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AT4G25340 - ( immunophilin-related / FKBP-type peptidyl-prolyl cis-trans isomerase-related )

150 Proteins interacs with AT4G25340

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT5G65430	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1626	Class C: nucleus	GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G74710	Predicted synthetic growth defect	FSW = 0.1541	Class C: nucleus	ISOCHORISMATE SYNTHASE 1 (ICS1) / ISOCHORISMATE MUTASE
AT1G55920	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1164	Class C: nucleus	ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE
AT5G60540	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.3916	Class C: nucleus	PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT5G41370	Predicted interologs mapping	FSW = 0.0258	Class C: nucleus	XPB1 (ARABIDOPSIS HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1) ATP BINDING / ATP-DEPENDENT DNA HELICASE/ ATP-DEPENDENT HELICASE/ DNA BINDING / HELICASE/ HYDROLASE/ NUCLEIC ACID BINDING
AT5G57015	Predicted Affinity Capture-MS interaction prediction Enriched domain pair	FSW = 0.0156	Class C: nucleus	CKL12 (CASEIN KINASE I-LIKE 12) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT2G44680	Predicted biochemical	FSW = 0.0402	Class C: nucleus	CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE
AT2G45490	Predicted biochemical	FSW = 0.0170	Class C: nucleus	ATAUR3 (ATAURORA3) ATP BINDING / HISTONE KINASE(H3-S10 SPECIFIC) / PROTEIN KINASE
AT1G21700	Predicted Phenotypic Enhancement	FSW = 0.0899	Class C: nucleus	ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C) DNA BINDING
AT4G34430	Predicted Affinity Capture-MS	FSW = 0.0258	Class C: nucleus	CHB3 DNA BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING
AT2G44860	Predicted Affinity Capture-MS	FSW = 0.0087	Class C: nucleus	60S RIBOSOMAL PROTEIN L24 PUTATIVE
AT5G04600	Predicted Affinity Capture-MS	FSW = 0.0093	Class C: nucleus	RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT3G50670	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0147	Class C: nucleus	U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K) RNA BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT3G57660	Predicted Co-purification	FSW = 0.0322	Class C: nucleus	NRPA1 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ ZINC ION BINDING
AT3G13445	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1624	Class C: nucleus	TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT3G52250	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.2135	Class C: nucleus	DNA BINDING / TRANSCRIPTION FACTOR
AT5G37720	Predicted Affinity Capture-MS	FSW = 0.0317	Class C: nucleus	RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE
AT4G09800	Predicted Phenotypic Enhancement	FSW = 0.1180	Class C: nucleus	RPS18C (S18 RIBOSOMAL PROTEIN) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G62310	Predicted Affinity Capture-MS	FSW = 0.0181	Class C: nucleus	RNA HELICASE PUTATIVE
AT1G28460	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1596	Class C: nucleus	AGL59 (AGAMOUS-LIKE 59) DNA BINDING / TRANSCRIPTION FACTOR
AT2G37470	Predicted Affinity Capture-Western	FSW = 0.0102	Class C: nucleus	HISTONE H2B PUTATIVE
AT5G60980	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1133	Class C: nucleus	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT5G09590	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.2386	Unknown	MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT4G16660	Predicted Phenotypic Enhancement	FSW = 0.3211	Unknown	HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE
AT4G12650	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0996	Unknown	LOCATED IN INTEGRAL TO MEMBRANE GOLGI APPARATUS PLASMA MEMBRANE VACUOLE EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NONASPANIN (TM9SF) (INTERPROIPR004240) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G351601) HAS 983 BLAST HITS TO 980 PROTEINS IN 161 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 434 FUNGI - 144 PLANTS - 228 VIRUSES - 0 OTHER EUKARYOTES - 177 (SOURCE NCBI BLINK)
AT5G10350	Predicted Affinity Capture-Western synthetic growth defect Affinity Capture-Western Reconstituted Complex	FSW = 0.1622	Unknown	POLYADENYLATE-BINDING PROTEIN FAMILY PROTEIN / PABP FAMILY PROTEIN
