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AT5G63400 - ( ADK1 (ADENYLATE KINASE 1) ATP binding / adenylate kinase/ nucleobase nucleoside nucleotide kinase/ nucleotide kinase/ phosphotransferase phosphate group as acceptor )

118 Proteins interacs with AT5G63400

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT5G50370	Predicted Enriched domain pair Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.1759	Class C: vacuole unclear mitochondrion	ADENYLATE KINASE PUTATIVE
AT3G16480	Predicted Affinity Capture-MS	FSW = 0.0085	Class C: vacuole unclear mitochondrion	MPPALPHA (MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT) CATALYTIC/ METAL ION BINDING / METALLOENDOPEPTIDASE/ ZINC ION BINDING
AT4G14960	Predicted two hybrid	FSW = 0.0053	Class C: vacuole unclear	TUA6 STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT1G23190	Predicted two hybrid	FSW = 0.0188	Class C: vacuole	PHOSPHOGLUCOMUTASE CYTOPLASMIC PUTATIVE / GLUCOSE PHOSPHOMUTASE PUTATIVE
AT3G49010	Predicted biochemical	FSW = 0.0055	Class C: vacuole	ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G08710	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0374	Class C: vacuole	ATH9 (THIOREDOXIN H-TYPE 9)
AT3G60640	Predicted biochemical	FSW = 0.0164	Class C: vacuole	ATG8G (AUTOPHAGY 8G) MICROTUBULE BINDING
AT3G62870	Predicted synthetic growth defect	FSW = 0.0371	Class C: vacuole	60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT5G01820	Predicted Synthetic Rescue	FSW = 0.0102	Class C: vacuole	ATSR1 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G26030	Predicted Synthetic Rescue	FSW = 0.0177	Class C: unclear mitochondrion	FC1 (FERROCHELATASE 1) FERROCHELATASE
AT2G37250	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.0175	Class C: unclear	ADK (ADENOSINE KINASE) ADENYLATE KINASE/ NUCLEOTIDE KINASE
AT4G33650	Predicted two hybrid synthetic growth defect	FSW = 0.0338	Class C: mitochondrion	DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP BINDING / GTPASE/ PHOSPHOINOSITIDE BINDING
AT5G23140	Predicted pull down	FSW = 0.0121	Class C: mitochondrion	NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7) SERINE-TYPE ENDOPEPTIDASE
AT4G28220	Predicted Affinity Capture-MS	FSW = 0.0844	Class C: mitochondrion	NDB1 (NAD(P)H DEHYDROGENASE B1) NADH DEHYDROGENASE/ DISULFIDE OXIDOREDUCTASE
AT4G12590	Predicted biochemical	FSW = 0.0148	Class C: mitochondrion	UNKNOWN PROTEIN
AT4G28060	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1691	Class C: mitochondrion	CYTOCHROME C OXIDASE SUBUNIT 6B PUTATIVE
AT1G70190	Predicted biochemical	FSW = 0.0105	Class C: mitochondrion	RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G17270	Predicted biochemical	FSW = 0.0179	Class C: mitochondrion	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT2G18450	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0287	Class C: mitochondrion	SDH1-2 SUCCINATE DEHYDROGENASE
AT5G01410	Predicted interologs mapping	FSW = 0.0155	Unknown	RSR4 (REDUCED SUGAR RESPONSE 4) PROTEIN HETERODIMERIZATION/ PROTEIN HOMODIMERIZATION
AT1G07890	Predicted two hybrid Affinity Capture-Western	FSW = 0.0310	Unknown	APX1 (ASCORBATE PEROXIDASE 1) L-ASCORBATE PEROXIDASE
AT2G30390	Predicted interaction prediction	FSW = 0.0250	Unknown	FC2 (FERROCHELATASE 2) FERROCHELATASE
