Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT5G54200 - ( WD-40 repeat family protein )
100 Proteins interacs with AT5G54200Locus | Method | FSW | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT4G32470 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3195
| Unknown | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE |
AT3G49910 | PredictedAffinity Capture-MS | FSW = 0.1883
| Unknown | 60S RIBOSOMAL PROTEIN L26 (RPL26A) |
AT2G36160 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.3613
| Unknown | 40S RIBOSOMAL PROTEIN S14 (RPS14A) |
AT3G12580 | PredictedAffinity Capture-MS | FSW = 0.2902
| Unknown | HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING |
AT2G20450 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2681
| Unknown | 60S RIBOSOMAL PROTEIN L14 (RPL14A) |
AT3G13080 | PredictedAffinity Capture-MS | FSW = 0.1556
| Unknown | ATMRP3 ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES / CHLOROPHYLL CATABOLITE TRANSPORTER/ GLUTATHIONE S-CONJUGATE-EXPORTING ATPASE |
AT3G20390 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.5565
| Unknown | ENDORIBONUCLEASE L-PSP FAMILY PROTEIN |
AT3G08950 | PredictedAffinity Capture-MS | FSW = 0.3449
| Unknown | ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN |
AT2G19860 | PredictedAffinity Capture-MS | FSW = 0.2726
| Unknown | HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE |
AT3G19980 | PredictedAffinity Capture-MS | FSW = 0.2428
| Unknown | ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE PHOSPHATASE |
AT1G18540 | PredictedAffinity Capture-MS | FSW = 0.3853
| Unknown | 60S RIBOSOMAL PROTEIN L6 (RPL6A) |
AT5G24400 | PredictedAffinity Capture-MS | FSW = 0.4669
| Unknown | EMB2024 (EMBRYO DEFECTIVE 2024) 6-PHOSPHOGLUCONOLACTONASE/ CATALYTIC |
AT3G16950 | PredictedAffinity Capture-MS | FSW = 0.3555
| Unknown | LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE |
AT5G65430 | PredictedAffinity Capture-MS | FSW = 0.0977
| Unknown | GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING |
AT2G31170 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.4686
| Unknown | SYCO ARATH ATP BINDING / AMINOACYL-TRNA LIGASE/ CYSTEINE-TRNA LIGASE/ NUCLEOTIDE BINDING |
AT1G21640 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.3367
| Unknown | NADK2 NAD+ KINASE/ CALMODULIN BINDING |
AT3G19160 | PredictedAffinity Capture-MS | FSW = 0.3452
| Unknown | ATIPT8 (ATP/ADP ISOPENTENYLTRANSFERASES) ADENYLATE DIMETHYLALLYLTRANSFERASE |
AT5G20010 | PredictedAffinity Capture-MS | FSW = 0.3753
| Unknown | RAN-1 GTP BINDING / GTPASE/ PROTEIN BINDING |
AT5G45420 | PredictedAffinity Capture-MS | FSW = 0.2961
| Unknown | MYB FAMILY TRANSCRIPTION FACTOR |
AT1G27970 | PredictedAffinity Capture-MS | FSW = 0.3142
| Unknown | NTF2B (NUCLEAR TRANSPORT FACTOR 2B) RAN GTPASE BINDING / PROTEIN TRANSPORTER |
AT1G73230 | PredictedAffinity Capture-MS | FSW = 0.0094
| Unknown | NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX (NAC) DOMAIN-CONTAINING PROTEIN |
AT2G14120 | PredictedAffinity Capture-MS | FSW = 0.1168
| Unknown | DYNAMIN-LIKE PROTEIN 2B (ADL2B) |
AT3G61430 | PredictedAffinity Capture-MS | FSW = 0.4268
| Unknown | PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A) WATER CHANNEL |
AT3G09740 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2892
| Unknown | SYP71 (SYNTAXIN OF PLANTS 71) PROTEIN TRANSPORTER |
AT5G52640 | Predictedsynthetic growth defect | FSW = 0.0149
| Unknown | ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING |
AT1G63290 | PredictedAffinity Capture-MS | FSW = 0.3883
| Unknown | RIBULOSE-PHOSPHATE 3-EPIMERASE CYTOSOLIC PUTATIVE / PENTOSE-5-PHOSPHATE 3-EPIMERASE PUTATIVE |
AT5G62300 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2681
| Unknown | 40S RIBOSOMAL PROTEIN S20 (RPS20C) |
AT5G43370 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3324
| Unknown | APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER |
AT1G09630 | Predictedin vivoin vitroAffinity Capture-MSin vitroin vivoCo-expression | FSW = 0.0034
| Unknown | ATRAB11C (ARABIDOPSIS RAB GTPASE 11C) GTP BINDING |
AT1G22300 | PredictedAffinity Capture-MS | FSW = 0.0784
| Unknown | GRF10 (GENERAL REGULATORY FACTOR 10) ATP BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING |
AT1G32090 | PredictedAffinity Capture-MS | FSW = 0.0193
| Unknown | EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED |
AT4G24400 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.4366
