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AT4G34430 - ( CHB3 DNA binding / transcription factor/ zinc ion binding )

146 Proteins interacs with AT4G34430

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT3G18165	Experimental	FSW = 0.0354	Class A: nucleus Class B: unclear Class D: nucleus (p = 0.78)	MOS4 (MODIFIER OF SNC14)
AT2G33610	Experimental two hybrid	FSW = 0.0507	Class A: nucleus Class D: plastid (p = 0.78) nucleus (p = 0.78)	ATSWI3B (SWITCH SUBUNIT 3) DNA BINDING
AT4G15900	Experimental	FSW = 0.0216	Class D: nucleus (p = 0.78)	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1) BASAL TRANSCRIPTION REPRESSOR/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT5G15090	Predicted Synthetic Lethality Affinity Capture-MS	FSW = 0.0369	Class C: nucleus	VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3) VOLTAGE-GATED ANION CHANNEL
AT4G24190	Predicted Affinity Capture-Western	FSW = 0.0346	Class C: nucleus	SHD (SHEPHERD) ATP BINDING / UNFOLDED PROTEIN BINDING
AT2G36530	Predicted two hybrid Affinity Capture-MS two hybrid two hybrid Affinity Capture-MS two hybrid Co-purification co-fractionation Co-fractionation	FSW = 0.1862	Class C: nucleus	LOS2 COPPER ION BINDING / PHOSPHOPYRUVATE HYDRATASE
AT1G76040	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.2757	Class C: nucleus	CPK29 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT5G64270	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Synthetic Lethality Affinity Capture-Western Synthetic Lethality Affinity Capture-MS	FSW = 0.0705	Class C: nucleus	SPLICING FACTOR PUTATIVE
AT1G73230	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1797	Class C: nucleus	NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX (NAC) DOMAIN-CONTAINING PROTEIN
AT3G17390	Predicted Affinity Capture-MS	FSW = 0.0265	Class C: nucleus	MTO3 (METHIONINE OVER-ACCUMULATOR 3) METHIONINE ADENOSYLTRANSFERASE
AT5G14170	Predicted far western blotting Affinity Capture-Western	FSW = 0.0184	Class C: nucleus	CHC1
AT5G41580	Predicted Phenotypic Enhancement	FSW = 0.0083	Class C: nucleus	ZINC ION BINDING
AT2G34450	Predicted Affinity Capture-MS	FSW = 0.0220	Class C: nucleus	HIGH MOBILITY GROUP (HMG1/2) FAMILY PROTEIN
AT5G03415	Predicted Phenotypic Enhancement	FSW = 0.0364	Class C: nucleus	DPB PROTEIN BINDING / PROTEIN HETERODIMERIZATION
AT3G52250	Predicted Affinity Capture-MS Affinity Capture-MS Co-purification Affinity Capture-MS	FSW = 0.1844	Class C: nucleus	DNA BINDING / TRANSCRIPTION FACTOR
AT3G17590	Predicted Co-purification two hybrid Affinity Capture-Western Co-purification	FSW = 0.0322	Class C: nucleus	BSH (BUSHY GROWTH) CHROMATIN BINDING / PROTEIN BINDING
AT5G19310	Predicted Co-purification far western blotting Reconstituted Complex	FSW = 0.0345	Class C: nucleus	HOMEOTIC GENE REGULATOR PUTATIVE
AT5G22220	Predicted Phenotypic Enhancement	FSW = 0.0113	Class C: nucleus	E2F1 DNA BINDING / PROTEIN BINDING / TRANSCRIPTION FACTOR
AT4G29390	Predicted Affinity Capture-MS	FSW = 0.0153	Class C: nucleus	40S RIBOSOMAL PROTEIN S30 (RPS30B)
AT5G27720	Predicted Affinity Capture-MS	FSW = 0.0557	Class C: nucleus	EMB1644 (EMBRYO DEFECTIVE 1644)
AT2G40290	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1325	Class C: nucleus	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 PUTATIVE / EIF-2A PUTATIVE / EIF-2-ALPHA PUTATIVE
AT4G36590	Predicted Affinity Capture-MS	FSW = 0.1762	Class C: nucleus	MADS-BOX PROTEIN (AGL40)