AT5G55220	Predicted pull down	FSW = 0.0329	Unknown	TRIGGER FACTOR TYPE CHAPERONE FAMILY PROTEIN
AT5G53480	Predicted two hybrid Synthetic Rescue interologs mapping interologs mapping interologs mapping two hybrid two hybrid two hybrid two hybrid two hybrid two hybrid two hybrid Synthetic Rescue two hybrid two hybrid two hybrid Affinity Capture-Western Affinity Capture-Western two hybrid Reconstituted Complex interologs mapping Synthetic Rescue Phenotypic Suppression biochemical	FSW = 0.0250	Unknown	IMPORTIN BETA-2 PUTATIVE
AT2G25140	Predicted Affinity Capture-MS	FSW = 0.0066	Unknown	CLPB4 (CASEIN LYTIC PROTEINASE B4) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT4G01900	Predicted pull down	FSW = 0.0141	Unknown	GLB1 (GLNB1 HOMOLOG) ACETYLGLUTAMATE KINASE REGULATOR
AT4G38200	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1619	Unknown	GUANINE NUCLEOTIDE EXCHANGE FAMILY PROTEIN
AT5G06290	Predicted Synthetic Lethality	FSW = 0.0702	Unknown	2-CYS PRX B (2-CYSTEINE PEROXIREDOXIN B) ANTIOXIDANT/ PEROXIREDOXIN
AT4G30950	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.2024	Unknown	FAD6 (FATTY ACID DESATURASE 6) OMEGA-6 FATTY ACID DESATURASE
AT1G10070	Predicted biochemical Phenotypic Enhancement	FSW = 0.0143	Unknown	ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) BRANCHED-CHAIN-AMINO-ACID TRANSAMINASE/ CATALYTIC
AT1G26160	Predicted Synthetic Rescue	FSW = 0.0288	Unknown	METAL-DEPENDENT PHOSPHOHYDROLASE HD DOMAIN-CONTAINING PROTEIN
ATCG00180	Predicted pull down	FSW = 0.0130	Unknown	RNA POLYMERASE BETA SUBUNIT-1
AT5G62880	Predicted Affinity Capture-Western Affinity Capture-Western Reconstituted Complex Phenotypic Enhancement Synthetic Rescue interologs mapping	FSW = 0.0261	Unknown	ARAC10 GTP BINDING
AT5G64740	Predicted Phenotypic Enhancement	FSW = 0.0269	Unknown	CESA6 (CELLULOSE SYNTHASE 6) CELLULOSE SYNTHASE/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G27450	Predicted biochemical	FSW = 0.0197	Unknown	APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1) ADENINE PHOSPHORIBOSYLTRANSFERASE
AT4G36490	Predicted biochemical	FSW = 0.0226	Unknown	SFH12 (SEC14-LIKE 12) PHOSPHATIDYLINOSITOL TRANSPORTER/ TRANSPORTER
AT5G52640	Predicted pull down	FSW = 0.0143	Unknown	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT1G22180	Predicted Affinity Capture-MS	FSW = 0.0576	Unknown	SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT4G11380	Predicted synthetic growth defect	FSW = 0.0059	Unknown	BETA-ADAPTIN PUTATIVE
AT4G33090	Predicted Affinity Capture-MS	FSW = 0.0521	Unknown	APM1 (AMINOPEPTIDASE M1) AMINOPEPTIDASE
AT4G29360	Predicted Affinity Capture-MS	FSW = 0.0094	Unknown	GLYCOSYL HYDROLASE FAMILY 17 PROTEIN
AT3G25540	Predicted synthetic growth defect	FSW = 0.0486	Unknown	LAG1
AT2G29140	Predicted Affinity Capture-MS	FSW = 0.0974	Unknown	APUM3 (ARABIDOPSIS PUMILIO 3) RNA BINDING / BINDING
AT4G00520	Predicted Affinity Capture-MS	FSW = 0.0256	Unknown	ACYL-COA THIOESTERASE FAMILY PROTEIN
AT3G60180	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.0403	Unknown	URIDYLATE KINASE PUTATIVE / URIDINE MONOPHOSPHATE KINASE PUTATIVE / UMP KINASE PUTATIVE
AT2G30260	Predicted biochemical	FSW = 0.0021	Unknown	U2B (U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B) RNA BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT4G29510	Predicted biochemical	FSW = 0.0080	Unknown	PRMT11 (ARGININE METHYLTRANSFERASE 11) PROTEIN-ARGININE N-METHYLTRANSFERASE
