Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT5G19150 - ( carbohydrate kinase family )

96 Proteins interacs with AT5G19150
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G01280

Predicted

Affinity Capture-MS

FSW = 0.1186

Unknown

VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1) VOLTAGE-GATED ANION CHANNEL
AT4G32470

Predicted

Affinity Capture-MS

FSW = 0.2007

Unknown

UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE
AT2G01250

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2268

Unknown

60S RIBOSOMAL PROTEIN L7 (RPL7B)
AT2G20450

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2338

Unknown

60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT1G01100

Predicted

Affinity Capture-MS

FSW = 0.0157

Unknown

60S ACIDIC RIBOSOMAL PROTEIN P1 (RPP1A)
AT1G22780

Predicted

Affinity Capture-MS

FSW = 0.1323

Unknown

PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT5G24780

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4527

Unknown

VSP1 (VEGETATIVE STORAGE PROTEIN 1) ACID PHOSPHATASE/ TRANSCRIPTION FACTOR BINDING
AT2G29990

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4394

Unknown

NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2) FAD BINDING / NADH DEHYDROGENASE/ OXIDOREDUCTASE
AT3G14420

Predicted

Affinity Capture-MS

FSW = 0.0251

Unknown

(S)-2-HYDROXY-ACID OXIDASE PEROXISOMAL PUTATIVE / GLYCOLATE OXIDASE PUTATIVE / SHORT CHAIN ALPHA-HYDROXY ACID OXIDASE PUTATIVE
AT2G39290

Predicted

Affinity Capture-MS

FSW = 0.0880

Unknown

PGP1 (PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 1) CDP-ALCOHOL PHOSPHATIDYLTRANSFERASE/ CDP-DIACYLGLYCEROL-GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE
AT2G31170

Predicted

Affinity Capture-MS

FSW = 0.1763

Unknown

SYCO ARATH ATP BINDING / AMINOACYL-TRNA LIGASE/ CYSTEINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT2G19870

Predicted

pull down

FSW = 0.0081

Unknown

TRNA/RRNA METHYLTRANSFERASE (SPOU) FAMILY PROTEIN
AT4G23430

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.3667

Unknown

SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN
AT5G60390

Predicted

Affinity Capture-MS

FSW = 0.1564

Unknown

ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT1G27970

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.3441

Unknown

NTF2B (NUCLEAR TRANSPORT FACTOR 2B) RAN GTPASE BINDING / PROTEIN TRANSPORTER
AT2G21540

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4588

Unknown

SFH3 (SEC14-LIKE 3) PHOSPHATIDYLINOSITOL TRANSPORTER
AT3G13560

Predicted

Affinity Capture-MS

FSW = 0.0265

Unknown

GLYCOSYL HYDROLASE FAMILY 17 PROTEIN
AT5G52640

Predicted

synthetic growth defect

FSW = 0.0062

Unknown

ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT1G50310

Predicted

Affinity Capture-MS

FSW = 0.1495

Unknown

STP9 (SUGAR TRANSPORTER 9) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT5G17760

Predicted

two hybrid

interologs mapping

FSW = 0.0231

Unknown

AAA-TYPE ATPASE FAMILY PROTEIN
AT2G44690

Predicted

Synthetic Lethality

FSW = 0.0100

Unknown

ARAC9 GTP BINDING
AT5G12480

Predicted

biochemical

FSW = 0.0036

Unknown

CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G22120

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.4060

Unknown

EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT1G70490Predicted

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.2141

Unknown

ARFA1D GTP BINDING / PHOSPHOLIPASE ACTIVATOR/ PROTEIN BINDING
AT4G36860

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.1978

Unknown

ZINC ION BINDING
AT3G21700

Predicted

Affinity Capture-MS

FSW = 0.0081

Unknown

SGP2 GTP BINDING
AT2G47640

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.1930

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN D2 PUTATIVE / SNRNP CORE PROTEIN D2 PUTATIVE / SM PROTEIN D2 PUTATIVE
AT1G08370

Predicted

two hybrid

FSW = 0.0108

Unknown

DCP1 (DECAPPING 1) M7G(5)PPPN DIPHOSPHATASE/ PROTEIN HOMODIMERIZATION
AT4G29390Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0785

Unknown

40S RIBOSOMAL PROTEIN S30 (RPS30B)
AT5G44500

Predicted

Affinity Capture-MS

FSW = 0.2107

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT2G37470

Predicted

Affinity Capture-MS

FSW = 0.1492

Unknown

HISTONE H2B PUTATIVE
AT1G15870

Predicted

Affinity Capture-MS

FSW = 0.0056

Unknown

MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN / MAM33 FAMILY PROTEIN
AT1G19140