| Unknown | CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) KINASE/ PROTEIN KINASE |
AT1G20760 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.5103
| Unknown | CALCIUM-BINDING EF HAND FAMILY PROTEIN |
AT1G09640 | PredictedAffinity Capture-MS | FSW = 0.2827
| Unknown | ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE |
AT4G35310 | PredictedAffinity Capture-MS | FSW = 0.4013
| Unknown | CPK5 (CALMODULIN-DOMAIN PROTEIN KINASE 5) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT2G07640 | PredictedAffinity Capture-MS | FSW = 0.0652
| Unknown | D2D4-DIENOYL-COA REDUCTASE-RELATED |
AT2G41790 | PredictedAffinity Capture-MS | FSW = 0.0339
| Unknown | PEPTIDASE M16 FAMILY PROTEIN / INSULINASE FAMILY PROTEIN |
AT4G26600 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.2952
| Unknown | NUCLEOLAR PROTEIN PUTATIVE |
AT1G74060 | PredictedAffinity Capture-MS | FSW = 0.1713
| Unknown | 60S RIBOSOMAL PROTEIN L6 (RPL6B) |
AT5G44500 | PredictedAffinity Capture-MS | FSW = 0.3142
| Unknown | SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE |
AT2G30050 | PredictedAffinity Capture-MSin vitroin vivotwo hybridCo-expression | FSW = 0.0047
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT2G37470 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2845
| Unknown | HISTONE H2B PUTATIVE |
AT1G34065 | PredictedAffinity Capture-MS | FSW = 0.2876
| Unknown | SAMC2 (S-ADENOSYLMETHIONINE CARRIER 2) BINDING |
AT2G18450 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.4713
| Unknown | SDH1-2 SUCCINATE DEHYDROGENASE |
AT1G72480 | PredictedAffinity Capture-MS | FSW = 0.3188
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN GOLGI APPARATUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G010701) HAS 422 BLAST HITS TO 420 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 208 FUNGI - 101 PLANTS - 83 VIRUSES - 0 OTHER EUKARYOTES - 30 (SOURCE NCBI BLINK) |
AT2G13650 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3046
| Unknown | GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER |
AT4G30990 | PredictedAffinity Capture-MS | FSW = 0.4278
| Unknown | BINDING |
AT3G16050 | PredictedAffinity Capture-MS | FSW = 0.2083
| Unknown | A37 PROTEIN HETERODIMERIZATION |
AT3G52580 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3839
| Unknown | 40S RIBOSOMAL PROTEIN S14 (RPS14C) |
AT5G41480 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3266
| Unknown | GLA1 (GLOBULAR ARREST1) DIHYDROFOLATE SYNTHASE |
AT3G25980 | PredictedSynthetic Lethality | FSW = 0.0120
| Unknown | MITOTIC SPINDLE CHECKPOINT PROTEIN PUTATIVE (MAD2) |
AT3G10660 | PredictedAffinity Capture-MS | FSW = 0.0508
| Unknown | CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2) CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT3G12530 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.5118
| Unknown | PSF2 |
AT1G05910 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0946
| Unknown | CELL DIVISION CYCLE PROTEIN 48-RELATED / CDC48-RELATED |
AT1G20920 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3533
| Unknown | DEAD BOX RNA HELICASE PUTATIVE |
AT1G24290 | Predictedtwo hybrid | FSW = 0.0149
| Unknown | AAA-TYPE ATPASE FAMILY PROTEIN |
AT1G31170 | PredictedAffinity Capture-MS | FSW = 0.0281
| Unknown | SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS |
AT1G54290 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.2510
| Unknown | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE |
AT2G37540 | PredictedAffinity Capture-MS | FSW = 0.3916
| Unknown | SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN |
AT2G44820 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0050
| Unknown | UNKNOWN PROTEIN |
AT3G12490 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0041
| Unknown | CYSTEINE PROTEASE INHIBITOR PUTATIVE / CYSTATIN PUTATIVE |
AT3G52390 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.4074
| Unknown | TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN |
AT3G62770 | PredictedAffinity Capture-MS | FSW = 0.2853
| Unknown | ATATG18A |
AT4G11330 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.2087
| Unknown | ATMPK5 (MAP KINASE 5) MAP KINASE/ KINASE |
AT4G39330 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.5122
| Unknown | CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING |
AT5G19820 | PredictedAffinity Capture-MS | FSW = 0.2351