AT5G06550	Predicted two hybrid two hybrid Co-expression	FSW = 0.0184	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN CELL SURFACE RECEPTOR LINKED SIGNAL TRANSDUCTION EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 12 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CYCLIN-LIKE F-BOX (INTERPROIPR001810) TRANSCRIPTION FACTOR JUMONJI/ASPARTYL BETA-HYDROXYLASE (INTERPROIPR003347) TRANSCRIPTION FACTOR JUMONJI (INTERPROIPR013129) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS TRANSFERASE TRANSFERRING GLYCOSYL GROUPS (TAIRAT1G782801) HAS 1299 BLAST HITS TO 1289 PROTEINS IN 204 SPECIES ARCHAE - 0 BACTERIA - 195 METAZOA - 777 FUNGI - 106 PLANTS - 94 VIRUSES - 0 OTHER EUKARYOTES - 127 (SOURCE NCBI BLINK)
AT5G54840	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0102	Unknown	SGP1 GTP BINDING
AT2G47620	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0823	Unknown	ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING
AT1G60850	Predicted biochemical	FSW = 0.0184	Unknown	ATRPAC42 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT4G34430	Predicted Affinity Capture-MS	FSW = 0.0101	Unknown	CHB3 DNA BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING
AT3G07260	Predicted two hybrid	FSW = 0.0133	Unknown	FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN / FHA DOMAIN-CONTAINING PROTEIN
AT1G50060	Predicted Affinity Capture-MS	FSW = 0.0817	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT2G03120	Predicted biochemical	FSW = 0.0311	Unknown	ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) ASPARTIC-TYPE ENDOPEPTIDASE
AT3G22880	Predicted Affinity Capture-MS	FSW = 0.0105	Unknown	DMC1 (DISRUPTION OF MEIOTIC CONTROL 1) ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ DAMAGED DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT1G05180	Predicted Affinity Capture-MS	FSW = 0.0129	Unknown	AXR1 (AUXIN RESISTANT 1) SMALL PROTEIN ACTIVATING ENZYME
AT4G21160	Predicted Affinity Capture-MS	FSW = 0.0184	Unknown	ZAC ARF GTPASE ACTIVATOR/ PHOSPHOLIPID BINDING
AT1G77990	Predicted biochemical	FSW = 0.0195	Unknown	AST56 SULFATE TRANSMEMBRANE TRANSPORTER
AT3G13320	Predicted biochemical	FSW = 0.0123	Unknown	CAX2 (CATION EXCHANGER 2) CALCIUMCATION ANTIPORTER/ CALCIUMHYDROGEN ANTIPORTER
AT4G26840	Predicted Affinity Capture-MS	FSW = 0.0097	Unknown	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) PROTEIN BINDING / PROTEIN TAG
AT3G12280	Predicted Phenotypic Enhancement	FSW = 0.0039	Unknown	RBR1 (RETINOBLASTOMA-RELATED 1) TRANSCRIPTION FACTOR BINDING
AT1G07950	Predicted two hybrid	FSW = 0.0132	Unknown	SURFEIT LOCUS PROTEIN 5 FAMILY PROTEIN / SURF5 FAMILY PROTEIN
AT5G02820	Predicted two hybrid	FSW = 0.0168	Unknown	RHL2 (ROOT HAIRLESS 2) ATP BINDING / DNA BINDING / DNA TOPOISOMERASE (ATP-HYDROLYZING)/ IDENTICAL PROTEIN BINDING / PROTEIN BINDING
AT1G77670	Predicted pull down	FSW = 0.0102	Unknown	AMINOTRANSFERASE CLASS I AND II FAMILY PROTEIN
AT5G23230	Predicted pull down	FSW = 0.0073	Unknown	NIC2 (NICOTINAMIDASE 2) CATALYTIC/ NICOTINAMIDASE
AT1G05000	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0501	Unknown	TYROSINE SPECIFIC PROTEIN PHOSPHATASE FAMILY PROTEIN
