Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT4G15930 - ( microtubule motor )

71 Proteins interacs with AT4G15930
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G09200

Predicted

two hybrid

FSW = 0.0086

Unknown

 60S ACIDIC RIBOSOMAL PROTEIN P0 (RPP0B)
AT2G36160

Predicted

two hybrid

Co-expression

FSW = 0.0104

Unknown

 40S RIBOSOMAL PROTEIN S14 (RPS14A)
AT2G27490

Predicted

interologs mapping

Phenotypic Enhancement

FSW = 0.0197

Unknown

 ATCOAE ATP BINDING / DEPHOSPHO-COA KINASE
AT3G11130

Predicted

two hybrid

FSW = 0.0229

Unknown

 CLATHRIN HEAVY CHAIN PUTATIVE
AT3G11250

Predicted

two hybrid

Co-expression

FSW = 0.0296

Unknown

 60S ACIDIC RIBOSOMAL PROTEIN P0 (RPP0C)
AT3G60840

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.1212

Unknown

 MAP65-4 (MICROTUBULE-ASSOCIATED PROTEIN 65-4)
AT1G64790Predicted

interaction prediction

FSW = 0.0330

Unknown

 BINDING
AT5G55400

Predicted

Phenotypic Enhancement

FSW = 0.0141

Unknown

 FIMBRIN-LIKE PROTEIN PUTATIVE
AT3G08530

Predicted

two hybrid

FSW = 0.0155

Unknown

 CLATHRIN HEAVY CHAIN PUTATIVE
AT4G34670

Predicted

two hybrid

Co-expression

FSW = 0.0156

Unknown

 40S RIBOSOMAL PROTEIN S3A (RPS3AB)
AT3G18190

Predicted

interaction prediction

FSW = 0.0473

Unknown

 CHAPERONIN PUTATIVE
AT4G02230

Predicted

two hybrid

FSW = 0.0136

Unknown

 60S RIBOSOMAL PROTEIN L19 (RPL19C)
AT5G67270

Predicted

interaction prediction

Synthetic Lethality

Synthetic Lethality

Co-expression

FSW = 0.0474

Unknown

 ATEB1C (MICROTUBULE END BINDING PROTEIN 1) MICROTUBULE BINDING
AT3G10180Predicted

two hybrid

FSW = 0.0360

Unknown

 KINESIN MOTOR PROTEIN-RELATED
AT3G46520

Predicted

two hybrid

FSW = 0.0077

Unknown

 ACT12 (ACTIN-12) STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT2G04750

Predicted

Phenotypic Enhancement

FSW = 0.0241

Unknown

 FIMBRIN-LIKE PROTEIN PUTATIVE
AT4G36480

Predicted

interaction prediction

FSW = 0.0229

Unknown

 ATLCB1 (LONG-CHAIN BASE1) PROTEIN BINDING / SERINE C-PALMITOYLTRANSFERASE
AT1G14690

Predicted

Synthetic Lethality

FSW = 0.1290

Unknown

 MAP65-7 (MICROTUBULE-ASSOCIATED PROTEIN 65-7)
AT3G47690

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0519

Unknown

 ATEB1A MICROTUBULE BINDING
AT3G52580

Predicted

two hybrid

FSW = 0.0119

Unknown

 40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT3G14600

Predicted

two hybrid

FSW = 0.0114

Unknown

 60S RIBOSOMAL PROTEIN L18A (RPL18AC)
AT4G26840

Predicted

two hybrid

Co-expression

FSW = 0.0072

Unknown

 SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) PROTEIN BINDING / PROTEIN TAG
AT2G36200

Predicted

interaction prediction

Synthetic Lethality

Synthetic Lethality

FSW = 0.0748

Unknown

 KINESIN MOTOR PROTEIN-RELATED
AT2G25910

Predicted

two hybrid

FSW = 0.0541

Unknown

 3-5 EXONUCLEASE DOMAIN-CONTAINING PROTEIN / K HOMOLOGY DOMAIN-CONTAINING PROTEIN / KH DOMAIN-CONTAINING PROTEIN
AT4G34540

Predicted

two hybrid

FSW = 0.0145

Unknown

 ISOFLAVONE REDUCTASE FAMILY PROTEIN
AT4G23930

Predicted

two hybrid

FSW = 0.0094

Unknown

 FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM EXPRESSED IN 11 PLANT STRUCTURES EXPRESSED DURING 6 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S HARPIN-INDUCED 1 (INTERPROIPR010847) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS PROLINE-RICH FAMILY PROTEIN (TAIRAT1G644501) HAS 80 BLAST HITS TO 75 PROTEINS IN 8 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 0 FUNGI - 0 PLANTS - 80 VIRUSES - 0 OTHER EUKARYOTES - 0 (SOURCE NCBI BLINK)
AT5G47090