AT3G22110	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1254	Unknown	PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT5G13450	Predicted Synthetic Lethality	FSW = 0.1089	Unknown	ATP SYNTHASE DELTA CHAIN MITOCHONDRIAL PUTATIVE / H(+)-TRANSPORTING TWO-SECTOR ATPASE DELTA (OSCP) SUBUNIT PUTATIVE
AT5G58060	Predicted Synthetic Lethality	FSW = 0.0025	Unknown	YKT61
AT1G11870	Predicted Phenotypic Enhancement	FSW = 0.0579	Unknown	SRS (SERYL-TRNA SYNTHETASE) SERINE-TRNA LIGASE
AT3G55400	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.0713	Unknown	OVA1 (OVULE ABORTION 1) ATP BINDING / AMINOACYL-TRNA LIGASE/ METHIONINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT3G44610	Predicted Affinity Capture-MS	FSW = 0.0388	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT3G44620	Predicted Affinity Capture-Western Reconstituted Complex biochemical	FSW = 0.0149	Unknown	PROTEIN TYROSINE PHOSPHATASE
AT3G56160	Predicted Phenotypic Enhancement	FSW = 0.0422	Unknown	BILE ACIDSODIUM SYMPORTER
AT3G27740	Predicted pull down	FSW = 0.0095	Unknown	CARA (CARBAMOYL PHOSPHATE SYNTHETASE A) CARBAMOYL-PHOSPHATE SYNTHASE (GLUTAMINE-HYDROLYZING)/ CARBAMOYL-PHOSPHATE SYNTHASE/ CATALYTIC
AT5G24020	Predicted pull down	FSW = 0.0069	Unknown	MIND ATPASE/ CALCIUM-DEPENDENT ATPASE/ PROTEIN BINDING / PROTEIN HOMODIMERIZATION
AT1G56050	Predicted Phenotypic Enhancement	FSW = 0.1654	Unknown	GTP-BINDING PROTEIN-RELATED
AT3G14930	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0156	Unknown	HEME1 UROPORPHYRINOGEN DECARBOXYLASE
AT5G15450	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1373	Unknown	CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
ATCG00380	Predicted pull down	FSW = 0.0032	Unknown	CHLOROPLAST ENCODED RIBOSOMAL PROTEIN S4
AT4G35830	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0078	Unknown	ACONITATE HYDRATASE CYTOPLASMIC / CITRATE HYDRO-LYASE / ACONITASE (ACO)
AT4G36490	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1699	Unknown	SFH12 (SEC14-LIKE 12) PHOSPHATIDYLINOSITOL TRANSPORTER/ TRANSPORTER
AT5G52640	Predicted Affinity Capture-MS synthetic growth defect	FSW = 0.0165	Unknown	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT2G32670	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Synthetic Lethality Affinity Capture-MS Synthetic Lethality Phenotypic Enhancement	FSW = 0.3229	Unknown	ATVAMP725
AT1G04750	Predicted synthetic growth defect	FSW = 0.1844	Unknown	VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)
AT4G24400	Predicted Affinity Capture-MS	FSW = 0.0149	Unknown	CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) KINASE/ PROTEIN KINASE
AT4G21680	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1076	Unknown	PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN
AT2G39480	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0233	Unknown	PGP6 (P-GLYCOPROTEIN 6) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT3G48760	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0401	Unknown	ZINC FINGER (DHHC TYPE) FAMILY PROTEIN
AT2G37790	Predicted synthetic growth defect	FSW = 0.1957	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G80050	Predicted Phenotypic Suppression	FSW = 0.1736	Unknown	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) ADENINE PHOSPHORIBOSYLTRANSFERASE/ PHOSPHATE TRANSMEMBRANE TRANSPORTER
AT4G18800	Predicted Phenotypic Enhancement	FSW = 0.1787	Unknown	ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D) GTP BINDING
AT3G04460	Predicted synthetic growth defect	FSW = 0.0877	Unknown	PEX12 PROTEIN BINDING / ZINC ION BINDING
AT1G70320	Predicted interologs mapping interologs mapping	FSW = 0.0180	Unknown	UPL2 (UBIQUITIN-PROTEIN LIGASE 2) UBIQUITIN-PROTEIN LIGASE
AT5G47630	Predicted Affinity Capture-MS	FSW = 0.0910	Unknown	MTACP3 (MITOCHONDRIAL ACYL CARRIER PROTEIN 3) ACYL CARRIER/ COFACTOR BINDING
AT3G49920	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1799	Unknown	VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5) VOLTAGE-GATED ANION CHANNEL