AT1G07340	Predicted biochemical	FSW = 0.0155	Unknown	ATSTP2 (SUGAR TRANSPORTER 2) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G10210	Predicted Synthetic Rescue	FSW = 0.0388	Unknown	ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE
AT1G11475	Predicted biochemical	FSW = 0.0145	Unknown	NRPB10 DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT1G15240	Predicted biochemical	FSW = 0.0118	Unknown	PHOX (PX) DOMAIN-CONTAINING PROTEIN
AT1G20920	Predicted biochemical	FSW = 0.0219	Unknown	DEAD BOX RNA HELICASE PUTATIVE
AT1G23480	Predicted biochemical	FSW = 0.0347	Unknown	ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3) CELLULOSE SYNTHASE/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G34460	Predicted biochemical	FSW = 0.0325	Unknown	CYCB15 (CYCLIN B15) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G63370	Predicted Affinity Capture-MS	FSW = 0.0206	Unknown	FLAVIN-CONTAINING MONOOXYGENASE FAMILY PROTEIN / FMO FAMILY PROTEIN
AT1G67300	Predicted biochemical	FSW = 0.0179	Unknown	HEXOSE TRANSPORTER PUTATIVE
AT1G79210	Predicted Affinity Capture-Western	FSW = 0.0132	Unknown	20S PROTEASOME ALPHA SUBUNIT B PUTATIVE
AT1G80530	Predicted Affinity Capture-Western two hybrid Synthetic Rescue	FSW = 0.0274	Unknown	NODULIN FAMILY PROTEIN
AT1G80710	Predicted Affinity Capture-Western	FSW = 0.0120	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G06040	Predicted biochemical	FSW = 0.0186	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 17 PLANT STRUCTURES EXPRESSED DURING 10 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S LEUCINE-RICH REPEAT CYSTEINE-CONTAINING SUBTYPE (INTERPROIPR006553) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G219001) HAS 3642 BLAST HITS TO 1885 PROTEINS IN 175 SPECIES ARCHAE - 0 BACTERIA - 109 METAZOA - 2066 FUNGI - 492 PLANTS - 697 VIRUSES - 0 OTHER EUKARYOTES - 278 (SOURCE NCBI BLINK)
AT2G14560	Predicted biochemical	FSW = 0.0197	Unknown	LURP1 (LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA)
AT2G31760	Predicted Affinity Capture-MS	FSW = 0.0606	Unknown	ZINC FINGER PROTEIN-RELATED
AT2G31900	Predicted biochemical	FSW = 0.0083	Unknown	XIF MOTOR
AT2G32220	Predicted biochemical	FSW = 0.0218	Unknown	60S RIBOSOMAL PROTEIN L27 (RPL27A)
AT2G34890	Predicted biochemical	FSW = 0.0130	Unknown	CTP SYNTHASE PUTATIVE / UTP--AMMONIA LIGASE PUTATIVE
AT2G37540	Predicted biochemical	FSW = 0.0130	Unknown	SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN
AT2G43190	Predicted Affinity Capture-Western	FSW = 0.0084	Unknown	RIBONUCLEASE P FAMILY PROTEIN
AT2G46710	Predicted biochemical	FSW = 0.0034	Unknown	RAC GTPASE ACTIVATING PROTEIN PUTATIVE
AT2G47090	Predicted biochemical	FSW = 0.0313	Unknown	NUCLEIC ACID BINDING / PROTEIN BINDING / ZINC ION BINDING
AT3G08910	Predicted Affinity Capture-MS	FSW = 0.0519	Unknown	DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT3G18630	Predicted biochemical	FSW = 0.0208	Unknown	URACIL DNA GLYCOSYLASE FAMILY PROTEIN
AT3G24495	Predicted biochemical	FSW = 0.0299	Unknown	MSH7 (MUTS HOMOLOG 7) ATP BINDING / DAMAGED DNA BINDING / MISMATCHED DNA BINDING
AT3G49880	Predicted Affinity Capture-MS	FSW = 0.0252	Unknown	GLYCOSYL HYDROLASE FAMILY PROTEIN 43
AT3G59790	Predicted biochemical	FSW = 0.0195	Unknown	ATMPK10 MAP KINASE/ KINASE