Predicted

two hybrid

FSW = 0.0134

Unknown

 UNKNOWN PROTEIN
AT5G48700

Predicted

two hybrid

FSW = 0.0301

Unknown

 UBIQUITIN-RELATED
AT5G67540

Predicted

two hybrid

FSW = 0.0074

Unknown

 GLYCOSYL HYDROLASE FAMILY PROTEIN 43
AT2G18390

Predicted

two hybrid

FSW = 0.0114

Unknown

 TTN5 (TITAN 5) GTP BINDING / GTPASE
AT3G01320Predicted

two hybrid

FSW = 0.0094

Unknown

 SNL1 (SIN3-LIKE 1)
AT2G12550

Predicted

two hybrid

two hybrid

FSW = 0.0103

Unknown

 UBIQUITIN-ASSOCIATED (UBA)/TS-N DOMAIN-CONTAINING PROTEIN
AT2G26200

Predicted

two hybrid

two hybrid

Co-expression

FSW = 0.0285

Unknown

 EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S METHYLTRANSFERASE TYPE 12 (INTERPROIPR013217) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS METHYLTRANSFERASE (TAIRAT1G546501) HAS 1504 BLAST HITS TO 1429 PROTEINS IN 277 SPECIES ARCHAE - 33 BACTERIA - 213 METAZOA - 664 FUNGI - 202 PLANTS - 139 VIRUSES - 0 OTHER EUKARYOTES - 253 (SOURCE NCBI BLINK)
AT2G30330

Predicted

two hybrid

two hybrid

FSW = 0.0180

Unknown

 GCN5L1 FAMILY PROTEIN
AT3G05540

Predicted

two hybrid

FSW = 0.0172

Unknown

 INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CYTOPLASM CONTAINS INTERPRO DOMAIN/S TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN (INTERPROIPR018105) TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR001983) MSS4/TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR011323) TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN CONSERVED SITE (INTERPROIPR018103) MSS4-LIKE (INTERPROIPR011057) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) (TAIRAT3G166401) HAS 640 BLAST HITS TO 640 PROTEINS IN 231 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 343 FUNGI - 110 PLANTS - 105 VIRUSES - 0 OTHER EUKARYOTES - 82 (SOURCE NCBI BLINK)
AT5G01670

Predicted

two hybrid

FSW = 0.0094

Unknown

 ALDOSE REDUCTASE PUTATIVE
AT5G64830

Predicted

two hybrid

FSW = 0.0135

Unknown

 PROGRAMMED CELL DEATH 2 C-TERMINAL DOMAIN-CONTAINING PROTEIN
AT5G66730

Predicted

two hybrid

FSW = 0.0132

Unknown

 ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN
AT5G08535

Predicted

two hybrid

FSW = 0.0139

Unknown

 D111/G-PATCH DOMAIN-CONTAINING PROTEIN
AT5G15020

Predicted

two hybrid

FSW = 0.0290

Unknown

 SNL2 (SIN3-LIKE 2)
AT5G59140

Predicted

two hybrid

two hybrid

FSW = 0.0171

Unknown

 SKP1 FAMILY PROTEIN
AT3G57550

Predicted

two hybrid

in vivo

in vitro

FSW = 0.0109

Unknown

 AGK2 (GUANYLATE KINASE) GUANYLATE KINASE
AT5G38110

Predicted

Affinity Capture-MS

FSW = 0.0156

Unknown

 ASF1B (ANTI- SILENCING FUNCTION 1B)
AT5G42850

Predicted

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.0132

Unknown

 INVOLVED IN CELL REDOX HOMEOSTASIS LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S THIOREDOXIN FOLD (INTERPROIPR012335) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) PROTEIN OF UNKNOWN FUNCTION DUF953 THIOREDOXIN-LIKE (INTERPROIPR010357) HAS 237 BLAST HITS TO 237 PROTEINS IN 83 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 174 FUNGI - 29 PLANTS - 21 VIRUSES - 0 OTHER EUKARYOTES - 13 (SOURCE NCBI BLINK)
AT4G34110

Predicted

Affinity Capture-MS

FSW = 0.0062

Unknown

 PAB2 (POLY(A) BINDING 2) RNA BINDING / TRANSLATION INITIATION FACTOR
AT5G20490

Predicted

in vivo

in vitro

two hybrid

FSW = 0.0144

Unknown

 XIK MOTOR/ PROTEIN BINDING
AT5G20990

Predicted

in vivo

in vitro

two hybrid

FSW = 0.0141

Unknown

 B73 MOLYBDENUM ION BINDING
AT1G08780

Predicted

interaction prediction

Synthetic Lethality

interologs mapping

Phenotypic Enhancement

FSW = 0.0405

Unknown

 AIP3 (ABI3-INTERACTING PROTEIN 3) UNFOLDED PROTEIN BINDING
AT1G29990

Predicted

interaction prediction

Synthetic Lethality

FSW = 0.0408

Unknown

 PDF6 (PREFOLDIN 6) UNFOLDED PROTEIN BINDING
AT1G71790

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0563

Unknown

 F-ACTIN CAPPING PROTEIN BETA SUBUNIT FAMILY PROTEIN
AT2G02370

Predicted

Phenotypic Enhancement

FSW = 0.0270

Unknown

 FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SNARE ASSOCIATED GOLGI PROTEIN (INTERPROIPR015414) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G124501) HAS 1745 BLAST HITS TO 1745 PROTEINS IN 446 SPECIES ARCHAE - 2 BACTERIA - 792 METAZOA - 108 FUNGI - 97 PLANTS - 119 VIRUSES - 0 OTHER EUKARYOTES - 627 (SOURCE NCBI BLINK)
AT2G28390

