Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT3G13445 - ( TBP1 (TATA BINDING PROTEIN 1) DNA binding / RNA polymerase II transcription factor/ binding )

275 Proteins interacs with AT3G13445
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT4G31720

Experimental

two hybrid

FSW = 0.0912

Class A:

nucleus

Class D:

nucleus (p = 0.78)

TAFII15 (TBP-ASSOCIATED FACTOR II 15) RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION FACTOR
AT4G17750

Experimental

pull down

affinity technology

two hybrid

FSW = 0.0114

Class A:

nucleus

Class D:

nucleus (p = 0.78)

HSF1 (HEAT SHOCK FACTOR 1) DNA BINDING / PROTEIN BINDING / TRANSCRIPTION FACTOR
AT1G32750

Experimental

two hybrid

FSW = 0.1329

Unknown

HAF01 DNA BINDING / HISTONE ACETYLTRANSFERASE
AT3G04920

Predicted

Affinity Capture-MS

FSW = 0.0116

Class C:

nucleus

40S RIBOSOMAL PROTEIN S24 (RPS24A)
AT1G33120Predicted

Affinity Capture-MS

FSW = 0.0169

Class C:

nucleus

60S RIBOSOMAL PROTEIN L9 (RPL90B)
AT3G09630

Predicted

Phenotypic Enhancement

FSW = 0.0547

Class C:

nucleus

60S RIBOSOMAL PROTEIN L4/L1 (RPL4A)
AT1G07930Predicted

Affinity Capture-MS

FSW = 0.2123

Class C:

nucleus

ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT3G44310

Predicted

Phenotypic Enhancement

FSW = 0.0104

Class C:

nucleus

NIT1 INDOLE-3-ACETONITRILE NITRILASE/ INDOLE-3-ACETONITRILE NITRILE HYDRATASE/ NITRILASE
AT4G12610

Predicted

Co-purification

Reconstituted Complex

FSW = 0.0531

Class C:

nucleus

TRANSCRIPTION INITIATION FACTOR IIF ALPHA SUBUNIT (TFIIF-ALPHA) FAMILY PROTEIN
AT3G16950

Predicted

Affinity Capture-MS

FSW = 0.1635

Class C:

nucleus

LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE
AT5G59690Predicted

Affinity Capture-MS

FSW = 0.0721

Class C:

nucleus

HISTONE H4
AT5G65430

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

FSW = 0.1115

Class C:

nucleus

GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G55920

Predicted

Phenotypic Enhancement

FSW = 0.1656

Class C:

nucleus

ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE
AT5G67630

Predicted

Affinity Capture-Western

Reconstituted Complex

Synthetic Lethality

FSW = 0.0294

Class C:

nucleus

DNA HELICASE PUTATIVE
AT5G22330

Predicted

Reconstituted Complex

Reconstituted Complex

Affinity Capture-Western

FSW = 0.0347

Class C:

nucleus

RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1) PROTEIN BINDING
AT5G60390

Predicted

Affinity Capture-MS

FSW = 0.1407

Class C:

nucleus

ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT5G60540

Predicted

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.1441

Class C:

nucleus

PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT5G12250

Predicted

Affinity Capture-MS

FSW = 0.0110

Class C:

nucleus

TUB6 (BETA-6 TUBULIN) STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT2G33370Predicted

Affinity Capture-MS

FSW = 0.0164

Class C:

nucleus

60S RIBOSOMAL PROTEIN L23 (RPL23B)
AT3G58680

Predicted

in vivo

Affinity Capture-Western

Reconstituted Complex

FSW = 0.0255

Class C:

nucleus

MBF1B (MULTIPROTEIN BRIDGING FACTOR 1B) DNA BINDING / TRANSCRIPTION COACTIVATOR
AT3G05530

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0245

Class C:

nucleus

RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A) ATPASE/ CALMODULIN BINDING
AT3G10330