AT2G17270	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0413	Unknown	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT2G30160	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.3219	Unknown	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT1G64880	Predicted Phenotypic Enhancement	FSW = 0.0609	Unknown	RIBOSOMAL PROTEIN S5 FAMILY PROTEIN
AT2G19980	Predicted Phenotypic Enhancement	FSW = 0.2513	Unknown	ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT3G54840	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement synthetic growth defect	FSW = 0.1940	Unknown	ARA6 GTP BINDING / GTPASE
AT3G07140	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1498	Unknown	GPI TRANSAMIDASE COMPONENT GPI16 SUBUNIT FAMILY PROTEIN
AT3G60360	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Synthetic Lethality Affinity Capture-MS Synthetic Lethality	FSW = 0.3344	Unknown	EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14)
AT4G39200	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement synthetic growth defect	FSW = 0.3028	Unknown	40S RIBOSOMAL PROTEIN S25 (RPS25E)
AT4G16420	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Synthetic Rescue	FSW = 0.1811	Unknown	ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR
AT1G50920	Predicted Affinity Capture-MS	FSW = 0.0171	Unknown	GTP-BINDING PROTEIN-RELATED
AT4G26840	Predicted Affinity Capture-MS	FSW = 0.0062	Unknown	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) PROTEIN BINDING / PROTEIN TAG
AT1G16470	Predicted Affinity Capture-MS	FSW = 0.0083	Unknown	PAB1 (PROTEASOME SUBUNIT PAB1) ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT1G62800	Predicted Phenotypic Enhancement	FSW = 0.1091	Unknown	ASP4 (ASPARTATE AMINOTRANSFERASE 4) CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING / TRANSAMINASE/ TRANSFERASE TRANSFERRING NITROGENOUS GROUPS
AT2G29540	Predicted Synthetic Lethality	FSW = 0.1568	Unknown	ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT4G17190	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1998	Unknown	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT2G04560	Predicted pull down	FSW = 0.0070	Unknown	TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT2G01440	Predicted pull down	FSW = 0.0156	Unknown	ATP BINDING / ATP-DEPENDENT DNA HELICASE/ ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING
AT5G37530	Predicted pull down	FSW = 0.0069	Unknown	THIF FAMILY PROTEIN
AT1G02100	Predicted Phenotypic Suppression	FSW = 0.0924	Unknown	LEUCINE CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
AT1G13580	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.2876	Unknown	LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)
AT1G20693	Predicted Phenotypic Suppression	FSW = 0.3249	Unknown	HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G23460	Predicted Phenotypic Enhancement	FSW = 0.1349	Unknown	POLYGALACTURONASE
AT1G25155	Predicted Phenotypic Enhancement synthetic growth defect	FSW = 0.2463	Unknown	ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT1G26690	Predicted Phenotypic Enhancement synthetic growth defect	FSW = 0.1654	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT1G27040	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1968	Unknown	NITRATE TRANSPORTER PUTATIVE
AT1G29970	Predicted Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western	FSW = 0.2546	Unknown	RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)
AT1G34580	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0858	Unknown	MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G44180	Predicted Phenotypic Enhancement	FSW = 0.0818	Unknown	AMINOACYLASE PUTATIVE / N-ACYL-L-AMINO-ACID AMIDOHYDROLASE PUTATIVE
AT1G55255	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0061	Unknown	AMINOACYLASE PUTATIVE / N-ACYL-L-AMINO-ACID AMIDOHYDROLASE PUTATIVE
AT1G55300	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.2945	Unknown	TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G57620	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0401	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT1G61040	Predicted Phenotypic Enhancement	FSW = 0.0218	Unknown	VIP5 (VERNALIZATION INDEPENDENCE 5) DNA BINDING
AT1G68020	Predicted Phenotypic Enhancement	FSW = 0.2100	Unknown	ATTPS6 ALPHAALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT1G80510	Predicted Phenotypic Suppression	FSW = 0.0304	Unknown	AMINO ACID TRANSPORTER FAMILY PROTEIN
