Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT4G33650 - ( DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP binding / GTPase/ phosphoinositide binding )

98 Proteins interacs with AT4G33650
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT2G14120

Experimental

two hybrid

confocal microscopy

FSW = 0.0463

Class A:

mitochondrion

cytosol

Class B:

plastid

plasma membrane

peroxisome

Class D:

plastid (p = 0.78)

nucleus (p = 0.78)

cytosol (p = 0.67)

DYNAMIN-LIKE PROTEIN 2B (ADL2B)
AT3G19720

Experimental

Affinity Capture-Western

FSW = 0.0220

Unknown

ARC5 (ACCUMULATION AND REPLICATION OF CHLOROPLAST 5) GTP BINDING / GTPASE
AT5G67500

Predicted

Synthetic Rescue

FSW = 0.0413

Class C:

plastid

mitochondrion

VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2) VOLTAGE-GATED ANION CHANNEL
AT1G07890

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.0752

Class C:

plastid

cytosol

APX1 (ASCORBATE PEROXIDASE 1) L-ASCORBATE PEROXIDASE
AT3G09200

Predicted

Synthetic Lethality

FSW = 0.0419

Class C:

plastid

60S ACIDIC RIBOSOMAL PROTEIN P0 (RPP0B)
AT5G15200

Predicted

biochemical

Synthetic Lethality

FSW = 0.0283

Class C:

plastid

40S RIBOSOMAL PROTEIN S9 (RPS9B)
AT3G22890

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1680

Class C:

plastid

APS1 (ATP SULFURYLASE 1) SULFATE ADENYLYLTRANSFERASE (ATP)
AT5G51820

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1814

Class C:

plastid

PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE
AT3G56160Predicted

Synthetic Rescue

FSW = 0.0509

Class C:

plastid

BILE ACIDSODIUM SYMPORTER
AT5G06290

Predicted

interologs mapping

FSW = 0.0427

Class C:

plastid

2-CYS PRX B (2-CYSTEINE PEROXIREDOXIN B) ANTIOXIDANT/ PEROXIREDOXIN
AT1G48860

Predicted

Synthetic Rescue

FSW = 0.2257

Class C:

plastid

3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE PUTATIVE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PUTATIVE / EPSP SYNTHASE PUTATIVE
AT5G25400

Predicted

Phenotypic Enhancement

synthetic growth defect

FSW = 0.1818

Class C:

plastid

PHOSPHATE TRANSLOCATOR-RELATED
AT1G07180

Predicted

Synthetic Lethality

FSW = 0.0202

Class C:

peroxisome

mitochondrion

NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1) NADH DEHYDROGENASE
AT1G45145

Predicted

Phenotypic Enhancement

FSW = 0.0895

Class C:

peroxisome

ATTRX5 OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR
AT5G63400

Predicted

two hybrid

synthetic growth defect

FSW = 0.0338

Class C:

mitochondrion

ADK1 (ADENYLATE KINASE 1) ATP BINDING / ADENYLATE KINASE/ NUCLEOBASE NUCLEOSIDE NUCLEOTIDE KINASE/ NUCLEOTIDE KINASE/ PHOSPHOTRANSFERASE PHOSPHATE GROUP AS ACCEPTOR
AT3G60190

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.0214

Class C:

mitochondrion

ADL1E (ARABIDOPSIS DYNAMIN-LIKE 1E) GTP BINDING / GTPASE
AT4G26910

Predicted

Affinity Capture-MS

FSW = 0.0175

Class C:

mitochondrion

2-OXOACID DEHYDROGENASE FAMILY PROTEIN
AT2G47510

Predicted

Affinity Capture-MS

FSW = 0.0211

Class C:

mitochondrion

FUM1 (FUMARASE 1) CATALYTIC/ FUMARATE HYDRATASE
AT2G30160

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1314

Class C:

mitochondrion

MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT5G60540

Predicted

Synthetic Lethality

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.1680

Class C:

cytosol

PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT3G55810

Predicted

Affinity Capture-MS

FSW = 0.0067

Class C:

cytosol

PYRUVATE KINASE PUTATIVE
AT5G66680

Predicted

two hybrid

FSW = 0.0094

Unknown

DGL1 DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE-PROTEIN GLYCOTRANSFERASE
AT2G37270

Predicted

biochemical

FSW = 0.0248

Unknown

ATRPS5B (RIBOSOMAL PROTEIN 5B) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G62870