Predicted

interologs mapping

Reconstituted Complex

Reconstituted Complex

Reconstituted Complex

Reconstituted Complex

Reconstituted Complex

Co-purification

Reconstituted Complex

Reconstituted Complex

Reconstituted Complex

Co-purification

Synthetic Lethality

interologs mapping

Synthetic Rescue

two hybrid

far western blotting

Co-crystal Structure

interaction prediction

Enriched domain pair

Gene neighbors method

Co-expression

FSW = 0.0525

Class C:

nucleus

TRANSCRIPTION INITIATION FACTOR IIB-2 / GENERAL TRANSCRIPTION FACTOR TFIIB-2 (TFIIB2)
AT2G44680

Predicted

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.0421

Class C:

nucleus

CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE
AT3G12480

Predicted

in vivo

in vitro

Affinity Capture-Western

interologs mapping

Synthetic Lethality

FSW = 0.0298

Class C:

nucleus

NF-YC11 (NUCLEAR FACTOR Y SUBUNIT C11) DNA BINDING / TRANSCRIPTION FACTOR
AT4G21010

Predicted

in vitro

in vitro

FSW = 0.0325

Class C:

nucleus

TRANSCRIPTION INITIATION FACTOR-RELATED
AT1G17790

Predicted

Affinity Capture-Western

Affinity Capture-MS

FSW = 0.0626

Class C:

nucleus

DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN
AT2G34450

Predicted

Phenotypic Enhancement

FSW = 0.1278

Class C:

nucleus

HIGH MOBILITY GROUP (HMG1/2) FAMILY PROTEIN
AT3G54610

Predicted

synthetic growth defect

interologs mapping

Affinity Capture-MS

Synthetic Lethality

FSW = 0.1187

Class C:

nucleus

GCN5 DNA BINDING / H3 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE
AT5G59710

Predicted

interaction prediction

FSW = 0.0289

Class C:

nucleus

VIP2 (VIRE2 INTERACTING PROTEIN2) PROTEIN BINDING / TRANSCRIPTION REGULATOR
AT3G09360

Predicted

in vitro

in vivo

Affinity Capture-Western

in vivo

in vitro

FSW = 0.0300

Class C:

nucleus

RNA POLYMERASE II TRANSCRIPTION FACTOR/ PROTEIN BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION REGULATOR/ TRANSLATION INITIATION FACTOR/ ZINC ION BINDING
AT1G44900

Predicted

in vitro

FSW = 0.0098

Class C:

nucleus

ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE
AT5G08190

Predicted

in vitro

interologs mapping

FSW = 0.0232

Class C:

nucleus

NF-YB12 (NUCLEAR FACTOR Y SUBUNIT B12) DNA BINDING / TRANSCRIPTION FACTOR
AT5G16820

Predicted

in vitro

in vivo

FSW = 0.0269

Class C:

nucleus

HSF3 (HEAT SHOCK FACTOR 3) DNA BINDING / TRANSCRIPTION FACTOR
AT3G07260

Predicted

Phenotypic Enhancement

FSW = 0.0487

Class C:

nucleus

FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN / FHA DOMAIN-CONTAINING PROTEIN
AT3G52250

Predicted

Phenotypic Suppression

FSW = 0.0930

Class C:

nucleus

DNA BINDING / TRANSCRIPTION FACTOR
AT2G01280Predicted

interaction prediction

Enriched domain pair

Co-expression

FSW = 0.0198

Class C:

nucleus

MEE65 (MATERNAL EFFECT EMBRYO ARREST 65) RNA POLYMERASE II TRANSCRIPTION FACTOR/ CATIONCHLORIDE SYMPORTER
AT2G24840

Predicted

interologs mapping

synthetic growth defect

FSW = 0.0120

Class C:

nucleus

AGL61 (AGAMOUS-LIKE 61) DNA BINDING / TRANSCRIPTION FACTOR
AT3G21540

Predicted

Reconstituted Complex

Reconstituted Complex

Synthetic Lethality

Synthetic Rescue

FSW = 0.0455

Class C:

nucleus

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G02680

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

in vitro

two hybrid

Affinity Capture-Western

Colocalization

FSW = 0.0864

Class C:

nucleus

TAF13 (TBP-ASSOCIATED FACTOR 13) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR
AT5G19310