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0248

Unknown

 SAND FAMILY PROTEIN
AT3G22480

Predicted

interaction prediction

Synthetic Lethality

interologs mapping

Phenotypic Enhancement

FSW = 0.0570

Unknown

 PREFOLDIN-RELATED KE2 FAMILY PROTEIN
AT3G49650

Predicted

Synthetic Lethality

FSW = 0.0185

Unknown

 KINESIN MOTOR PROTEIN-RELATED
AT4G10360

Predicted

Phenotypic Enhancement

FSW = 0.0054

Unknown

 FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRAM LAG1 AND CLN8 HOMOLOGY (INTERPROIPR006634) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G313002) HAS 453 BLAST HITS TO 451 PROTEINS IN 101 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 225 FUNGI - 97 PLANTS - 91 VIRUSES - 3 OTHER EUKARYOTES - 37 (SOURCE NCBI BLINK)
AT1G04160

Predicted

Synthetic Lethality

FSW = 0.0119

Unknown

 XIB (MYOSIN XI B) MOTOR
AT5G23290

Predicted

interaction prediction

Synthetic Lethality

FSW = 0.0694

Unknown

 PDF5 (PREFOLDIN 5) UNFOLDED PROTEIN BINDING
AT5G49510

Predicted

interaction prediction

Synthetic Lethality

FSW = 0.0466

Unknown

 PDF3 (PREFOLDIN 3) UNFOLDED PROTEIN BINDING
AT1G12450

Predicted

interologs mapping

FSW = 0.0270

Unknown

 FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SNARE ASSOCIATED GOLGI PROTEIN (INTERPROIPR015414) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT4G228501) HAS 1233 BLAST HITS TO 1230 PROTEINS IN 347 SPECIES ARCHAE - 2 BACTERIA - 557 METAZOA - 104 FUNGI - 72 PLANTS - 132 VIRUSES - 0 OTHER EUKARYOTES - 366 (SOURCE NCBI BLINK)
AT4G21070

Predicted

two hybrid

FSW = 0.0137

Unknown

 ATBRCA1 UBIQUITIN-PROTEIN LIGASE
AT1G22370

Predicted

two hybrid

FSW = 0.0270

Unknown

 ATUGT85A5 (UDP-GLUCOSYL TRANSFERASE 85A5) GLUCURONOSYLTRANSFERASE/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G24190

Predicted

two hybrid

FSW = 0.0086

Unknown

 SNL3 (SIN3-LIKE 3) TRANSCRIPTION REPRESSOR
AT5G35700

Predicted

interaction prediction

FSW = 0.0541

Unknown

 FIM2 (FIMBRIN-LIKE PROTEIN 2) ACTIN BINDING
AT4G27640

Predicted

interaction prediction

FSW = 0.0395

Unknown

 IMPORTIN BETA-2 SUBUNIT FAMILY PROTEIN
AT4G34490

Predicted

interaction prediction

FSW = 0.0060

Unknown

 ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1) ACTIN BINDING
AT1G72340

Predicted

interaction prediction

FSW = 0.0138

Unknown

 EUKARYOTIC TRANSLATION INITIATION FACTOR 2B FAMILY PROTEIN / EIF-2B FAMILY PROTEIN
AT1G64550

Predicted

interaction prediction

FSW = 0.0168

Unknown

 ATGCN3 TRANSPORTER
AT1G01960

Predicted

interaction prediction

FSW = 0.0178

Unknown

 EDA10 (EMBRYO SAC DEVELOPMENT ARREST 10) ARF GUANYL-NUCLEOTIDE EXCHANGE FACTOR/ BINDING / GUANYL-NUCLEOTIDE EXCHANGE FACTOR
AT1G52250Predicted

Phylogenetic profile method

Co-expression

FSW = 0.0454

Unknown

 EDA10 (EMBRYO SAC DEVELOPMENT ARREST 10) ARF GUANYL-NUCLEOTIDE EXCHANGE FACTOR/ BINDING / GUANYL-NUCLEOTIDE EXCHANGE FACTOR
AT3G16120

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.0454

Unknown

 DYNEIN LIGHT CHAIN PUTATIVE
AT4G27360

Predicted

Gene fusion method

Gene neighbors method

Phylogenetic profile method

FSW = 0.1053

Unknown

 DYNEIN LIGHT CHAIN PUTATIVE

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Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

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