| Unknown | EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE |
AT1G11660 | PredictedAffinity Capture-MS | FSW = 0.0489
| Unknown | HEAT SHOCK PROTEIN PUTATIVE |
AT1G33770 | PredictedAffinity Capture-MS | FSW = 0.0810
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT1G34580 | PredictedAffinity Capture-MS | FSW = 0.0844
| Unknown | MONOSACCHARIDE TRANSPORTER PUTATIVE |
AT1G44180 | PredictedAffinity Capture-MS | FSW = 0.0207
| Unknown | AMINOACYLASE PUTATIVE / N-ACYL-L-AMINO-ACID AMIDOHYDROLASE PUTATIVE |
AT1G55730 | PredictedAffinity Capture-MS | FSW = 0.4316
| Unknown | ATCAX5 CALCIUMCATION ANTIPORTER/ CATIONCATION ANTIPORTER |
AT1G64480 | PredictedAffinity Capture-MS | FSW = 0.3149
| Unknown | CBL8 (CALCINEURIN B-LIKE PROTEIN 8) CALCIUM ION BINDING |
AT1G71280 | PredictedAffinity Capture-MS | FSW = 0.3115
| Unknown | DEAD/DEAH BOX HELICASE PUTATIVE |
AT2G03040 | PredictedAffinity Capture-MS | FSW = 0.4050
| Unknown | TRANSMEMBRANE PROTEIN-RELATED |
AT2G16090 | PredictedAffinity Capture-MS | FSW = 0.4177
| Unknown | ZINC FINGER PROTEIN-RELATED |
AT2G16740 | PredictedAffinity Capture-MS | FSW = 0.4137
| Unknown | UBC29 (UBIQUITIN-CONJUGATING ENZYME 29) UBIQUITIN-PROTEIN LIGASE |
AT2G19910 | PredictedAffinity Capture-MS | FSW = 0.3779
| Unknown | RNA-DEPENDENT RNA POLYMERASE FAMILY PROTEIN |
AT2G21250 | PredictedAffinity Capture-MS | FSW = 0.2886
| Unknown | MANNOSE 6-PHOSPHATE REDUCTASE (NADPH-DEPENDENT) PUTATIVE |
AT2G28720 | Predictedtwo hybrid | FSW = 0.0205
| Unknown | HISTONE H2B PUTATIVE |
AT3G01090 | Predictedbiochemical | FSW = 0.0149
| Unknown | AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10) PROTEIN BINDING / PROTEIN KINASE |
AT3G05960 | PredictedAffinity Capture-MS | FSW = 0.3537
| Unknown | STP6 (SUGAR TRANSPORTER 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER |
AT3G11900 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.1928
| Unknown | ANT1 (AROMATIC AND NEUTRAL TRANSPORTER 1) AMINO ACID TRANSMEMBRANE TRANSPORTER/ AROMATIC AMINO ACID TRANSMEMBRANE TRANSPORTER/ NEUTRAL AMINO ACID TRANSMEMBRANE TRANSPORTER |
AT3G12200 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0821
| Unknown | ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE |
AT3G19940 | PredictedAffinity Capture-MS | FSW = 0.2802
| Unknown | SUGAR TRANSPORTER PUTATIVE |
AT3G21460 | PredictedAffinity Capture-MS | FSW = 0.0340
| Unknown | ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE |
AT3G23570 | PredictedAffinity Capture-MS | FSW = 0.5129
| Unknown | DIENELACTONE HYDROLASE FAMILY PROTEIN |
AT3G30842 | PredictedAffinity Capture-MS | FSW = 0.2434
| Unknown | PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING |
AT3G53570 | Predictedbiochemical | FSW = 0.0074
| Unknown | AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT3G59410 | PredictedAffinity Capture-MS | FSW = 0.1464
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT4G26230 | PredictedAffinity Capture-MS | FSW = 0.1739
| Unknown | 60S RIBOSOMAL PROTEIN L31 (RPL31B) |
AT4G36800 | PredictedAffinity Capture-MS | FSW = 0.4289
| Unknown | RCE1 (RUB1 CONJUGATING ENZYME 1) NEDD8 LIGASE/ SMALL CONJUGATING PROTEIN LIGASE |
AT5G06420 | PredictedAffinity Capture-MS | FSW = 0.4776
| Unknown | ZINC FINGER (CCCH-TYPE/C3HC4-TYPE RING FINGER) FAMILY PROTEIN |
AT5G16750 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2432
| Unknown | TOZ (TORMOZEMBRYO DEFECTIVE) NUCLEOTIDE BINDING |
AT5G17000 | PredictedAffinity Capture-MS | FSW = 0.3266
| Unknown | NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE |
AT5G37850 | PredictedAffinity Capture-MS | FSW = 0.4120
| Unknown | SOS4 (SALT OVERLY SENSITIVE 4) KINASE/ PYRIDOXAL KINASE |
AT5G41190 | PredictedAffinity Capture-MS | FSW = 0.2983
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK) |
AT5G46150 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.5211
| Unknown | LEM3 (LIGAND-EFFECT MODULATOR 3) FAMILY PROTEIN / CDC50 FAMILY PROTEIN |
AT5G67380 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.3093
| Unknown | CKA1 (CASEIN KINASE ALPHA 1) KINASE |
AT5G57890 | PredictedAffinity Capture-MS | FSW = 0.1574
| Unknown | ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE |
AT4G19440 | PredictedGene fusion method | FSW = 0.0098
| Unknown | PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN |
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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454