Predicted

biochemical

FSW = 0.0360

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN UBIQUINONE BIOSYNTHETIC PROCESS LOCATED IN MITOCHONDRION EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S COQ9 (INTERPROIPR013718) UBIQUINONE BIOSYNTHESIS PROTEIN COQ9 (INTERPROIPR012762) HAS 598 BLAST HITS TO 598 PROTEINS IN 175 SPECIES ARCHAE - 0 BACTERIA - 149 METAZOA - 114 FUNGI - 60 PLANTS - 22 VIRUSES - 0 OTHER EUKARYOTES - 253 (SOURCE NCBI BLINK)
AT5G02050

Predicted

Affinity Capture-MS

FSW = 0.0044

Unknown

MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN / MAM33 FAMILY PROTEIN
AT3G10920

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4266

Unknown

MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1) METAL ION BINDING / SUPEROXIDE DISMUTASE
AT5G57625

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4491

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT4G33710

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2838

Unknown

PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT1G76400

Predicted

Affinity Capture-MS

FSW = 0.0319

Unknown

RIBOPHORIN I FAMILY PROTEIN
AT3G08730

Predicted

Affinity Capture-MS

FSW = 0.2464

Unknown

PK1 (PROTEIN-SERINE KINASE 1) KINASE/ PROTEIN BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT3G16050

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4531

Unknown

A37 PROTEIN HETERODIMERIZATION
AT1G52300

Predicted

Affinity Capture-MS

FSW = 0.0108

Unknown

60S RIBOSOMAL PROTEIN L37 (RPL37B)
AT2G24040

Predicted

Affinity Capture-MS

FSW = 0.1480

Unknown

HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT1G24706

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.3362

Unknown

UNKNOWN PROTEIN
AT1G31170

Predicted

Co-purification

FSW = 0.0234

Unknown

SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS
AT1G58520

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4241

Unknown

HYDROLASE ACTING ON ESTER BONDS / LIPASE
AT1G59730

Predicted

Affinity Capture-MS

FSW = 0.0610

Unknown

ATH7 (THIOREDOXIN H-TYPE 7)
AT1G63660

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2150

Unknown

GMP SYNTHASE (GLUTAMINE-HYDROLYZING) PUTATIVE / GLUTAMINE AMIDOTRANSFERASE PUTATIVE
AT1G74810

Predicted

Reconstituted Complex

Affinity Capture-Western

FSW = 0.0129

Unknown

BOR5 ANION EXCHANGER
AT2G01770

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4660

Unknown

VIT1 (VACUOLAR IRON TRANSPORTER 1) IRON ION TRANSMEMBRANE TRANSPORTER
AT2G03040

Predicted

Affinity Capture-MS

FSW = 0.1221

Unknown

TRANSMEMBRANE PROTEIN-RELATED
AT2G03410

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2846

Unknown

MO25 FAMILY PROTEIN
AT2G15790

Predicted

Synthetic Rescue

FSW = 0.0069

Unknown

SQN (SQUINT) PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT2G16740

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.1564

Unknown

UBC29 (UBIQUITIN-CONJUGATING ENZYME 29) UBIQUITIN-PROTEIN LIGASE
AT2G19910

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4111

Unknown

RNA-DEPENDENT RNA POLYMERASE FAMILY PROTEIN
AT2G37760

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2977

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT2G41530

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4422

Unknown

SFGH (S-FORMYLGLUTATHIONE HYDROLASE) S-FORMYLGLUTATHIONE HYDROLASE/ HYDROLASE ACTING ON ESTER BONDS
AT2G42160

Predicted

Affinity Capture-MS

FSW = 0.1428

Unknown

ZINC FINGER (UBIQUITIN-HYDROLASE) DOMAIN-CONTAINING PROTEIN
AT2G43360

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

interologs mapping

FSW = 0.5567

Unknown

BIO2 (BIOTIN AUXOTROPH 2) BIOTIN SYNTHASE
AT2G45080

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2817

Unknown

CYCP31 (CYCLIN P31) CYCLIN-DEPENDENT PROTEIN KINASE
AT2G46860

Predicted

Phenotypic Enhancement

Affinity Capture-MS

FSW = 0.3547

Unknown

ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT3G11230

Predicted

Affinity Capture-MS

FSW = 0.0041

Unknown

YIPPEE FAMILY PROTEIN
AT3G11900

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-MS

FSW = 0.4171

Unknown

ANT1 (AROMATIC AND NEUTRAL TRANSPORTER 1) AMINO ACID TRANSMEMBRANE TRANSPORTER/ AROMATIC AMINO ACID TRANSMEMBRANE TRANSPORTER/ NEUTRAL AMINO ACID TRANSMEMBRANE TRANSPORTER
AT3G18850