AT2G03130	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.3003	Unknown	RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G31260	Predicted Phenotypic Enhancement	FSW = 0.1186	Unknown	APG9 (AUTOPHAGY 9)
AT2G33560	Predicted Co-purification	FSW = 0.0661	Unknown	SPINDLE CHECKPOINT PROTEIN-RELATED
AT2G35390	Predicted Affinity Capture-MS	FSW = 0.0382	Unknown	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1 / PHOSPHORIBOSYL DIPHOSPHATE SYNTHETASE 1 (PRSI)
AT2G37420	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.3582	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT2G38490	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0631	Unknown	CIPK22 (CBL-INTERACTING PROTEIN KINASE 22) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G02000	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1760	Unknown	ROXY1 DISULFIDE OXIDOREDUCTASE
AT3G06483	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western	FSW = 0.2666	Unknown	PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE
AT3G11230	Predicted synthetic growth defect Phenotypic Suppression	FSW = 0.2802	Unknown	YIPPEE FAMILY PROTEIN
AT3G13210	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1398	Unknown	CROOKED NECK PROTEIN PUTATIVE / CELL CYCLE PROTEIN PUTATIVE
AT3G18860	Predicted Phenotypic Suppression	FSW = 0.0247	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G21460	Predicted synthetic growth defect Synthetic Lethality Synthetic Lethality synthetic growth defect	FSW = 0.1549	Unknown	ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE
AT3G24010	Predicted Synthetic Lethality Affinity Capture-Western Synthetic Lethality	FSW = 0.2110	Unknown	ING1 (INHIBITOR OF GROWTH 1) DNA BINDING / METHYLATED HISTONE RESIDUE BINDING
AT3G25900	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1638	Unknown	HMT-1 HOMOCYSTEINE S-METHYLTRANSFERASE
AT3G27440	Predicted Phenotypic Suppression	FSW = 0.1193	Unknown	URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE
AT3G62760	Predicted two hybrid Co-purification	FSW = 0.0599	Unknown	ATGSTF13 GLUTATHIONE TRANSFERASE
AT4G00800	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.2718	Unknown	BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G04210	Predicted Synthetic Lethality Synthetic Lethality Affinity Capture-MS	FSW = 0.0250	Unknown	PUX4 PROTEIN BINDING
AT4G04700	Predicted two hybrid co-fractionation Co-fractionation	FSW = 0.0894	Unknown	CPK27 ATP BINDING / CALCIUM ION BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G10360	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.0914	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRAM LAG1 AND CLN8 HOMOLOGY (INTERPROIPR006634) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G313002) HAS 453 BLAST HITS TO 451 PROTEINS IN 101 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 225 FUNGI - 97 PLANTS - 91 VIRUSES - 3 OTHER EUKARYOTES - 37 (SOURCE NCBI BLINK)
AT4G13020	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1567	Unknown	MHK ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G15410	Predicted Phenotypic Suppression	FSW = 0.0337	Unknown	PUX5 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B PRIME GAMMA) PROTEIN BINDING
AT4G19560	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1444	Unknown	CYCT12 CYCLIN-DEPENDENT PROTEIN KINASE
AT4G22140	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0411	Unknown	DNA BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G22756	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0030	Unknown	SMO1-2 (STEROL C4-METHYL OXIDASE 1-2) 44-DIMETHYL-9BETA19-CYCLOPROPYLSTEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE/ CATALYTIC
AT4G24160	Predicted Phenotypic Enhancement	FSW = 0.0723	Unknown	HYDROLASE ALPHA/BETA FOLD FAMILY PROTEIN
AT1G09600	Predicted Affinity Capture-MS	FSW = 0.0174	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT1G67190	Predicted Affinity Capture-MS	FSW = 0.0125	Unknown	F-BOX FAMILY PROTEIN
AT2G23070	Predicted biochemical	FSW = 0.0251	Unknown	CASEIN KINASE II ALPHA CHAIN PUTATIVE
AT2G23820	Predicted Phenotypic Enhancement	FSW = 0.0358	Unknown	METAL-DEPENDENT PHOSPHOHYDROLASE HD DOMAIN-CONTAINING PROTEIN