Predicted

Affinity Capture-Western

Synthetic Lethality

interologs mapping

FSW = 0.0610

Class C:

nucleus

HOMEOTIC GENE REGULATOR PUTATIVE
AT3G54280

Predicted

Affinity Capture-MS

Colocalization

Affinity Capture-MS

interologs mapping

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

interologs mapping

Synthetic Lethality

interologs mapping

Reconstituted Complex

Reconstituted Complex

Reconstituted Complex

Reconstituted Complex

Affinity Capture-Western

Reconstituted Complex

in vivo

in vitro

Affinity Capture-Western

interologs mapping

Synthetic Lethality

Synthetic Rescue

Colocalization

Co-purification

interaction prediction

FSW = 0.0566

Class C:

nucleus

RGD3 (ROOT GROWTH DEFECTIVE 3) ATP BINDING / DNA BINDING / BINDING / HELICASE/ NUCLEIC ACID BINDING
AT5G59870

Predicted

Affinity Capture-MS

FSW = 0.2016

Class C:

nucleus

HTA6 DNA BINDING
AT4G17020

Predicted

Affinity Capture-Western

interaction prediction

FSW = 0.0299

Class C:

nucleus

TRANSCRIPTION FACTOR-RELATED
AT5G47670

Predicted

in vivo

in vitro

FSW = 0.0082

Class C:

nucleus

NF-YB6 (NUCLEAR FACTOR Y SUBUNIT B6) TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION ACTIVATOR BINDING / TRANSCRIPTION FACTOR
AT4G10710

Predicted

interologs mapping

Synthetic Lethality

synthetic growth defect

FSW = 0.0856

Class C:

nucleus

SPT16 (GLOBAL TRANSCRIPTION FACTOR C)
AT5G44500

Predicted

Affinity Capture-MS

FSW = 0.1372

Class C:

nucleus

SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT5G08180

Predicted

Affinity Capture-MS

FSW = 0.0083

Class C:

nucleus

RIBOSOMAL PROTEIN L7AE/L30E/S12E/GADD45 FAMILY PROTEIN
AT4G24440

Predicted

Reconstituted Complex

Reconstituted Complex

interologs mapping

interologs mapping

interologs mapping

Reconstituted Complex

Reconstituted Complex

Reconstituted Complex

Reconstituted Complex

Co-crystal Structure

Co-crystal Structure

Reconstituted Complex

Reconstituted Complex

Affinity Capture-MS

in vivo

in vitro

in vitro

in vivo

in vivo

in vivo

in vitro

Affinity Capture-MS

Co-crystal Structure

Reconstituted Complex

interologs mapping

interaction prediction

Enriched domain pair

Co-expression

FSW = 0.0693

Class C:

nucleus

TRANSCRIPTION INITIATION FACTOR IIA GAMMA CHAIN / TFIIA-GAMMA (TFIIA-S)
AT1G18340

Predicted

Co-purification

FSW = 0.0300

Class C:

nucleus

BASAL TRANSCRIPTION FACTOR COMPLEX SUBUNIT-RELATED
AT3G05060

Predicted

Affinity Capture-MS

FSW = 0.0128

Class C:

nucleus

SAR DNA-BINDING PROTEIN PUTATIVE
AT1G17680

Predicted

Reconstituted Complex

FSW = 0.0322

Class C:

nucleus

TRANSCRIPTION FACTOR-RELATED
AT4G20810

Predicted

Reconstituted Complex

Co-purification

in vitro

FSW = 0.0559

Class C:

nucleus

TRANSCRIPTION INITIATION FACTOR IIE (TFIIE) ALPHA SUBUNIT FAMILY PROTEIN / GENERAL TRANSCRIPTION FACTOR TFIIE FAMILY PROTEIN
AT2G47620