AT3G61890	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.0060	Class C: nucleus	ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12) TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR
AT5G02470	Predicted Phenotypic Enhancement	FSW = 0.0177	Class C: nucleus	DPA TRANSCRIPTION FACTOR
AT4G25340	Predicted Affinity Capture-MS	FSW = 0.0258	Class C: nucleus	IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT3G06010	Predicted Affinity Capture-Western Co-purification Affinity Capture-Western	FSW = 0.0196	Class C: nucleus	ATCHR12 ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT5G67500	Predicted Synthetic Lethality	FSW = 0.0120	Unknown	VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2) VOLTAGE-GATED ANION CHANNEL
AT5G63400	Predicted Affinity Capture-MS	FSW = 0.0101	Unknown	ADK1 (ADENYLATE KINASE 1) ATP BINDING / ADENYLATE KINASE/ NUCLEOBASE NUCLEOSIDE NUCLEOTIDE KINASE/ NUCLEOTIDE KINASE/ PHOSPHOTRANSFERASE PHOSPHATE GROUP AS ACCEPTOR
AT5G09590	Predicted Affinity Capture-MS	FSW = 0.0539	Unknown	MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT2G43160	Predicted two hybrid	FSW = 0.0199	Unknown	EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN
AT2G34480	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0791	Unknown	60S RIBOSOMAL PROTEIN L18A (RPL18AB)
AT1G31780	Predicted Affinity Capture-MS two hybrid Affinity Capture-MS two hybrid Co-purification co-fractionation Co-fractionation	FSW = 0.1158	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CONSERVED OLIGOMERIC COMPLEX COG6 (INTERPROIPR010490) HAS 281 BLAST HITS TO 279 PROTEINS IN 131 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 132 FUNGI - 106 PLANTS - 21 VIRUSES - 0 OTHER EUKARYOTES - 20 (SOURCE NCBI BLINK)
AT3G07680	Predicted Affinity Capture-MS	FSW = 0.0306	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT4G01320	Predicted Affinity Capture-MS	FSW = 0.0436	Unknown	ATSTE24 ENDOPEPTIDASE/ METALLOENDOPEPTIDASE
AT3G62870	Predicted Affinity Capture-MS Phenotypic Enhancement Affinity Capture-MS Synthetic Lethality	FSW = 0.0871	Unknown	60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT2G44350	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1954	Unknown	ATCS ATP BINDING / ATP CITRATE SYNTHASE/ CITRATE (SI)-SYNTHASE
AT3G56160	Predicted Affinity Capture-MS	FSW = 0.0520	Unknown	BILE ACIDSODIUM SYMPORTER
AT3G23940	Predicted Affinity Capture-MS synthetic growth defect Affinity Capture-MS Co-purification interologs mapping	FSW = 0.2212	Unknown	DEHYDRATASE FAMILY
AT5G53480	Predicted Synthetic Lethality	FSW = 0.0088	Unknown	IMPORTIN BETA-2 PUTATIVE
AT3G18790	Predicted Affinity Capture-MS	FSW = 0.0782	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CHLOROPLAST EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S ISY1-LIKE SPLICING (INTERPROIPR009360) HAS 1075 BLAST HITS TO 879 PROTEINS IN 176 SPECIES ARCHAE - 8 BACTERIA - 11 METAZOA - 379 FUNGI - 177 PLANTS - 27 VIRUSES - 9 OTHER EUKARYOTES - 464 (SOURCE NCBI BLINK)
AT5G25400	Predicted Affinity Capture-MS	FSW = 0.0766	Unknown	PHOSPHATE TRANSLOCATOR-RELATED
AT3G45780	Predicted Affinity Capture-MS	FSW = 0.0346	Unknown	PHOT1 (PHOTOTROPIN 1) FMN BINDING / BLUE LIGHT PHOTORECEPTOR/ KINASE/ PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE
AT3G55810	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0855	Unknown	PYRUVATE KINASE PUTATIVE
AT5G40370	Predicted Affinity Capture-MS	FSW = 0.0647	Unknown	GLUTAREDOXIN PUTATIVE
AT1G06390	Predicted Phenotypic Suppression	FSW = 0.0452	Unknown	GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1) GLYCOGEN SYNTHASE KINASE 3/ KINASE