Predicted

Synthetic Lethality

synthetic growth defect

Affinity Capture-MS

FSW = 0.0641

Unknown

60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT1G14320

Predicted

Synthetic Rescue

FSW = 0.0166

Unknown

SAC52 (SUPPRESSOR OF ACAULIS 52) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G74560

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2308

Unknown

NRP1 (NAP1-RELATED PROTEIN 1) DNA BINDING / CHROMATIN BINDING / HISTONE BINDING
AT1G27450

Predicted

Synthetic Lethality

FSW = 0.0544

Unknown

APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1) ADENINE PHOSPHORIBOSYLTRANSFERASE
AT4G35950

Predicted

biochemical

FSW = 0.0544

Unknown

ARAC6 (ARABIDOPSIS RAC-LIKE 6) GTP BINDING
AT3G10540

Predicted

Synthetic Lethality

FSW = 0.0235

Unknown

3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE PUTATIVE
AT1G80050

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2414

Unknown

APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) ADENINE PHOSPHORIBOSYLTRANSFERASE/ PHOSPHATE TRANSMEMBRANE TRANSPORTER
AT3G02740

Predicted

two hybrid

FSW = 0.0332

Unknown

ASPARTYL PROTEASE FAMILY PROTEIN
AT5G41060

Predicted

Synthetic Lethality

FSW = 0.0296

Unknown

ZINC FINGER (DHHC TYPE) FAMILY PROTEIN
AT5G26340

Predicted

Phenotypic Suppression

FSW = 0.0387

Unknown

MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT3G50670

Predicted

Affinity Capture-MS

FSW = 0.0175

Unknown

U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K) RNA BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT5G06550

Predicted

two hybrid

FSW = 0.0364

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN CELL SURFACE RECEPTOR LINKED SIGNAL TRANSDUCTION EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 12 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CYCLIN-LIKE F-BOX (INTERPROIPR001810) TRANSCRIPTION FACTOR JUMONJI/ASPARTYL BETA-HYDROXYLASE (INTERPROIPR003347) TRANSCRIPTION FACTOR JUMONJI (INTERPROIPR013129) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS TRANSFERASE TRANSFERRING GLYCOSYL GROUPS (TAIRAT1G782801) HAS 1299 BLAST HITS TO 1289 PROTEINS IN 204 SPECIES ARCHAE - 0 BACTERIA - 195 METAZOA - 777 FUNGI - 106 PLANTS - 94 VIRUSES - 0 OTHER EUKARYOTES - 127 (SOURCE NCBI BLINK)
AT3G45980

Predicted

Affinity Capture-MS

FSW = 0.0321

Unknown

HTB9 DNA BINDING
AT3G57240

Predicted

Affinity Capture-MS

FSW = 0.0271

Unknown

BG3 (BETA-13-GLUCANASE 3) CELLULASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G24090

Predicted

Synthetic Lethality

FSW = 0.0657

Unknown

ACIDIC ENDOCHITINASE (CHIB1)
AT2G19980

Predicted

Phenotypic Enhancement

FSW = 0.1523

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT2G47990

Predicted

Phenotypic Suppression

Synthetic Rescue

FSW = 0.0468

Unknown

SWA1 (SLOW WALKER1) NUCLEOTIDE BINDING
AT4G39200

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.1739

Unknown

40S RIBOSOMAL PROTEIN S25 (RPS25E)
AT1G17810

Predicted

Synthetic Lethality

FSW = 0.0090

Unknown

BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN) WATER CHANNEL
AT2G42120

Predicted

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

FSW = 0.1172

Unknown

POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT) DNA BINDING / DNA-DIRECTED DNA POLYMERASE
AT1G05180

Predicted

synthetic growth defect

FSW = 0.0263

Unknown

AXR1 (AUXIN RESISTANT 1) SMALL PROTEIN ACTIVATING ENZYME
AT4G17190

Predicted

Phenotypic Enhancement

FSW = 0.0712

Unknown

FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT2G43720

Predicted

two hybrid

FSW = 0.0158

Unknown

UNKNOWN PROTEIN
AT3G05740

Predicted

two hybrid

FSW = 0.0055

Unknown

RECQI1 (ARABIDOPSIS RECQ HELICASE L1) ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING
AT3G57350