Predicted

Affinity Capture-MS

FSW = 0.0310

Class C:

nucleus

ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING
AT5G43840

Predicted

Phenotypic Enhancement

FSW = 0.0178

Class C:

nucleus

AT-HSFA6A DNA BINDING / TRANSCRIPTION FACTOR
AT1G07480

Predicted

Affinity Capture-MS

in vivo

FSW = 0.0474

Class C:

nucleus

TRANSCRIPTION FACTOR IIA LARGE SUBUNIT / TFIIA LARGE SUBUNIT (TFIIA-L)
AT5G25150

Predicted

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

in vivo

in vitro

Reconstituted Complex

interaction prediction

FSW = 0.0799

Class C:

nucleus

TAF5 (TBP-ASSOCIATED FACTOR 5) NUCLEOTIDE BINDING / TRANSCRIPTION REGULATOR
AT4G20400

Predicted

Reconstituted Complex

FSW = 0.0050

Class C:

nucleus

TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN
AT1G07470

Predicted

Reconstituted Complex

Co-crystal Structure

Co-crystal Structure

Reconstituted Complex

Reconstituted Complex

Reconstituted Complex

interologs mapping

interologs mapping

Reconstituted Complex

Reconstituted Complex

Reconstituted Complex

Co-crystal Structure

Reconstituted Complex

Reconstituted Complex

Co-crystal Structure

interologs mapping

interologs mapping

interaction prediction

Enriched domain pair

FSW = 0.0563

Class C:

nucleus

TRANSCRIPTION FACTOR IIA LARGE SUBUNIT PUTATIVE / TFIIA LARGE SUBUNIT PUTATIVE
AT2G13370

Predicted

Synthetic Rescue

FSW = 0.0663

Class C:

nucleus

CHR5 (CHROMATIN REMODELING 5) ATP BINDING / DNA BINDING / CHROMATIN BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G37470

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.1733

Class C:

nucleus

HISTONE H2B PUTATIVE
AT2G38560

Predicted

Synthetic Lethality

FSW = 0.0392

Class C:

nucleus

TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION ELONGATION FACTOR/ TRANSCRIPTION FACTOR
AT4G25340

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1624

Class C:

nucleus

IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT4G39160

Predicted

interaction prediction

FSW = 0.0492

Class C:

nucleus

DNA BINDING / TRANSCRIPTION FACTOR
AT1G55520

Predicted

Gene fusion method

Phylogenetic profile method

Co-expression

FSW = 0.2848

Class C:

nucleus

TBP2 (TATA BINDING PROTEIN 2) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ TATA-BINDING PROTEIN BINDING
AT4G32470

Predicted

Affinity Capture-MS

FSW = 0.1777

Unknown

UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE
AT3G47520

Predicted

Phenotypic Enhancement

FSW = 0.0887

Unknown

MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT4G16660

Predicted

Phenotypic Enhancement

FSW = 0.1415

Unknown

HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE
AT1G33140

Predicted

Affinity Capture-MS

Reconstituted Complex

FSW = 0.0260

Unknown

PGY2 (PIGGYBACK2) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G20260

Predicted

Phenotypic Enhancement

FSW = 0.0492

Unknown

HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT2G20450

Predicted

Affinity Capture-MS

FSW = 0.1558

Unknown

60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT2G37270

Predicted

interologs mapping

Reconstituted Complex

interologs mapping

Phenotypic Suppression

Synthetic Lethality

FSW = 0.0510

Unknown

ATRPS5B (RIBOSOMAL PROTEIN 5B) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G56190