AT4G04340	Predicted Affinity Capture-MS	FSW = 0.0411	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT3G21620	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0439	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT5G19990	Predicted Affinity Capture-MS	FSW = 0.0173	Unknown	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A) ATPASE
AT4G31860	Predicted Affinity Capture-MS	FSW = 0.0265	Unknown	PROTEIN PHOSPHATASE 2C PUTATIVE / PP2C PUTATIVE
AT1G77210	Predicted Affinity Capture-MS	FSW = 0.0782	Unknown	SUGAR TRANSPORTER PUTATIVE
AT5G19330	Predicted Phenotypic Suppression	FSW = 0.0072	Unknown	ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN / BTB/POZ DOMAIN-CONTAINING PROTEIN
AT2G47510	Predicted Affinity Capture-MS	FSW = 0.0145	Unknown	FUM1 (FUMARASE 1) CATALYTIC/ FUMARATE HYDRATASE
AT2G35120	Predicted Affinity Capture-Western	FSW = 0.0588	Unknown	GLYCINE CLEAVAGE SYSTEM H PROTEIN MITOCHONDRIAL PUTATIVE
AT3G10920	Predicted Affinity Capture-MS	FSW = 0.0118	Unknown	MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1) METAL ION BINDING / SUPEROXIDE DISMUTASE
AT5G02730	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1051	Unknown	ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT2G38960	Predicted two hybrid	FSW = 0.0274	Unknown	AERO2 (ARABIDOPSIS ENDOPLASMIC RETICULUM OXIDOREDUCTINS 2) FAD BINDING / ELECTRON CARRIER/ OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR / PROTEIN BINDING
AT5G47720	Predicted Affinity Capture-MS	FSW = 0.0340	Unknown	ACETYL-COA C-ACYLTRANSFERASE PUTATIVE / 3-KETOACYL-COA THIOLASE PUTATIVE
AT1G50110	Predicted interologs mapping Affinity Capture-Western Affinity Capture-MS	FSW = 0.0269	Unknown	BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE 6 / BRANCHED-CHAIN AMINO ACID TRANSAMINASE 6 (BCAT6)
AT2G17800	Predicted Affinity Capture-MS	FSW = 0.0233	Unknown	ARAC1 GTP BINDING
AT1G15960	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0670	Unknown	NRAMP6 INORGANIC ANION TRANSMEMBRANE TRANSPORTER/ METAL ION TRANSMEMBRANE TRANSPORTER
AT1G07780	Predicted interologs mapping interologs mapping Phenotypic Suppression	FSW = 0.0635	Unknown	PAI1 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 1) PHOSPHORIBOSYLANTHRANILATE ISOMERASE
AT4G10920	Predicted Affinity Capture-MS	FSW = 0.0377	Unknown	KELP DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION REGULATOR
AT1G19730	Predicted Affinity Capture-MS	FSW = 0.0229	Unknown	ATTRX4 OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR
AT2G31740	Predicted two hybrid two hybrid	FSW = 0.0153	Unknown	METHYLTRANSFERASE
AT1G14640	Predicted two hybrid	FSW = 0.0192	Unknown	SWAP (SUPPRESSOR-OF-WHITE-APRICOT)/SURP DOMAIN-CONTAINING PROTEIN
AT2G35320	Predicted two hybrid	FSW = 0.0118	Unknown	ATEYA (ARABIDOPSIS THALIANA EYES ABSENT HOMOLOG) PROTEIN TYROSINE PHOSPHATASE METAL-DEPENDENT
AT3G12280	Predicted Phenotypic Enhancement	FSW = 0.0103	Unknown	RBR1 (RETINOBLASTOMA-RELATED 1) TRANSCRIPTION FACTOR BINDING
AT4G10070	Predicted two hybrid	FSW = 0.0104	Unknown	KH DOMAIN-CONTAINING PROTEIN
AT5G49970	Predicted two hybrid Affinity Capture-MS	FSW = 0.0448	Unknown	ATPPOX (A THALIANA PYRIDOXIN (PYRODOXAMINE) 5-PHOSPHATE OXIDASE) PYRIDOXAMINE-PHOSPHATE OXIDASE
AT1G66740	Predicted Phenotypic Suppression	FSW = 0.0113	Unknown	SGA2
AT1G44120	Predicted Phenotypic Suppression	FSW = 0.0235	Unknown	C2 DOMAIN-CONTAINING PROTEIN / ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN
AT5G26751	Predicted Phenotypic Suppression	FSW = 0.0351	Unknown	ATSK11 PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G38110	Predicted Phenotypic Suppression	FSW = 0.0285	Unknown	ASF1B (ANTI- SILENCING FUNCTION 1B)
AT5G15020	Predicted Reconstituted Complex	FSW = 0.0219	Unknown	SNL2 (SIN3-LIKE 2)
AT5G63610	Predicted co-fractionation Co-fractionation	FSW = 0.0028	Unknown	CDKE1 (CYCLIN-DEPENDENT KINASE E1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G34540	Predicted Affinity Capture-Western	FSW = 0.0073	Unknown	ISOFLAVONE REDUCTASE FAMILY PROTEIN
AT1G05660	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS synthetic growth defect Affinity Capture-MS Dosage Growth Defect	FSW = 0.2233	Unknown	POLYGALACTURONASE PUTATIVE / PECTINASE PUTATIVE
AT1G08260	Predicted Affinity Capture-MS	FSW = 0.0197	Unknown	TIL1 (TILTED 1) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING / ZINC ION BINDING
AT1G25260	Predicted Affinity Capture-MS two hybrid two hybrid co-fractionation Co-fractionation Affinity Capture-MS	FSW = 0.1760	Unknown	ACIDIC RIBOSOMAL PROTEIN P0-RELATED
AT1G27320	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1506	Unknown	AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) CYTOKININ RECEPTOR/ OSMOSENSOR/ PROTEIN HISTIDINE KINASE
AT1G80510	Predicted Affinity Capture-MS	FSW = 0.0636	Unknown	AMINO ACID TRANSPORTER FAMILY PROTEIN
AT2G03040	Predicted Affinity Capture-MS	FSW = 0.0044	Unknown	TRANSMEMBRANE PROTEIN-RELATED
AT2G32765	Predicted Affinity Capture-MS	FSW = 0.0073	Unknown	SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5) PROTEIN TAG
AT2G34980	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1643	Unknown	SETH1 PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE/ TRANSFERASE
AT2G40010	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0254	Unknown	60S ACIDIC RIBOSOMAL PROTEIN P0 (RPP0A)
AT2G46070	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Co-purification co-fractionation Co-fractionation	FSW = 0.2404	Unknown	MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12) MAP KINASE/ KINASE
AT3G03340	Predicted Affinity Capture-MS	FSW = 0.0178	Unknown	UNE6 (UNFERTILIZED EMBRYO SAC 6)
AT3G18660	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS synthetic growth defect Affinity Capture-MS Dosage Growth Defect	FSW = 0.1912	Unknown	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT3G27580	Predicted Affinity Capture-MS two hybrid Affinity Capture-MS	FSW = 0.0696	Unknown	ATPK7 KINASE/ PROTEIN SERINE/THREONINE KINASE
AT3G45950	Predicted Synthetic Lethality	FSW = 0.0303	Unknown	SPLICING FACTOR-RELATED
AT3G62960	Predicted Affinity Capture-MS	FSW = 0.0483	Unknown	GLUTAREDOXIN FAMILY PROTEIN
AT4G33070	Predicted Affinity Capture-MS	FSW = 0.0250	Unknown	PYRUVATE DECARBOXYLASE PUTATIVE
AT1G02100	Predicted Affinity Capture-MS	FSW = 0.0798	Unknown	LEUCINE CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
AT1G07880	Predicted Affinity Capture-MS	FSW = 0.0315	Unknown	ATMPK13 MAP KINASE/ KINASE
AT1G09270	Predicted Affinity Capture-MS	FSW = 0.0370	Unknown	IMPA-4 (IMPORTIN ALPHA ISOFORM 4) BINDING / PROTEIN TRANSPORTER
AT1G25510	Predicted Affinity Capture-MS	FSW = 0.1354	Unknown	ASPARTYL PROTEASE FAMILY PROTEIN
AT1G26140	Predicted Affinity Capture-MS	FSW = 0.1399	Unknown	UNKNOWN PROTEIN
AT1G47830	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0431	Unknown	CLATHRIN COAT ASSEMBLY PROTEIN PUTATIVE
AT1G54560	Predicted biochemical	FSW = 0.0416	Unknown	XIE MOTOR/ PROTEIN BINDING