Predicted

two hybrid

FSW = 0.0196

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN TRANSPORT LOCATED IN NUCLEAR PORE CONTAINS INTERPRO DOMAIN/S NUCLEOPORIN INTERACTING COMPONENT NUP93/NIC96 (INTERPROIPR007231) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS NUCLEOPORIN INTERACTING COMPONENT FAMILY PROTEIN (TAIRAT2G416201) HAS 234 BLAST HITS TO 230 PROTEINS IN 99 SPECIES ARCHAE - 0 BACTERIA - 3 METAZOA - 124 FUNGI - 76 PLANTS - 29 VIRUSES - 0 OTHER EUKARYOTES - 2 (SOURCE NCBI BLINK)
AT5G26751

Predicted

Affinity Capture-MS

two hybrid

FSW = 0.0145

Unknown

ATSK11 PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G57610

Predicted

in vivo

FSW = 0.0186

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT1G07340

Predicted

Synthetic Lethality

FSW = 0.0644

Unknown

ATSTP2 (SUGAR TRANSPORTER 2) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G10210

Predicted

Synthetic Lethality

FSW = 0.1488

Unknown

ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE
AT1G15440

Predicted

Affinity Capture-MS

FSW = 0.0580

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G25500

Predicted

Synthetic Lethality

FSW = 0.0153

Unknown

CHOLINE TRANSPORTER-RELATED
AT1G35350

Predicted

Phenotypic Enhancement

Synthetic Lethality

synthetic growth defect

FSW = 0.2086

Unknown

LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK)
AT1G52500

Predicted

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

FSW = 0.1992

Unknown

ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G55810

Predicted

Synthetic Lethality

FSW = 0.0132

Unknown

URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE
AT1G60680

Predicted

Synthetic Lethality

synthetic growth defect

FSW = 0.0738

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT2G01600

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

FSW = 0.2566

Unknown

EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN
AT2G31260

Predicted

Synthetic Lethality

FSW = 0.0774

Unknown

APG9 (AUTOPHAGY 9)
AT2G32160

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1477

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S N2227-LIKE (INTERPROIPR012901) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G321701) HAS 325 BLAST HITS TO 315 PROTEINS IN 141 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 95 FUNGI - 130 PLANTS - 30 VIRUSES - 0 OTHER EUKARYOTES - 70 (SOURCE NCBI BLINK)
AT2G37420

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1505

Unknown

KINESIN MOTOR PROTEIN-RELATED
AT2G46230

Predicted

Affinity Capture-MS

FSW = 0.0239

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF652 (INTERPROIPR006984) NUCLEOTIDE BINDING PROTEIN PINC (INTERPROIPR006596) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G265301) HAS 493 BLAST HITS TO 493 PROTEINS IN 165 SPECIES ARCHAE - 21 BACTERIA - 0 METAZOA - 192 FUNGI - 143 PLANTS - 53 VIRUSES - 0 OTHER EUKARYOTES - 84 (SOURCE NCBI BLINK)
AT2G48100

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1680

Unknown

EXONUCLEASE FAMILY PROTEIN
AT3G10360

Predicted

Synthetic Lethality

FSW = 0.0565

Unknown

APUM4 (ARABIDOPSIS PUMILIO 4) RNA BINDING / BINDING
AT3G12200

Predicted

Phenotypic Enhancement

FSW = 0.0506

Unknown

ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G19190

Predicted

Synthetic Lethality

FSW = 0.0158

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S ATG2 C-TERMINAL (INTERPROIPR015412) HAS 603 BLAST HITS TO 514 PROTEINS IN 156 SPECIES ARCHAE - 0 BACTERIA - 19 METAZOA - 326 FUNGI - 168 PLANTS - 38 VIRUSES - 0 OTHER EUKARYOTES - 52 (SOURCE NCBI BLINK)
AT3G22290

Predicted

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

Phenotypic Suppression

FSW = 0.2229

Unknown

UNKNOWN PROTEIN
AT3G29070

Predicted

Synthetic Lethality

FSW = 0.0332

Unknown

PROTEIN TRANSMEMBRANE TRANSPORTER
AT3G50960

Predicted

two hybrid

FSW = 0.0249

Unknown

PLP3A (PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG) BETA-TUBULIN BINDING
AT3G59540Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1886

Unknown

60S RIBOSOMAL PROTEIN L38 (RPL38B)
AT4G04700

Predicted

Synthetic Lethality

FSW = 0.0355

Unknown

CPK27 ATP BINDING / CALCIUM ION BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G19880