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.3114

Unknown

LPAT5 ACYLTRANSFERASE
AT3G19940

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.1304

Unknown

SUGAR TRANSPORTER PUTATIVE
AT3G27110

Predicted

Affinity Capture-MS

FSW = 0.0251

Unknown

PEPTIDASE M48 FAMILY PROTEIN
AT3G30842

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2616

Unknown

PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT3G49880

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Reconstituted Complex

FSW = 0.4312

Unknown

GLYCOSYL HYDROLASE FAMILY PROTEIN 43
AT3G51880

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4006

Unknown

HMGB1 (HIGH MOBILITY GROUP B 1) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT3G52560

Predicted

Affinity Capture-MS

FSW = 0.1413

Unknown

UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT3G53730

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4390

Unknown

HISTONE H4
AT3G59410

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4429

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT4G20280

Predicted

Affinity Capture-Western

Reconstituted Complex

Affinity Capture-MS

FSW = 0.0393

Unknown

TAF11 (TBP-ASSOCIATED FACTOR 11) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION INITIATION FACTOR
AT4G25860

Predicted

Affinity Capture-MS

FSW = 0.2860

Unknown

ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A) OXYSTEROL BINDING
AT4G35620

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.4225

Unknown

CYCB22 (CYCLIN B22) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT5G01430

Predicted

Affinity Capture-MS

FSW = 0.0217

Unknown

GOT1-LIKE FAMILY PROTEIN
AT5G06600

Predicted

Affinity Capture-MS

FSW = 0.0134

Unknown

UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12) UBIQUITIN THIOLESTERASE/ UBIQUITIN-SPECIFIC PROTEASE
AT5G09630

Predicted

Affinity Capture-MS

FSW = 0.1451

Unknown

PROTEIN BINDING / ZINC ION BINDING
AT5G15070

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0274

Unknown

ACID PHOSPHATASE/ OXIDOREDUCTASE/ TRANSITION METAL ION BINDING
AT5G16040

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0087

Unknown

REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN
AT5G17000

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.1901

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT1G02100

Predicted

Affinity Capture-MS

FSW = 0.0039

Unknown

LEUCINE CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
AT1G20696

Predicted

Affinity Capture-MS

FSW = 0.1678

Unknown

HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G34580

Predicted

Affinity Capture-MS

FSW = 0.1214

Unknown

MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G78290

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.3359

Unknown

SERINE/THREONINE PROTEIN KINASE PUTATIVE
AT2G02000

Predicted

Phenotypic Enhancement

FSW = 0.0162

Unknown

GAD3 (GLUTAMATE DECARBOXYLASE 3) CALMODULIN BINDING
AT2G27340

Predicted

Affinity Capture-MS

FSW = 0.0945

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN CONTAINS INTERPRO DOMAIN/S N-ACETYLGLUCOSAMINYL PHOSPHATIDYLINOSITOL DEACETYLASE (INTERPROIPR003737) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED (TAIRAT3G581302) HAS 325 BLAST HITS TO 323 PROTEINS IN 156 SPECIES ARCHAE - 0 BACTERIA - 42 METAZOA - 92 FUNGI - 108 PLANTS - 28 VIRUSES - 0 OTHER EUKARYOTES - 55 (SOURCE NCBI BLINK)
AT2G44150

Predicted

Synthetic Lethality

FSW = 0.0031

Unknown

ASHH3 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3) HISTONE-LYSINE N-METHYLTRANSFERASE
AT2G47570

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.3285

Unknown

60S RIBOSOMAL PROTEIN L18 (RPL18A)
AT4G19645

Predicted

Affinity Capture-MS

FSW = 0.3043

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN INTEGRAL TO MEMBRANE CONTAINS INTERPRO DOMAIN/S TRAM LAG1 AND CLN8 HOMOLOGY (INTERPROIPR006634) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G313002) HAS 401 BLAST HITS TO 401 PROTEINS IN 98 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 186 FUNGI - 102 PLANTS - 84 VIRUSES - 0 OTHER EUKARYOTES - 29 (SOURCE NCBI BLINK)
AT5G13860

Predicted

Affinity Capture-MS

FSW = 0.0287

Unknown

ELC-LIKE (ELCH-LIKE) SMALL CONJUGATING PROTEIN LIGASE
AT5G16170

Predicted

synthetic growth defect

FSW = 0.0142

Unknown

UNKNOWN PROTEIN
AT5G23290

Predicted

Affinity Capture-Western

FSW = 0.0100

Unknown

PDF5 (PREFOLDIN 5) UNFOLDED PROTEIN BINDING
AT5G27640

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.4504

Unknown

TIF3B1 (TRANSLATION INITIATION FACTOR 3B1) NUCLEIC ACID BINDING / TRANSLATION INITIATION FACTOR
AT5G19820

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.3038

Unknown

EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT5G20060

Predicted

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.4037

Unknown

PHOSPHOLIPASE/CARBOXYLESTERASE FAMILY PROTEIN
AT5G57890

Predicted

Affinity Capture-MS

FSW = 0.3161

Unknown

ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE

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Fasta sequences:

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454