AT1G59580	Predicted Affinity Capture-MS	FSW = 0.0539	Unknown	ATMPK2 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2) MAP KINASE/ KINASE/ PROTEIN KINASE
AT1G63370	Predicted Affinity Capture-MS	FSW = 0.0168	Unknown	FLAVIN-CONTAINING MONOOXYGENASE FAMILY PROTEIN / FMO FAMILY PROTEIN
AT1G66810	Predicted Affinity Capture-MS	FSW = 0.0688	Unknown	ZINC FINGER (CCCH-TYPE) FAMILY PROTEIN
AT2G03160	Predicted Affinity Capture-MS	FSW = 0.0090	Unknown	ASK19 (ARABIDOPSIS SKP1-LIKE 19) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT2G14880	Predicted Affinity Capture-MS	FSW = 0.0324	Unknown	SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN
AT2G19220	Predicted Affinity Capture-MS	FSW = 0.0314	Unknown	UNKNOWN PROTEIN
AT2G28720	Predicted Affinity Capture-MS	FSW = 0.0992	Unknown	HISTONE H2B PUTATIVE
AT2G31020	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0375	Unknown	ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A) OXYSTEROL BINDING
AT2G34180	Predicted Affinity Capture-MS	FSW = 0.0447	Unknown	CIPK13 (CBL-INTERACTING PROTEIN KINASE 13) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT2G35390	Predicted Affinity Capture-MS	FSW = 0.0721	Unknown	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1 / PHOSPHORIBOSYL DIPHOSPHATE SYNTHETASE 1 (PRSI)
AT2G36060	Predicted Affinity Capture-MS	FSW = 0.0283	Unknown	UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN
AT2G38490	Predicted Affinity Capture-MS	FSW = 0.0318	Unknown	CIPK22 (CBL-INTERACTING PROTEIN KINASE 22) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT2G47090	Predicted Affinity Capture-MS	FSW = 0.0534	Unknown	NUCLEIC ACID BINDING / PROTEIN BINDING / ZINC ION BINDING
AT3G01100	Predicted Affinity Capture-MS	FSW = 0.0439	Unknown	HYP1 (HYPOTHETICAL PROTEIN 1)
AT3G09640	Predicted Affinity Capture-MS	FSW = 0.0307	Unknown	APX2 (ASCORBATE PEROXIDASE 2) L-ASCORBATE PEROXIDASE
AT3G09800	Predicted Affinity Capture-MS	FSW = 0.0205	Unknown	PROTEIN BINDING
AT3G11230	Predicted Affinity Capture-MS	FSW = 0.0628	Unknown	YIPPEE FAMILY PROTEIN
AT3G13060	Predicted Affinity Capture-MS	FSW = 0.0577	Unknown	ECT5 FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S YT521-B-LIKE PROTEIN (INTERPROIPR007275) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS ECT2 PROTEIN BINDING (TAIRAT3G134601) HAS 1007 BLAST HITS TO 965 PROTEINS IN 147 SPECIES ARCHAE - 0 BACTERIA - 8 METAZOA - 528 FUNGI - 103 PLANTS - 235 VIRUSES - 0 OTHER EUKARYOTES - 133 (SOURCE NCBI BLINK)
AT3G14090	Predicted Synthetic Lethality	FSW = 0.0086	Unknown	ATEXO70D3 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN D3) PROTEIN BINDING
AT3G19190	Predicted Affinity Capture-MS	FSW = 0.0218	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S ATG2 C-TERMINAL (INTERPROIPR015412) HAS 603 BLAST HITS TO 514 PROTEINS IN 156 SPECIES ARCHAE - 0 BACTERIA - 19 METAZOA - 326 FUNGI - 168 PLANTS - 38 VIRUSES - 0 OTHER EUKARYOTES - 52 (SOURCE NCBI BLINK)
AT3G50780	Predicted Affinity Capture-MS	FSW = 0.0233	Unknown	INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS PRLI-INTERACTING FACTOR-RELATED (TAIRAT1G638501) HAS 173 BLAST HITS TO 173 PROTEINS IN 14 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 8 FUNGI - 0 PLANTS - 164 VIRUSES - 0 OTHER EUKARYOTES - 1 (SOURCE NCBI BLINK)
AT4G04695	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0773	Unknown	CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G04700	Predicted Affinity Capture-MS	FSW = 0.0659	Unknown	CPK27 ATP BINDING / CALCIUM ION BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G04885	Predicted Affinity Capture-MS	FSW = 0.0118	Unknown	PCFS4 (PCF11P-SIMILAR PROTEIN 4) ZINC ION BINDING
