP61 DNA BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR |
AT5G38800 | Experimentalprotein array | FSW = 0.0996
| Unknown | ATBZIP43 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 43) DNA BINDING / TRANSCRIPTION FACTOR |
AT2G24840 | Experimentalprotein array | FSW = 0.0724
| Unknown | AGL61 (AGAMOUS-LIKE 61) DNA BINDING / TRANSCRIPTION FACTOR |
AT2G04890 | Experimentalprotein array | FSW = 0.0908
| Unknown | SCL21 (SCARECROW-LIKE 21) TRANSCRIPTION FACTOR |
AT3G15010 | Experimentalprotein array | FSW = 0.0667
| Unknown | RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN |
AT2G46130 | Experimentalprotein array | FSW = 0.1062
| Unknown | WRKY43 TRANSCRIPTION FACTOR |
AT1G60920 | Experimentalprotein array | FSW = 0.0136
| Unknown | AGL55 (AGAMOUS-LIKE 55) DNA BINDING / TRANSCRIPTION FACTOR |
AT5G48670 | Experimentalprotein array | FSW = 0.0937
| Unknown | AGL80 (AGAMOUS-LIKE 80) DNA BINDING / TRANSCRIPTION FACTOR |
AT1G58110 | Experimentalprotein array | FSW = 0.0908
| Unknown | BZIP FAMILY TRANSCRIPTION FACTOR |
AT4G23810 | Experimentalprotein array | FSW = 0.1032
| Unknown | WRKY53 DNA BINDING / PROTEIN BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR |
AT2G31180 | Experimentalprotein array | FSW = 0.0787
| Unknown | MYB14 (MYB DOMAIN PROTEIN 14) DNA BINDING / TRANSCRIPTION FACTOR |
AT2G23290 | Experimentalprotein array | FSW = 0.0843
| Unknown | ATMYB70 (MYB DOMAIN PROTEIN 70) DNA BINDING / TRANSCRIPTION FACTOR |
AT3G12720 | Experimentalprotein array | FSW = 0.0097
| Unknown | ATMYB67 (MYB DOMAIN PROTEIN 67) DNA BINDING / TRANSCRIPTION FACTOR |
AT5G15830 | Experimentalprotein array | FSW = 0.0908
| Unknown | ATBZIP3 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 3) DNA BINDING / TRANSCRIPTION FACTOR |
AT1G59530 | Experimentalprotein array | FSW = 0.0937
| Unknown | ATBZIP4 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 4) DNA BINDING / TRANSCRIPTION FACTOR |
AT3G19290 | Experimentalprotein array | FSW = 0.0693
| Unknown | ABF4 (ABRE BINDING FACTOR 4) DNA BINDING / PROTEIN BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR |
AT2G03710 | Experimentalprotein array | FSW = 0.0121
| Unknown | SEP4 (SEPALLATA 4) DNA BINDING / TRANSCRIPTION FACTOR |
AT1G77145 | Experimentalprotein array | FSW = 0.1945
| Unknown | UNKNOWN PROTEIN |
AT5G41920 | Experimentalprotein array | FSW = 0.0689
| Unknown | SCARECROW TRANSCRIPTION FACTOR FAMILY PROTEIN |
AT4G36250 | Experimentalprotein array | FSW = 0.0694
| Unknown | ALDH3F1 (ALDEHYDE DEHYDROGENASE 3F1) 3-CHLOROALLYL ALDEHYDE DEHYDROGENASE/ ALDEHYDE DEHYDROGENASE (NAD) |
AT2G28380 | Experimentalprotein array | FSW = 0.0694
| Unknown | DRB2 (DSRNA-BINDING PROTEIN 2) DOUBLE-STRANDED RNA BINDING |
AT5G60910 | Experimentalprotein array | FSW = 0.0296
| Unknown | AGL8 (AGAMOUS-LIKE 8) TRANSCRIPTION FACTOR |
AT5G40540 | Experimentalprotein array | FSW = 0.0339
| Unknown | PROTEIN KINASE PUTATIVE |
AT5G38740 | Experimentalprotein array | FSW = 0.0189
| Unknown | AGL77 (AGAMOUS-LIKE 77) TRANSCRIPTION FACTOR |
AT4G13020 | Experimentalprotein array | FSW = 0.0179
| Unknown | MHK ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT1G51170 | Experimentalprotein array | FSW = 0.0271
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT3G12200 | Experimentalprotein array | FSW = 0.0080
| Unknown | ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE |
AT4G02410 | Experimentalprotein array | FSW = 0.0787
| Unknown | LECTIN PROTEIN KINASE FAMILY PROTEIN |
AT1G60040 | Experimentalprotein array | FSW = 0.0656
| Unknown | AGL49 (AGAMOUS-LIKE 49) TRANSCRIPTION FACTOR |
AT5G39810 | Experimentalprotein array | FSW = 0.0937
| Unknown | AGL98 (AGAMOUS-LIKE 98) TRANSCRIPTION FACTOR |
AT5G49490 | Experimentalprotein array | FSW = 0.0996
