Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT4G36750 - ( quinone reductase family protein )

47 Proteins interacs with AT4G36750
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT4G27090

Predicted

Synthetic Lethality

FSW = 0.1787

Class C:

vacuole

plasma membrane

60S RIBOSOMAL PROTEIN L14 (RPL14B)
AT3G08710

Predicted

two hybrid

FSW = 0.0608

Class C:

vacuole

plasma membrane

ATH9 (THIOREDOXIN H-TYPE 9)
AT3G47520

Predicted

Phenotypic Enhancement

FSW = 0.1364

Class C:

vacuole

MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT1G65240

Predicted

Reconstituted Complex

FSW = 0.1421

Class C:

plasma membrane

ASPARTYL PROTEASE FAMILY PROTEIN
AT2G42590

Predicted

two hybrid

FSW = 0.1079

Class C:

plasma membrane

GRF9 (GENERAL REGULATORY FACTOR 9) CALCIUM ION BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G71860

Predicted

Synthetic Lethality

FSW = 0.0255

Class C:

plasma membrane

PTP1 (PROTEIN TYROSINE PHOSPHATASE 1) PROTEIN TYROSINE PHOSPHATASE
AT5G02490

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

two hybrid

FSW = 0.0781

Class C:

plasma membrane

HEAT SHOCK COGNATE 70 KDA PROTEIN 2 (HSC70-2) (HSP70-2)
AT3G07100

Predicted

two hybrid

FSW = 0.0911

Unknown

PROTEIN TRANSPORT PROTEIN SEC24 PUTATIVE
AT1G11320

Predicted

two hybrid

Affinity Capture-MS

FSW = 0.1039

Unknown

UNKNOWN PROTEIN
AT3G45770

Predicted

two hybrid

FSW = 0.1414

Unknown

OXIDOREDUCTASE ZINC-BINDING DEHYDROGENASE FAMILY PROTEIN
AT2G44350

Predicted

Affinity Capture-MS

FSW = 0.0212

Unknown

ATCS ATP BINDING / ATP CITRATE SYNTHASE/ CITRATE (SI)-SYNTHASE
AT5G43840

Predicted

two hybrid

FSW = 0.1988

Unknown

AT-HSFA6A DNA BINDING / TRANSCRIPTION FACTOR
AT3G13445

Predicted

Phenotypic Enhancement

FSW = 0.0731

Unknown

TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT1G21190

Predicted

two hybrid

FSW = 0.0468

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT2G41380

Predicted

Synthetic Lethality

FSW = 0.0282

Unknown

EMBRYO-ABUNDANT PROTEIN-RELATED
AT1G10060

Predicted

two hybrid

FSW = 0.1764

Unknown

BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE 1 / BRANCHED-CHAIN AMINO ACID TRANSAMINASE 1 (BCAT1)
AT4G33730

Predicted

Phenotypic Enhancement

FSW = 0.2199

Unknown

PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT3G54840

Predicted

two hybrid

FSW = 0.0458

Unknown

ARA6 GTP BINDING / GTPASE
AT1G01020

Predicted

Affinity Capture-Western

Co-purification

FSW = 0.1116

Unknown

ARV1
AT2G43460

Predicted

Reconstituted Complex

Synthetic Rescue

FSW = 0.1063

Unknown

60S RIBOSOMAL PROTEIN L38 (RPL38A)
AT1G19730

Predicted

Affinity Capture-MS

FSW = 0.0181

Unknown

ATTRX4 OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR
AT4G17190

Predicted

Affinity Capture-MS

FSW = 0.0277

Unknown

FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT1G02630

Predicted

Affinity Capture-MS

Affinity Capture-MS

co-fractionation

Co-fractionation

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

co-fractionation

Co-fractionation

FSW = 0.1758

Unknown

EQUILIBRATIVE NUCLEOSIDE TRANSPORTER PUTATIVE (ENT8)
AT1G07880

Predicted

two hybrid

FSW = 0.0557

Unknown

ATMPK13 MAP KINASE/ KINASE
AT1G08260

Predicted

Reconstituted Complex

FSW = 0.1091

Unknown

TIL1 (TILTED 1) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING / ZINC ION BINDING
AT1G49520