AT4G21490	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0630	Unknown	NDB3 NADH DEHYDROGENASE
AT4G34880	Predicted Affinity Capture-Western Reconstituted Complex Synthetic Lethality Affinity Capture-MS	FSW = 0.0252	Unknown	AMIDASE FAMILY PROTEIN
AT5G01640	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.2853	Unknown	PRA1B5 (PRENYLATED RAB ACCEPTOR 1B5)
AT5G07070	Predicted Affinity Capture-MS	FSW = 0.0362	Unknown	CIPK2 (CBL-INTERACTING PROTEIN KINASE 2) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G13010	Predicted Affinity Capture-MS interologs mapping Affinity Capture-MS synthetic growth defect	FSW = 0.2661	Unknown	EMB3011 (EMBRYO DEFECTIVE 3011) ATP BINDING / RNA HELICASE/ HELICASE/ NUCLEIC ACID BINDING
AT5G13400	Predicted Affinity Capture-MS	FSW = 0.0140	Unknown	PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN
AT5G13700	Predicted Affinity Capture-Western	FSW = 0.1098	Unknown	ATPAO1 (ARABIDOPSIS THALIANA POLYAMINE OXIDASE 1) FAD BINDING / POLYAMINE OXIDASE
AT5G17860	Predicted Affinity Capture-MS	FSW = 0.0426	Unknown	CAX7 (CALCIUM EXCHANGER 7) CALCIUMSODIUM ANTIPORTER/ CATIONCATION ANTIPORTER
AT5G25030	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Co-purification co-fractionation Co-fractionation	FSW = 0.2593	Unknown	ATP BINDING / NUCLEOTIDE BINDING / PHENYLALANINE-TRNA LIGASE
AT5G26250	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western	FSW = 0.1956	Unknown	SUGAR TRANSPORTER PUTATIVE
AT5G37830	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Co-purification interologs mapping Affinity Capture-MS Co-purification synthetic growth defect	FSW = 0.2920	Unknown	OXP1 (OXOPROLINASE 1) 5-OXOPROLINASE (ATP-HYDROLYZING)/ HYDROLASE
AT5G44830	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1923	Unknown	GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN
AT5G46280	Predicted Affinity Capture-MS	FSW = 0.0044	Unknown	DNA REPLICATION LICENSING FACTOR PUTATIVE
AT5G54800	Predicted Affinity Capture-MS	FSW = 0.0455	Unknown	GPT1 ANTIPORTER/ GLUCOSE-6-PHOSPHATE TRANSMEMBRANE TRANSPORTER
AT5G59850	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS two hybrid Affinity Capture-MS	FSW = 0.2268	Unknown	40S RIBOSOMAL PROTEIN S15A (RPS15AF)
AT5G67290	Predicted Synthetic Rescue Phenotypic Suppression	FSW = 0.0329	Unknown	FAD-DEPENDENT OXIDOREDUCTASE FAMILY PROTEIN
AT4G37680	Predicted Affinity Capture-MS	FSW = 0.0696	Unknown	HHP4 (HEPTAHELICAL PROTEIN 4) RECEPTOR
AT5G01320	Predicted Affinity Capture-MS	FSW = 0.0227	Unknown	PYRUVATE DECARBOXYLASE PUTATIVE
AT5G01390	Predicted Affinity Capture-MS	FSW = 0.0171	Unknown	DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT5G10830	Predicted Affinity Capture-MS	FSW = 0.0092	Unknown	EMBRYO-ABUNDANT PROTEIN-RELATED
AT5G19510	Predicted Affinity Capture-MS	FSW = 0.0658	Unknown	ELONGATION FACTOR 1B ALPHA-SUBUNIT 2 (EEF1BALPHA2)
AT5G59040	Predicted Affinity Capture-MS	FSW = 0.0409	Unknown	COPT3 COPPER ION TRANSMEMBRANE TRANSPORTER/ HIGH AFFINITY COPPER ION TRANSMEMBRANE TRANSPORTER
AT2G15080	Predicted Gene fusion method	FSW = 0.0068	Unknown	ATRLP19 (RECEPTOR LIKE PROTEIN 19) KINASE/ PROTEIN BINDING

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT4G34430 - ( CHB3 DNA binding / transcription factor/ zinc ion binding )

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