Predicted

Affinity Capture-MS

FSW = 0.1405

Unknown

ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) BINDING / SOLUBLE NSF ATTACHMENT PROTEIN
AT1G22780

Predicted

Affinity Capture-MS

FSW = 0.2093

Unknown

PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G36750

Predicted

Phenotypic Enhancement

FSW = 0.0731

Unknown

QUINONE REDUCTASE FAMILY PROTEIN
AT3G08710

Predicted

Phenotypic Enhancement

FSW = 0.0764

Unknown

ATH9 (THIOREDOXIN H-TYPE 9)
AT2G45200

Predicted

Affinity Capture-Western

FSW = 0.0189

Unknown

GOS12 (GOLGI SNARE 12) SNARE BINDING
AT1G18070

Predicted

Affinity Capture-MS

FSW = 0.0207

Unknown

EF-1-ALPHA-RELATED GTP-BINDING PROTEIN PUTATIVE
AT3G62870

Predicted

Synthetic Lethality

FSW = 0.0735

Unknown

60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT3G30390

Predicted

Phenotypic Suppression

FSW = 0.0571

Unknown

AMINO ACID TRANSPORTER FAMILY PROTEIN
AT5G07090

Predicted

Phenotypic Enhancement

FSW = 0.0256

Unknown

40S RIBOSOMAL PROTEIN S4 (RPS4B)
AT3G08950

Predicted

Affinity Capture-MS

FSW = 0.1847

Unknown

ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN
AT2G19860

Predicted

Affinity Capture-MS

FSW = 0.1471

Unknown

HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT1G65540

Predicted

Affinity Capture-Western

FSW = 0.0258

Unknown

CALCIUM-BINDING EF HAND FAMILY PROTEIN
AT1G15210

Predicted

Affinity Capture-MS

FSW = 0.1829

Unknown

PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT3G08530

Predicted

Affinity Capture-MS

FSW = 0.0454

Unknown

CLATHRIN HEAVY CHAIN PUTATIVE
AT3G22890

Predicted

synthetic growth defect

FSW = 0.0835

Unknown

APS1 (ATP SULFURYLASE 1) SULFATE ADENYLYLTRANSFERASE (ATP)
AT1G65240

Predicted

co-fractionation

Co-fractionation

FSW = 0.0746

Unknown

ASPARTYL PROTEASE FAMILY PROTEIN
AT5G13050

Predicted

Affinity Capture-MS

FSW = 0.1697

Unknown

5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
AT1G56050

Predicted

Phenotypic Enhancement

FSW = 0.1258

Unknown

GTP-BINDING PROTEIN-RELATED
AT1G26160

Predicted

Synthetic Lethality

FSW = 0.0091

Unknown

METAL-DEPENDENT PHOSPHOHYDROLASE HD DOMAIN-CONTAINING PROTEIN
AT3G06040

Predicted

Affinity Capture-MS

FSW = 0.2219

Unknown

RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT4G35800

Predicted

Reconstituted Complex

Co-purification

Reconstituted Complex

Colocalization

FSW = 0.0489

Unknown

NRPB1 (RNA POLYMERASE II LARGE SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT5G23710

Predicted

in vitro

FSW = 0.0137

Unknown

DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT5G58230

Predicted

Affinity Capture-Western

FSW = 0.0274

Unknown

MSI1 (MULTICOPY SUPRESSOR OF IRA1) PROTEIN BINDING
AT5G56030

Predicted

Affinity Capture-MS

FSW = 0.0128

Unknown

HSP81-2 (HEAT SHOCK PROTEIN 81-2) ATP BINDING
AT5G52640

Predicted

Affinity Capture-MS

FSW = 0.0269

Unknown

ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT5G43370

Predicted

Affinity Capture-MS

FSW = 0.2041

Unknown

APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G78000

Predicted

Phenotypic Enhancement

FSW = 0.0099

Unknown

SULTR12 (SULFATE TRANSPORTER 12) SULFATE TRANSMEMBRANE TRANSPORTER
AT2G32670

Predicted

Phenotypic Enhancement

FSW = 0.1572

Unknown

ATVAMP725
AT5G03540

Predicted

Affinity Capture-Western

Synthetic Lethality

Reconstituted Complex

Phenotypic Suppression

Synthetic Rescue

FSW = 0.0687

Unknown

ATEXO70A1 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN A1) PROTEIN BINDING
AT1G22300