| Unknown | AGL83 (AGAMOUS-LIKE 83) DNA BINDING / TRANSCRIPTION FACTOR |
AT5G56580 | Experimentalprotein array | FSW = 0.0036
| Unknown | MKK6 (MAP KINASE KINASE 6) MAP KINASE KINASE/ KINASE |
AT5G11620 | Experimentalprotein array | FSW = 0.0504
| Unknown | SWIM ZINC FINGER FAMILY PROTEIN / MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE (MAPKKK)-RELATED |
AT4G37240 | Experimentalprotein array | FSW = 0.0843
| Unknown | UNKNOWN PROTEIN |
AT4G04570 | Experimentalprotein array | FSW = 0.0656
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT1G68380 | Experimentalprotein array | FSW = 0.0937
| Unknown | UNKNOWN PROTEIN |
AT5G39670 | Experimentalprotein array | FSW = 0.1885
| Unknown | CALCIUM-BINDING EF HAND FAMILY PROTEIN |
AT5G35410 | Experimentalprotein array | FSW = 0.0379
| Unknown | SOS2 (SALT OVERLY SENSITIVE 2) KINASE/ PROTEIN KINASE |
AT1G20930 | Experimentalprotein array | FSW = 0.0455
| Unknown | CDKB22 (CYCLIN-DEPENDENT KINASE B22) CYCLIN-DEPENDENT PROTEIN KINASE/ KINASE |
AT3G59150 | Experimentalprotein array | FSW = 0.0996
| Unknown | F-BOX FAMILY PROTEIN |
AT3G20110 | Experimentalprotein array | FSW = 0.0562
| Unknown | CYP705A20 ELECTRON CARRIER/ HEME BINDING / IRON ION BINDING / MONOOXYGENASE/ OXYGEN BINDING |
AT3G20080 | Experimentalprotein array | FSW = 0.0296
| Unknown | CYP705A15 ELECTRON CARRIER/ HEME BINDING / IRON ION BINDING / MONOOXYGENASE/ OXYGEN BINDING |
AT4G31950 | Experimentalprotein array | FSW = 0.0071
| Unknown | CYP82C3 ELECTRON CARRIER/ HEME BINDING / IRON ION BINDING / MONOOXYGENASE/ OXYGEN BINDING |
AT4G08980 | Experimentalprotein array | FSW = 0.0562
| Unknown | F-BOX FAMILY PROTEIN (FBW2) |
AT4G24390 | Experimentalprotein array | FSW = 0.0738
| Unknown | F-BOX FAMILY PROTEIN (FBX14) |
AT1G11270 | Experimentalprotein array | FSW = 0.0194
| Unknown | F-BOX FAMILY PROTEIN |
AT3G18980 | Experimentalprotein array | FSW = 0.0194
| Unknown | F-BOX FAMILY PROTEIN |
AT1G29340 | Experimentalprotein array | FSW = 0.0339
| Unknown | PUB17 (PLANT U-BOX 17) UBIQUITIN-PROTEIN LIGASE |
AT3G50310 | Experimentalprotein array | FSW = 0.0787
| Unknown | MAPKKK20 ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT1G20950 | Experimentalprotein array | FSW = 0.0303
| Unknown | PYROPHOSPHATE--FRUCTOSE-6-PHOSPHATE 1-PHOSPHOTRANSFERASE-RELATED / PYROPHOSPHATE-DEPENDENT 6-PHOSPHOFRUCTOSE-1-KINASE-RELATED |
AT4G23170 | Experimentalprotein array | FSW = 0.0843
| Unknown | EP1 PROTEIN KINASE |
AT5G10520 | Experimentalprotein array | FSW = 0.0656
| Unknown | RBK1 (ROP BINDING PROTEIN KINASES 1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT1G28390 | Experimentalprotein array | FSW = 0.0738
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT5G56040 | Experimentalprotein array | FSW = 0.0885
| Unknown | LEUCINE-RICH REPEAT PROTEIN KINASE PUTATIVE |
AT4G21470 | Experimentalprotein array | FSW = 0.0339
| Unknown | ATFMN/FHY (RIBOFLAVIN KINASE/FMN HYDROLASE) FMN ADENYLYLTRANSFERASE/ RIBOFLAVIN KINASE |
AT2G30980 | Experimentalprotein array | FSW = 0.0590
| Unknown | ASKDZETA (ARABIDOPSIS SHAGGY-RELATED PROTEIN KINASE DZETA) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT4G39540 | Experimentalprotein array | FSW = 0.1062
| Unknown | SHIKIMATE KINASE FAMILY PROTEIN |
AT4G34380 | Experimentalprotein array | FSW = 0.1032
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT5G66790 | Experimentalprotein array | FSW = 0.1147
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT2G27030 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.3439
| Unknown | CAM5 (CALMODULIN 5) CALCIUM ION BINDING |
AT1G12310 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.3654
| Unknown | CALMODULIN PUTATIVE |
AT1G76650 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4086
| Unknown | CALCIUM-BINDING EF HAND FAMILY PROTEIN |