Predicted

Synthetic Lethality

FSW = 0.1494

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RESPONSE TO CADMIUM ION LOCATED IN CHLOROPLAST EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S GLUTATHIONE S-TRANSFERASE PREDICTED (INTERPROIPR016639) GLUTATHIONE S-TRANSFERASE C-TERMINAL (INTERPROIPR004046) GLUTATHIONE S-TRANSFERASE C-TERMINAL-LIKE (INTERPROIPR010987) GLUTATHIONE S-TRANSFERASE/CHLORIDE CHANNEL C-TERMINAL (INTERPROIPR017933) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G450201) HAS 1635 BLAST HITS TO 1635 PROTEINS IN 489 SPECIES ARCHAE - 12 BACTERIA - 905 METAZOA - 23 FUNGI - 158 PLANTS - 57 VIRUSES - 0 OTHER EUKARYOTES - 480 (SOURCE NCBI BLINK)
AT4G20020

Predicted

Synthetic Lethality

FSW = 0.0270

Unknown

UNKNOWN PROTEIN
AT4G27130

Predicted

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

FSW = 0.1918

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT1G06550

Predicted

Synthetic Rescue

Phenotypic Enhancement

FSW = 0.0665

Unknown

ENOYL-COA HYDRATASE/ISOMERASE FAMILY PROTEIN
AT1G11510

Predicted

synthetic growth defect

FSW = 0.0710

Unknown

DNA-BINDING STOREKEEPER PROTEIN-RELATED
AT1G29630

Predicted

Phenotypic Enhancement

FSW = 0.0517

Unknown

NUCLEASE
AT1G43910

Predicted

Affinity Capture-Western

Affinity Capture-Western

FSW = 0.2744

Unknown

AAA-TYPE ATPASE FAMILY PROTEIN
AT2G34180

Predicted

Synthetic Lethality

FSW = 0.0243

Unknown

CIPK13 (CBL-INTERACTING PROTEIN KINASE 13) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT2G47090

Predicted

Synthetic Lethality

FSW = 0.0440

Unknown

NUCLEIC ACID BINDING / PROTEIN BINDING / ZINC ION BINDING
AT3G27580

Predicted

two hybrid

FSW = 0.0168

Unknown

ATPK7 KINASE/ PROTEIN SERINE/THREONINE KINASE
AT3G58180

Predicted

two hybrid

FSW = 0.0214

Unknown

PBS LYASE HEAT-LIKE REPEAT-CONTAINING PROTEIN
AT4G04695

Predicted

Affinity Capture-MS

FSW = 0.0588

Unknown

CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G14000

Predicted

Synthetic Lethality

FSW = 0.0294

Unknown

UNKNOWN PROTEIN
AT4G14320Predicted

Affinity Capture-Western

FSW = 0.0334

Unknown

60S RIBOSOMAL PROTEIN L36A/L44 (RPL36AB)
AT4G20280

Predicted

Synthetic Rescue

FSW = 0.0488

Unknown

TAF11 (TBP-ASSOCIATED FACTOR 11) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION INITIATION FACTOR
AT4G27960

Predicted

Phenotypic Suppression

FSW = 0.0786

Unknown

UBC9 (UBIQUITIN CONJUGATING ENZYME 9) UBIQUITIN-PROTEIN LIGASE
AT5G04800

Predicted

Phenotypic Suppression

FSW = 0.0730

Unknown

40S RIBOSOMAL PROTEIN S17 (RPS17D)
AT5G11500

Predicted

two hybrid

FSW = 0.0267

Unknown

UNKNOWN PROTEIN
AT5G14060

Predicted

Phenotypic Enhancement

FSW = 0.1551

Unknown

CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE
AT4G37680

Predicted

Synthetic Lethality

FSW = 0.0352

Unknown

HHP4 (HEPTAHELICAL PROTEIN 4) RECEPTOR
AT5G18570

Predicted

two hybrid

FSW = 0.0216

Unknown

GTP1/OBG FAMILY PROTEIN
AT5G23290

Predicted

Affinity Capture-MS

FSW = 0.0045

Unknown

PDF5 (PREFOLDIN 5) UNFOLDED PROTEIN BINDING
AT5G26250

Predicted

Synthetic Lethality

FSW = 0.0518

Unknown

SUGAR TRANSPORTER PUTATIVE
AT5G39400

Predicted

Synthetic Lethality

FSW = 0.0381

Unknown

PTEN1 PHOSPHATASE
AT5G59490

Predicted

Affinity Capture-MS

FSW = 0.0275

Unknown

HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN
AT2G33060

Predicted

Gene fusion method

FSW = 0.0100

Unknown

ATRLP27 (RECEPTOR LIKE PROTEIN 27) KINASE/ PROTEIN BINDING

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Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454