Predicted

Affinity Capture-MS

FSW = 0.0680

Unknown

GRF10 (GENERAL REGULATORY FACTOR 10) ATP BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G76810Predicted

two hybrid

FSW = 0.0117

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR 2 FAMILY PROTEIN / EIF-2 FAMILY PROTEIN
AT4G36860

Predicted

Affinity Capture-MS

FSW = 0.1788

Unknown

ZINC ION BINDING
AT5G19990

Predicted

Reconstituted Complex

Affinity Capture-Western

interaction prediction

FSW = 0.0488

Unknown

RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A) ATPASE
AT4G26110

Predicted

Affinity Capture-MS

FSW = 0.0247

Unknown

NAP11 (NUCLEOSOME ASSEMBLY PROTEIN11) DNA BINDING
AT5G26340

Predicted

Phenotypic Enhancement

FSW = 0.0451

Unknown

MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT2G39480

Predicted

Reconstituted Complex

FSW = 0.0842

Unknown

PGP6 (P-GLYCOPROTEIN 6) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT2G37790

Predicted

Phenotypic Enhancement

FSW = 0.1052

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G09640

Predicted

Affinity Capture-MS

FSW = 0.1359

Unknown

ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE
AT4G18800

Predicted

Phenotypic Enhancement

FSW = 0.0932

Unknown

ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D) GTP BINDING
AT5G17550

Predicted

Affinity Capture-MS

FSW = 0.0043

Unknown

PEX19-2
AT2G20510

Predicted

Synthetic Lethality

FSW = 0.0128

Unknown

ATTIM44-1 PROTEIN-TRANSMEMBRANE TRANSPORTING ATPASE
AT2G17270

Predicted

interologs mapping

FSW = 0.0830

Unknown

MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT2G41380

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0312

Unknown

EMBRYO-ABUNDANT PROTEIN-RELATED
AT2G30160

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1870

Unknown

MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT3G18480

Predicted

Phenotypic Enhancement

FSW = 0.0722

Unknown

ATCASP (ARABIDOPSIS THALIANA CCAAT-DISPLACEMENT PROTEIN ALTERNATIVELY SPLICED PRODUCT)
AT4G30990

Predicted

Affinity Capture-MS

FSW = 0.1251

Unknown

BINDING
AT2G13650

Predicted

Affinity Capture-MS

FSW = 0.1812

Unknown

GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT5G24090

Predicted

Synthetic Lethality

FSW = 0.0519

Unknown

ACIDIC ENDOCHITINASE (CHIB1)
AT4G33730

Predicted

Phenotypic Enhancement

FSW = 0.0742

Unknown

PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT5G02730

Predicted

Phenotypic Enhancement

FSW = 0.0462

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT2G19980

Predicted

Phenotypic Enhancement

FSW = 0.0892

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT3G54840

Predicted

Phenotypic Suppression

FSW = 0.1272

Unknown

ARA6 GTP BINDING / GTPASE
AT1G01020

Predicted

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Reconstituted Complex

Affinity Capture-Western

Reconstituted Complex

Reconstituted Complex

Reconstituted Complex

Affinity Capture-Western

Co-purification

Synthetic Lethality

Synthetic Rescue

FSW = 0.0895

Unknown

ARV1
AT3G07140

Predicted

Phenotypic Enhancement

FSW = 0.0822

Unknown

GPI TRANSAMIDASE COMPONENT GPI16 SUBUNIT FAMILY PROTEIN
AT2G38960

Predicted

Phenotypic Enhancement

FSW = 0.0077

Unknown

AERO2 (ARABIDOPSIS ENDOPLASMIC RETICULUM OXIDOREDUCTINS 2) FAD BINDING / ELECTRON CARRIER/ OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR / PROTEIN BINDING
AT3G60360