Predicted

Phenotypic Enhancement

FSW = 0.1473

Unknown

SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN
AT1G55810

Predicted

two hybrid

FSW = 0.0602

Unknown

URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE
AT1G71530

Predicted

two hybrid

FSW = 0.2381

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT1G76920

Predicted

Phenotypic Enhancement

FSW = 0.1154

Unknown

F-BOX FAMILY PROTEIN (FBX3)
AT1G79730

Predicted

two hybrid

FSW = 0.0092

Unknown

ELF7 (EARLY FLOWERING 7)
AT2G01070

Predicted

Reconstituted Complex

Affinity Capture-Western

Co-purification

FSW = 0.2090

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM INTEGRAL TO MEMBRANE EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G724801) HAS 500 BLAST HITS TO 499 PROTEINS IN 125 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 271 FUNGI - 99 PLANTS - 97 VIRUSES - 0 OTHER EUKARYOTES - 33 (SOURCE NCBI BLINK)
AT2G01830

Predicted

Phenotypic Enhancement

FSW = 0.0414

Unknown

WOL (WOODEN LEG) CYTOKININ RECEPTOR/ OSMOSENSOR/ PHOSPHOPROTEIN PHOSPHATASE/ PROTEIN HISTIDINE KINASE
AT2G16740

Predicted

Affinity Capture-MS

FSW = 0.0070

Unknown

UBC29 (UBIQUITIN-CONJUGATING ENZYME 29) UBIQUITIN-PROTEIN LIGASE
AT2G23070

Predicted

Phenotypic Enhancement

FSW = 0.0800

Unknown

CASEIN KINASE II ALPHA CHAIN PUTATIVE
AT2G32765

Predicted

Phenotypic Enhancement

FSW = 0.2001

Unknown

SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5) PROTEIN TAG
AT2G35390

Predicted

Affinity Capture-MS

FSW = 0.0210

Unknown

RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1 / PHOSPHORIBOSYL DIPHOSPHATE SYNTHETASE 1 (PRSI)
AT3G05960

Predicted

Phenotypic Enhancement

FSW = 0.0667

Unknown

STP6 (SUGAR TRANSPORTER 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G17520

Predicted

Affinity Capture-MS

Affinity Capture-MS

two hybrid

Affinity Capture-Western

Affinity Capture-MS

FSW = 0.3784

Unknown

LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN
AT4G24040

Predicted

Phenotypic Enhancement

FSW = 0.2268

Unknown

TRE1 (TREHALASE 1) ALPHAALPHA-TREHALASE/ TREHALASE
AT4G33950

Predicted

Phenotypic Enhancement

FSW = 0.1000

Unknown

OST1 (OPEN STOMATA 1) CALCIUM-DEPENDENT PROTEIN SERINE/THREONINE KINASE/ KINASE/ PROTEIN KINASE
AT1G13640

Predicted

Phenotypic Suppression

FSW = 0.0291

Unknown

PHOSPHATIDYLINOSITOL 3- AND 4-KINASE FAMILY PROTEIN
AT3G05040

Predicted

two hybrid

FSW = 0.2930

Unknown

HST (HASTY) NUCLEOCYTOPLASMIC TRANSPORTER
AT3G12490

Predicted

interologs mapping

FSW = 0.0308

Unknown

CYSTEINE PROTEASE INHIBITOR PUTATIVE / CYSTATIN PUTATIVE
AT5G11570

Predicted

Reconstituted Complex

FSW = 0.3000

Unknown

PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN
AT5G38110

Predicted

two hybrid

FSW = 0.1759

Unknown

ASF1B (ANTI- SILENCING FUNCTION 1B)
AT5G38290

Predicted

two hybrid

FSW = 0.1188

Unknown

PEPTIDYL-TRNA HYDROLASE FAMILY PROTEIN
AT5G52210

Predicted

two hybrid

FSW = 0.0651

Unknown

ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1) GTP BINDING

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454