AT4G20330	Predicted Phenotypic Enhancement	FSW = 0.0145	Unknown	TRANSCRIPTION INITIATION FACTOR-RELATED
AT4G30000	Predicted Affinity Capture-MS	FSW = 0.0473	Unknown	DIHYDROPTERIN PYROPHOSPHOKINASE PUTATIVE / DIHYDROPTEROATE SYNTHASE PUTATIVE / DHPS PUTATIVE
AT4G32530	Predicted biochemical	FSW = 0.0158	Unknown	VACUOLAR ATP SYNTHASE PUTATIVE / V-ATPASE PUTATIVE
AT4G32840	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0840	Unknown	PFK6 (PHOSPHOFRUCTOKINASE 6) 6-PHOSPHOFRUCTOKINASE
AT4G35620	Predicted biochemical	FSW = 0.0120	Unknown	CYCB22 (CYCLIN B22) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT5G06140	Predicted biochemical	FSW = 0.0102	Unknown	SNX1 (SORTING NEXIN 1) PHOSPHOINOSITIDE BINDING / PROTEIN BINDING
AT5G06620	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1786	Unknown	SDG38 (SET DOMAIN PROTEIN 38)
AT5G19360	Predicted two hybrid	FSW = 0.0111	Unknown	CPK34 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G24410	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0985	Unknown	GLUCOSAMINE/GALACTOSAMINE-6-PHOSPHATE ISOMERASE-RELATED
AT5G26667	Predicted interologs mapping Enriched domain pair Gene neighbors method Phylogenetic profile method	FSW = 0.0447	Unknown	PYR6 CYTIDYLATE KINASE/ URIDYLATE KINASE
AT5G41880	Predicted biochemical	FSW = 0.0065	Unknown	POLA3 DNA PRIMASE
AT5G56510	Predicted Affinity Capture-MS	FSW = 0.0747	Unknown	APUM12 (ARABIDOPSIS PUMILIO 12) RNA BINDING / BINDING
AT5G59440	Predicted Synthetic Rescue	FSW = 0.0311	Unknown	ZEU1 (ZEUS1) ATP BINDING / THYMIDYLATE KINASE
AT1G09300	Predicted Affinity Capture-MS	FSW = 0.0184	Unknown	METALLOPEPTIDASE M24 FAMILY PROTEIN
AT1G11930	Predicted Affinity Capture-MS	FSW = 0.0248	Unknown	ALANINE RACEMASE FAMILY PROTEIN
AT1G26320	Predicted Synthetic Lethality	FSW = 0.0110	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT2G32600	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0048	Unknown	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN
AT3G27110	Predicted Affinity Capture-MS	FSW = 0.0288	Unknown	PEPTIDASE M48 FAMILY PROTEIN
AT4G08500	Predicted biochemical	FSW = 0.0075	Unknown	MEKK1 (MAP KINASE KINASE KINASE 1) DNA BINDING / MAP KINASE KINASE KINASE/ KINASE/ KINASE BINDING / PROTEIN BINDING
AT4G22756	Predicted Affinity Capture-MS	FSW = 0.1254	Unknown	SMO1-2 (STEROL C4-METHYL OXIDASE 1-2) 44-DIMETHYL-9BETA19-CYCLOPROPYLSTEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE/ CATALYTIC
AT5G50870	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0148	Unknown	UBC27 (UBIQUITIN-CONJUGATING ENZYME 27) UBIQUITIN-PROTEIN LIGASE
AT5G59890	Predicted two hybrid	FSW = 0.0022	Unknown	ADF4 (ACTIN DEPOLYMERIZING FACTOR 4) ACTIN BINDING
AT5G61580	Predicted Affinity Capture-MS	FSW = 0.0972	Unknown	PFK4 (PHOSPHOFRUCTOKINASE 4) 6-PHOSPHOFRUCTOKINASE
AT3G19420	Predicted interaction prediction	FSW = 0.0121	Unknown	ATPEN2 (ARABIDOPSIS THALIANA PTEN 2) PHOSPHATASE/ PROTEIN TYROSINE PHOSPHATASE

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

AtPIN will be upgraded. Please send your suggestions here

AT5G63400 - ( ADK1 (ADENYLATE KINASE 1) ATP binding / adenylate kinase/ nucleobase nucleoside nucleotide kinase/ nucleotide kinase/ phosphotransferase phosphate group as acceptor )

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