Predicted

Phenotypic Enhancement

FSW = 0.1165

Unknown

EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14)
AT1G16190

Predicted

interaction prediction

FSW = 0.0318

Unknown

DNA REPAIR PROTEIN RAD23 PUTATIVE
AT1G17810

Predicted

Synthetic Lethality

FSW = 0.0154

Unknown

BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN) WATER CHANNEL
AT3G52580

Predicted

Affinity Capture-MS

FSW = 0.2053

Unknown

40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT5G41480

Predicted

Affinity Capture-MS

FSW = 0.1351

Unknown

GLA1 (GLOBULAR ARREST1) DIHYDROFOLATE SYNTHASE
AT5G59180

Predicted

Reconstituted Complex

FSW = 0.0146

Unknown

NRPB7 DNA-DIRECTED RNA POLYMERASE/ RNA BINDING
AT3G25980

Predicted

two hybrid

FSW = 0.0128

Unknown

MITOTIC SPINDLE CHECKPOINT PROTEIN PUTATIVE (MAD2)
AT4G16420

Predicted

Synthetic Lethality

Synthetic Lethality

Affinity Capture-MS

Affinity Capture-Western

Phenotypic Enhancement

interologs mapping

interaction prediction

FSW = 0.2037

Unknown

ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR
AT4G39100

Predicted

Phenotypic Enhancement

FSW = 0.0541

Unknown

SHL1 (SHORT LIFE) TRANSCRIPTION FACTOR/ ZINC-MEDIATED TRANSCRIPTIONAL ACTIVATOR
AT5G09250

Predicted

in vitro

FSW = 0.0346

Unknown

KIWI DNA BINDING / PROTEIN BINDING / TRANSCRIPTION COACTIVATOR
AT3G12530

Predicted

Affinity Capture-MS

FSW = 0.1340

Unknown

PSF2
AT2G05170

Predicted

Phenotypic Suppression

FSW = 0.0387

Unknown

ATVPS11 BINDING / PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING
AT2G24040

Predicted

Affinity Capture-MS

FSW = 0.2086

Unknown

HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT2G29540

Predicted

Phenotypic Enhancement

FSW = 0.0722

Unknown

ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT5G38470

Predicted

Affinity Capture-Western

FSW = 0.0362

Unknown

DNA REPAIR PROTEIN RAD23 PUTATIVE
AT5G47880

Predicted

Affinity Capture-MS

FSW = 0.2309

Unknown

ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) TRANSLATION RELEASE FACTOR
AT4G17190

Predicted

Phenotypic Enhancement

FSW = 0.1061

Unknown

FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT4G17760

Predicted

two hybrid

FSW = 0.0021

Unknown

DAMAGED DNA BINDING / EXODEOXYRIBONUCLEASE III
AT5G45330

Predicted

Affinity Capture-MS

FSW = 0.0038

Unknown

UNKNOWN PROTEIN
AT1G19485Predicted

Reconstituted Complex

FSW = 0.0208

Unknown

AT HOOK MOTIF-CONTAINING PROTEIN
AT1G53780

Predicted

in vivo

FSW = 0.0216

Unknown

ATP BINDING / ATPASE/ HYDROLASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT1G54360

