Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT4G31770 - ( calcineurin-like phosphoesterase family protein )

46 Proteins interacs with AT4G31770
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G01280

Predicted

Affinity Capture-MS

FSW = 0.2950

Unknown

VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1) VOLTAGE-GATED ANION CHANNEL
AT1G14010

Predicted

Affinity Capture-MS

FSW = 0.4006

Unknown

EMP24/GP25L/P24 FAMILY PROTEIN
AT3G59280

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0864

Unknown

TXR1 (THAXTOMIN A RESISTANT 1)
AT3G09820

Predicted

Affinity Capture-MS

Affinity Capture-MS

Co-purification

Affinity Capture-MS

Affinity Capture-MS

Co-purification

FSW = 0.5134

Unknown

ADK1 (ADENOSINE KINASE 1) ADENOSINE KINASE/ COPPER ION BINDING
AT5G15450

Predicted

Affinity Capture-MS

FSW = 0.1310

Unknown

CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT1G23740

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0448

Unknown

OXIDOREDUCTASE ZINC-BINDING DEHYDROGENASE FAMILY PROTEIN
AT4G30950

Predicted

Affinity Capture-MS

FSW = 0.0121

Unknown

FAD6 (FATTY ACID DESATURASE 6) OMEGA-6 FATTY ACID DESATURASE
AT2G42590

Predicted

synthetic growth defect

FSW = 0.0090

Unknown

GRF9 (GENERAL REGULATORY FACTOR 9) CALCIUM ION BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT4G08690

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4676

Unknown

SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT5G12480

Predicted

biochemical

FSW = 0.0124

Unknown

CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT1G63110

Predicted

Affinity Capture-MS

FSW = 0.3010

Unknown

CELL DIVISION CYCLE PROTEIN-RELATED
AT5G45380

Predicted

Affinity Capture-MS

FSW = 0.4066

Unknown

SODIUMSOLUTE SYMPORTER FAMILY PROTEIN
AT2G29140

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0598

Unknown

APUM3 (ARABIDOPSIS PUMILIO 3) RNA BINDING / BINDING
AT3G46900

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4938

Unknown

COPT2 COPPER ION TRANSMEMBRANE TRANSPORTER/ HIGH AFFINITY COPPER ION TRANSMEMBRANE TRANSPORTER
AT5G59960

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.5502

Unknown

UNKNOWN PROTEIN
AT1G06960

Predicted

Affinity Capture-MS

FSW = 0.0980

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN U2B PUTATIVE / SPLICEOSOMAL PROTEIN PUTATIVE
AT1G30810

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4804

Unknown

TRANSCRIPTION FACTOR
AT3G08980

Predicted

Affinity Capture-MS

FSW = 0.4651

Unknown

SIGNAL PEPTIDASE I FAMILY PROTEIN
AT4G21160

Predicted

Affinity Capture-MS

FSW = 0.0218

Unknown

ZAC ARF GTPASE ACTIVATOR/ PHOSPHOLIPID BINDING
AT4G17190

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.1398

Unknown

FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT3G27530

Predicted

two hybrid

two hybrid

FSW = 0.0044

Unknown

GC6 (GOLGIN CANDIDATE 6) BINDING / PROTEIN TRANSPORTER
AT1G05830

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.3844

Unknown

ATX2 (ARABIDOPSIS TRITHORAX-LIKE PROTEIN 2) DNA BINDING / HISTONE METHYLTRANSFERASE(H3-K4 SPECIFIC)
AT1G10350

Predicted

Affinity Capture-MS

FSW = 0.3706

Unknown

DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT1G21370

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2211

Unknown

UNKNOWN PROTEIN
AT1G74250

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.5902

Unknown

DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT2G20410

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.5081

Unknown

ACTIVATING SIGNAL COINTEGRATOR-RELATED
AT2G29680

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.5918

Unknown

CDC6 (CELL DIVISION CONTROL 6)
AT2G29940

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.5550

Unknown

PDR3 (PLEIOTROPIC DRUG RESISTANCE 3) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT3G05760

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.3649

Unknown

NUCLEIC ACID BINDING / ZINC ION BINDING
AT4G29910

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.5401

Unknown

ORC5 (ORIGIN RECOGNITION COMPLEX PROTEIN 5) PROTEIN BINDING
AT1G06790

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.3322

Unknown

RNA POLYMERASE RPB7 N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT1G09270

Predicted

two hybrid

FSW = 0.0211

Unknown

IMPA-4 (IMPORTIN ALPHA ISOFORM 4) BINDING / PROTEIN TRANSPORTER
AT1G18550

Predicted

Affinity Capture-MS

FSW = 0.2506

Unknown

ATP BINDING / MICROTUBULE MOTOR
AT3G52590Predicted

Affinity Capture-MS

FSW = 0.4571

Unknown

UBQ1 (UBIQUITIN EXTENSION PROTEIN 1) PROTEIN BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G53880

Predicted

Co-purification

FSW = 0.3653

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT4G00810

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4358

Unknown

60S ACIDIC RIBOSOMAL PROTEIN P1 (RPP1B)
AT5G10260

Predicted

Phenotypic Enhancement

FSW = 0.0034

Unknown

ATRABH1E (ARABIDOPSIS RAB GTPASE HOMOLOG H1E) GTP BINDING
AT5G49970

Predicted

Affinity Capture-MS

FSW = 0.1851

Unknown

ATPPOX (A THALIANA PYRIDOXIN (PYRODOXAMINE) 5-PHOSPHATE OXIDASE) PYRIDOXAMINE-PHOSPHATE OXIDASE
AT5G61010

Predicted

two hybrid

FSW = 0.0147

Unknown

ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2) PROTEIN BINDING
AT5G13780

Predicted

Phenotypic Suppression

FSW = 0.0149

Unknown

GCN5-RELATED N-ACETYLTRANSFERASE PUTATIVE
AT5G16960

Predicted

Affinity Capture-MS

FSW = 0.4251

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G26680

Predicted

Phenotypic Enhancement

FSW = 0.0043

Unknown

ENDONUCLEASE PUTATIVE
AT5G55090

Predicted

Phenotypic Suppression

FSW = 0.0121

Unknown

MAPKKK15 ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G56510

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0546

Unknown

APUM12 (ARABIDOPSIS PUMILIO 12) RNA BINDING / BINDING
AT5G59890

Predicted

Affinity Capture-MS

FSW = 0.3062

Unknown

ADF4 (ACTIN DEPOLYMERIZING FACTOR 4) ACTIN BINDING
AT2G23070

Predicted

synthetic growth defect

FSW = 0.0238

Unknown

CASEIN KINASE II ALPHA CHAIN PUTATIVE

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454