Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT5G19360 - ( CPK34 ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase )

42 Proteins interacs with AT5G19360
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT5G63400

Predicted

two hybrid

FSW = 0.0111

Unknown

ADK1 (ADENYLATE KINASE 1) ATP BINDING / ADENYLATE KINASE/ NUCLEOBASE NUCLEOSIDE NUCLEOTIDE KINASE/ NUCLEOTIDE KINASE/ PHOSPHOTRANSFERASE PHOSPHATE GROUP AS ACCEPTOR
AT3G49010

Predicted

Affinity Capture-MS

FSW = 0.0142

Unknown

ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1) STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G19640

Predicted

Affinity Capture-MS

FSW = 0.0157

Unknown

ARA7 GTP BINDING
AT2G37270

Predicted

Affinity Capture-MS

FSW = 0.0204

Unknown

ATRPS5B (RIBOSOMAL PROTEIN 5B) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G51850

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.6194

Unknown

CPK13 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G62870

Predicted

two hybrid

FSW = 0.0206

Unknown

60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT3G54670

Predicted

Phenotypic Enhancement

FSW = 0.0134

Unknown

TTN8 (TITAN8) ATP BINDING / TRANSPORTER
AT4G23650

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.5625

Unknown

CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G35670

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.3968

Unknown

ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2) CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE
AT3G17390

Predicted

two hybrid

FSW = 0.0453

Unknown

MTO3 (METHIONINE OVER-ACCUMULATOR 3) METHIONINE ADENOSYLTRANSFERASE
AT1G74740

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.5404

Unknown

CPK30 (CALCIUM-DEPENDENT PROTEIN KINASE 30) CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE
AT1G61950

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.5772

Unknown

CPK19 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G04720

Predicted

Phylogenetic profile method

FSW = 0.2576

Unknown

CPK21 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G66210

Predicted

Gene fusion method

Phylogenetic profile method

Co-expression

FSW = 0.6475

Unknown

CPK28 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G03540

Predicted

Phenotypic Suppression

FSW = 0.0401

Unknown

ATEXO70A1 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN A1) PROTEIN BINDING
AT2G17890

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.6194

Unknown

CPK16 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G19450

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.4672

Unknown

CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT3G57530

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.4535

Unknown

CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32) CALCIUM-DEPENDENT PROTEIN KINASE C/ CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING
AT5G12480

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.2336

Unknown

CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G09570

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.3097

Unknown

CPK4 CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE
AT3G33520

Predicted

Affinity Capture-MS

FSW = 0.0137

Unknown

ATARP6 STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT1G04510

Predicted

Gene fusion method

FSW = 0.0208

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G14580

Predicted

Affinity Capture-MS

FSW = 0.0182

Unknown

ATPRB1
AT4G11330

Predicted

two hybrid

FSW = 0.0080

Unknown

ATMPK5 (MAP KINASE 5) MAP KINASE/ KINASE
AT5G19350

Predicted

two hybrid

FSW = 0.0412

Unknown

RNA-BINDING PROTEIN 45 (RBP45) PUTATIVE
AT5G21274

Predicted

in vitro

in vitro

two hybrid

in vitro

FSW = 0.0087

Unknown

CAM6 (CALMODULIN 6) CALCIUM ION BINDING
AT3G57550

Predicted

Affinity Capture-Western

biochemical

FSW = 0.0083

Unknown

AGK2 (GUANYLATE KINASE) GUANYLATE KINASE
AT5G04850

Predicted

Affinity Capture-MS

FSW = 0.1135

Unknown

VPS602
AT2G29680

Predicted

in vitro

in vivo

FSW = 0.0070

Unknown

CDC6 (CELL DIVISION CONTROL 6)
AT5G60550

Predicted

in vitro

in vivo

in vitro

in vivo

FSW = 0.0087

Unknown

GRIK2 (GEMINIVIRUS REP INTERACTING KINASE 2) KINASE
AT1G31170

Predicted

Affinity Capture-MS

FSW = 0.0136

Unknown

SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS
AT1G68200

Predicted

Affinity Capture-MS

FSW = 0.0280

Unknown

ZINC FINGER (CCCH-TYPE) FAMILY PROTEIN
AT2G03040

Predicted

Affinity Capture-MS

FSW = 0.0142

Unknown

TRANSMEMBRANE PROTEIN-RELATED
AT5G53120

Predicted

Phenotypic Suppression

FSW = 0.0167

Unknown

SPDS3 (SPERMIDINE SYNTHASE 3) SPERMIDINE SYNTHASE/ SPERMINE SYNTHASE
AT5G61010

Predicted

Affinity Capture-MS

FSW = 0.0272

Unknown

ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2) PROTEIN BINDING
AT2G41860

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.5829

Unknown

CPK14 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G23580

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.6264

Unknown

CDPK9 (CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G50700

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.5906

Unknown

CPK33 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G12180

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.6349

Unknown

CPK17 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G36070

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.3995

Unknown

CPK18 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G04700

Predicted

Phylogenetic profile method

FSW = 0.2357

Unknown

CPK27 ATP BINDING / CALCIUM ION BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G04695

Predicted

Phylogenetic profile method

FSW = 0.2364

Unknown

CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454