AT5G37770 | PredictedShared biological functionPhylogenetic profile methodCo-expression | FSW = 0.4430
| Unknown | TCH2 (TOUCH 2) CALCIUM ION BINDING |
AT3G50360 | PredictedPhylogenetic profile method | FSW = 0.3285
| Unknown | ATCEN2 (CENTRIN2) CALCIUM ION BINDING |
AT3G43810 | PredictedShared biological functionPhylogenetic profile methodCo-expression | FSW = 0.5555
| Unknown | CAM7 (CALMODULIN 7) CALCIUM ION BINDING |
AT1G66410 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.5864
| Unknown | CAM4 (CALMODULIN 4) CALCIUM ION BINDING / SIGNAL TRANSDUCER |
AT4G37010 | PredictedPhylogenetic profile method | FSW = 0.3748
| Unknown | CALTRACTIN PUTATIVE / CENTRIN PUTATIVE |
AT4G03290 | PredictedGene neighbors methodPhylogenetic profile methodCo-expression | FSW = 0.4363
| Unknown | CALCIUM-BINDING PROTEIN PUTATIVE |
AT1G62820 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4237
| Unknown | CALMODULIN PUTATIVE |
AT5G37780 | PredictedShared biological functionPhylogenetic profile methodCo-expression | FSW = 0.4299
| Unknown | CAM1 (CALMODULIN 1) CALCIUM ION BINDING |
AT5G49480 | PredictedShared biological functionPhylogenetic profile methodCo-expression | FSW = 0.4299
| Unknown | ATCP1 (CA2+-BINDING PROTEIN 1) CALCIUM ION BINDING |
AT3G03000 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4299
| Unknown | CALMODULIN PUTATIVE |
AT3G07490 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4430
| Unknown | AGD11 (ARF-GAP DOMAIN 11) CALCIUM ION BINDING |
AT1G76640 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4324
| Unknown | CALMODULIN-RELATED PROTEIN PUTATIVE |
AT2G36180 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4363
| Unknown | CALMODULIN-RELATED PROTEIN PUTATIVE |
AT1G05990 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4430
| Unknown | CALCIUM-BINDING PROTEIN PUTATIVE |
AT1G18530 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4299
| Unknown | CALMODULIN PUTATIVE |
AT3G03400 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4430
| Unknown | CALMODULIN-RELATED PROTEIN PUTATIVE |
AT4G12860 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4430
| Unknown | UNE14 (UNFERTILIZED EMBRYO SAC 14) CALCIUM ION BINDING |
AT3G03410 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4430
| Unknown | CALMODULIN-RELATED PROTEIN PUTATIVE |
AT1G32250 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4363
| Unknown | CALMODULIN PUTATIVE |
AT2G41110 | PredictedShared biological functionPhylogenetic profile methodCo-expression | FSW = 0.4299
| Unknown | CAM2 (CALMODULIN 2) CALCIUM ION BINDING / PROTEIN BINDING |
AT3G56800 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4363
| Unknown | CAM3 (CALMODULIN 3) CALCIUM ION BINDING |
AT5G17470 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4299
| Unknown | CALMODULIN-RELATED PROTEIN PUTATIVE |
AT3G22930 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4430
| Unknown | CALMODULIN PUTATIVE |
AT3G51920 | PredictedShared biological functionGene fusion methodPhylogenetic profile methodCo-expression | FSW = 0.7543
| Unknown | CAM9 (CALMODULIN 9) CALCIUM ION BINDING |
AT1G73630 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4363
| Unknown | CALCIUM-BINDING PROTEIN PUTATIVE |
AT3G25600 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4430
| Unknown | CALCIUM ION BINDING |
AT1G66400 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.4299
| Unknown | CALMODULIN-RELATED PROTEIN PUTATIVE |
AT5G21274 | PredictedPhylogenetic profile method | FSW = 0.6842
| Unknown | CAM6 (CALMODULIN 6) CALCIUM ION BINDING |
AT1G21550 | PredictedPhylogenetic profile method | FSW = 0.4237
| Unknown | CALCIUM-BINDING PROTEIN PUTATIVE |
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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454