Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT5G55090 - ( MAPKKK15 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase )

24 Proteins interacs with AT5G55090
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT2G42580

Experimental

phage display

FSW = 0.0145

Unknown

TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3) BINDING / PROTEIN BINDING
AT5G45130

Predicted

Affinity Capture-MS

FSW = 0.0358

Unknown

RHA1 (RAB HOMOLOG 1) GTP BINDING
AT4G01370

Predicted

Affinity Capture-Western

co-fractionation

Co-fractionation

Reconstituted Complex

two hybrid

fluorescence acceptor donor pair

FSW = 0.0572

Unknown

ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4) MAP KINASE/ KINASE
AT1G16030

Predicted

Affinity Capture-Western

FSW = 0.0117

Unknown

HSP70B (HEAT SHOCK PROTEIN 70B) ATP BINDING
AT5G16010

Predicted

Phenotypic Suppression

FSW = 0.1481

Unknown

3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE FAMILY PROTEIN / STEROID 5-ALPHA-REDUCTASE FAMILY PROTEIN
AT5G40610

Predicted

interologs mapping

FSW = 0.0456

Unknown

GLYCEROL-3-PHOSPHATE DEHYDROGENASE (NAD+) / GPDH
AT3G04770

Predicted

Phenotypic Suppression

FSW = 0.0123

Unknown

RPSAB (40S RIBOSOMAL PROTEIN SA B) STRUCTURAL CONSTITUENT OF RIBOSOME
AT5G56030

Predicted

Affinity Capture-Western

FSW = 0.0263

Unknown

HSP81-2 (HEAT SHOCK PROTEIN 81-2) ATP BINDING
AT4G34460

Predicted

Phenotypic Enhancement

Synthetic Rescue

FSW = 0.0766

Unknown

AGB1 (GTP BINDING PROTEIN BETA 1) GTPASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT4G29810

Predicted

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

biochemical

FSW = 0.0654

Unknown

ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2) MAP KINASE KINASE/ KINASE
AT5G52640

Predicted

Affinity Capture-Western

Affinity Capture-Western

Phenotypic Suppression

two hybrid

FSW = 0.0107

Unknown

ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT3G57530

Predicted

biochemical

FSW = 0.0813

Unknown

CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32) CALCIUM-DEPENDENT PROTEIN KINASE C/ CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING
AT2G26300

Predicted

Synthetic Rescue

FSW = 0.0585

Unknown

GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1) GTP BINDING / GTPASE/ CHANNEL REGULATOR/ SIGNAL TRANSDUCER
AT1G19120

Predicted

two hybrid

FSW = 0.0096

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT2G18290

Predicted

Synthetic Lethality

FSW = 0.0160

Unknown

ANAPHASE-PROMOTING COMPLEX SUBUNIT 10 FAMILY / APC10 FAMILY
AT3G45630

Predicted

Phenotypic Suppression

FSW = 0.0320

Unknown

RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT1G02080Predicted

Phenotypic Suppression

FSW = 0.0416

Unknown

TRANSCRIPTIONAL REGULATOR-RELATED
AT1G17140

Predicted

Phenotypic Suppression

FSW = 0.0429

Unknown

TROPOMYOSIN-RELATED
AT1G17720

Predicted

Phenotypic Suppression

FSW = 0.0119

Unknown

ATB BETA NUCLEOTIDE BINDING / PROTEIN PHOSPHATASE TYPE 2A REGULATOR
AT1G67070

Predicted

synthetic growth defect

FSW = 0.1226

Unknown

DIN9 (DARK INDUCIBLE 9) MANNOSE-6-PHOSPHATE ISOMERASE
AT4G31770

Predicted

Phenotypic Suppression

FSW = 0.0121

Unknown

CALCINEURIN-LIKE PHOSPHOESTERASE FAMILY PROTEIN
AT4G34490

Predicted

Phenotypic Suppression

FSW = 0.0165

Unknown

ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1) ACTIN BINDING
AT5G09550

Predicted

Affinity Capture-MS

FSW = 0.0390

Unknown

RAB GDP-DISSOCIATION INHIBITOR
AT5G58690

Predicted

interologs mapping

FSW = 0.0191

Unknown

PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN

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Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454