AT2G34750	Predicted Affinity Capture-Western Co-purification	FSW = 0.2497	Unknown	RNA POLYMERASE I SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3 FAMILY PROTEIN
AT2G39840	Predicted Affinity Capture-MS Affinity Capture-Western interaction prediction Enriched domain pair Co-expression	FSW = 0.0193	Unknown	TOPP4 PROTEIN SERINE/THREONINE PHOSPHATASE
AT2G40430	Predicted Affinity Capture-MS	FSW = 0.0208	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TUMOR SUPPRESSOR PROTEIN GLTSCR2 (INTERPROIPR011211) P60-LIKE (INTERPROIPR011687) HAS 601 BLAST HITS TO 544 PROTEINS IN 148 SPECIES ARCHAE - 0 BACTERIA - 22 METAZOA - 201 FUNGI - 103 PLANTS - 32 VIRUSES - 0 OTHER EUKARYOTES - 243 (SOURCE NCBI BLINK)
AT3G01590	Predicted Affinity Capture-MS	FSW = 0.0117	Unknown	ALDOSE 1-EPIMERASE FAMILY PROTEIN
AT3G03900	Predicted Affinity Capture-MS	FSW = 0.0116	Unknown	ADENYLYLSULFATE KINASE PUTATIVE
AT3G13720	Predicted Phenotypic Enhancement	FSW = 0.0340	Unknown	PRA8
AT3G25230	Predicted Phenotypic Suppression	FSW = 0.0046	Unknown	ROF1 (ROTAMASE FKBP 1) FK506 BINDING / CALMODULIN BINDING / PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT4G14710	Predicted Phenotypic Enhancement	FSW = 0.0596	Unknown	ACIREDUCTONE DIOXYGENASE [IRON(II)-REQUIRING]/ METAL ION BINDING
AT4G23420	Predicted Phenotypic Suppression	FSW = 0.0563	Unknown	SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN
AT4G27130	Predicted Phenotypic Enhancement	FSW = 0.2269	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT4G30870	Predicted Affinity Capture-MS	FSW = 0.0076	Unknown	MUS81 (MMS AND UV SENSITIVE 81) ENDONUCLEASE/ NUCLEIC ACID BINDING
AT4G38250	Predicted Synthetic Lethality two hybrid Synthetic Lethality	FSW = 0.1756	Unknown	AMINO ACID TRANSPORTER FAMILY PROTEIN
AT5G14060	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.3210	Unknown	CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE
AT5G16980	Predicted Phenotypic Enhancement	FSW = 0.2538	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G45620	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2541	Unknown	26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9)
AT5G49560	Predicted Phenotypic Suppression	FSW = 0.0447	Unknown	UNKNOWN PROTEIN
AT5G57240	Predicted Affinity Capture-MS	FSW = 0.0071	Unknown	ORP4C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4C) OXYSTEROL BINDING
AT5G67540	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1736	Unknown	GLYCOSYL HYDROLASE FAMILY PROTEIN 43
AT5G01430	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1998	Unknown	GOT1-LIKE FAMILY PROTEIN
AT5G01770	Predicted Phenotypic Suppression	FSW = 0.1817	Unknown	RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING
AT5G06600	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1063	Unknown	UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12) UBIQUITIN THIOLESTERASE/ UBIQUITIN-SPECIFIC PROTEASE
AT5G14180	Predicted Phenotypic Enhancement	FSW = 0.2715	Unknown	MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1) CATALYTIC
AT5G16040	Predicted Affinity Capture-MS	FSW = 0.0294	Unknown	REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN
AT5G39500	Predicted Phenotypic Enhancement	FSW = 0.0340	Unknown	PATTERN FORMATION PROTEIN PUTATIVE
AT5G41700	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0823	Unknown	UBC8 (UBIQUITIN CONJUGATING ENZYME 8) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G44830	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.2487	Unknown	GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN
AT5G49970	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.2079	Unknown	ATPPOX (A THALIANA PYRIDOXIN (PYRODOXAMINE) 5-PHOSPHATE OXIDASE) PYRIDOXAMINE-PHOSPHATE OXIDASE
AT5G64760	Predicted Phenotypic Enhancement	FSW = 0.2556	Unknown	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)
AT5G67380	Predicted interaction prediction Enriched domain pair Co-expression	FSW = 0.0183	Unknown	CKA1 (CASEIN KINASE ALPHA 1) KINASE
AT5G39770	Predicted interaction prediction	FSW = 0.0037	Unknown	DNA BINDING / ENDONUCLEASE/ NUCLEASE/ NUCLEIC ACID BINDING / PROTEIN BINDING

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT4G25340 - ( immunophilin-related / FKBP-type peptidyl-prolyl cis-trans isomerase-related )

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