Predicted

Affinity Capture-Western

FSW = 0.0274

Unknown

TAF6B4 (TBP-ASSOCIATED FACTOR 6B4) RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION INITIATION FACTOR
AT1G55300

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Colocalization

Phenotypic Enhancement

FSW = 0.2377

Unknown

TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT2G04690

Predicted

in vitro

FSW = 0.0115

Unknown

CELLULAR REPRESSOR OF E1A-STIMULATED GENES (CREG) FAMILY
AT1G01510

Predicted

Reconstituted Complex

FSW = 0.0071

Unknown

AN (ANGUSTIFOLIA) PROTEIN BINDING
AT3G19040

Predicted

in vitro

two hybrid

FSW = 0.0819

Unknown

HAF2 (HISTONE ACETYLTRANSFERASE OF THE TAFII250 FAMILY 2) DNA BINDING / HISTONE ACETYLTRANSFERASE/ TRANSCRIPTION COFACTOR
AT3G52270Predicted

in vitro

FSW = 0.0347

Unknown

ATP BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR
AT4G11080

Predicted

in vivo

FSW = 0.0081

Unknown

HIGH MOBILITY GROUP (HMG1/2) FAMILY PROTEIN
AT5G13850

Predicted

in vivo

in vitro

FSW = 0.0038

Unknown

NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)
AT5G23420

Predicted

in vitro

FSW = 0.0088

Unknown

HMGB6 TRANSCRIPTION FACTOR
AT1G02080Predicted

Affinity Capture-Western

Synthetic Rescue

FSW = 0.0540

Unknown

TRANSCRIPTIONAL REGULATOR-RELATED
AT1G04480Predicted

Affinity Capture-MS

FSW = 0.0307

Unknown

60S RIBOSOMAL PROTEIN L23 (RPL23A)
AT1G04950

Predicted

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-Western

Colocalization

interaction prediction

FSW = 0.0913

Unknown

TAF6 (TBP-ASSOCIATED FACTOR 6) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION INITIATION FACTOR
AT1G07340

Predicted

Phenotypic Enhancement

FSW = 0.0291

Unknown

ATSTP2 (SUGAR TRANSPORTER 2) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G07705

Predicted

Affinity Capture-Western

FSW = 0.0341

Unknown

TRANSCRIPTION REGULATOR
AT1G08260

Predicted

Affinity Capture-Western

fluorescence acceptor donor pair

fluorescence acceptor donor pair

Phenotypic Suppression

FSW = 0.0469

Unknown

TIL1 (TILTED 1) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING / ZINC ION BINDING
AT1G08880

Predicted

Affinity Capture-MS

FSW = 0.0533

Unknown

H2AXA DNA BINDING
AT1G09020

Predicted

Synthetic Rescue

FSW = 0.0099

Unknown

SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4) PROTEIN KINASE ACTIVATOR
AT1G12130

Predicted

Phenotypic Enhancement

Affinity Capture-Western

FSW = 0.0669

Unknown

FLAVIN-CONTAINING MONOOXYGENASE FAMILY PROTEIN / FMO FAMILY PROTEIN
AT1G13580

Predicted

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.1115

Unknown

LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)
AT1G16280

Predicted

Affinity Capture-MS

FSW = 0.0100

Unknown

DEAD/DEAH BOX HELICASE PUTATIVE
AT1G19750

Predicted

Phenotypic Enhancement

FSW = 0.0801

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G20693

Predicted

Phenotypic Enhancement

FSW = 0.1441

Unknown

HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G23460

Predicted

Phenotypic Enhancement

FSW = 0.0907

Unknown

POLYGALACTURONASE
AT1G25155Predicted

Phenotypic Enhancement

FSW = 0.0913

Unknown

ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT1G26170Predicted

interaction prediction

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-MS

Reconstituted Complex

interologs mapping

FSW = 0.0437

Unknown

BINDING / PROTEIN TRANSPORTER
AT1G27040

Predicted

Phenotypic Enhancement

FSW = 0.0569

Unknown

NITRATE TRANSPORTER PUTATIVE
AT1G31170

Predicted

Phenotypic Enhancement

FSW = 0.0782

Unknown

SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS
AT1G32130

Predicted

Synthetic Rescue

FSW = 0.0377

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TFIIS N-TERMINAL (INTERPROIPR017923) IWS1 C-TERMINAL (INTERPROIPR008654) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS IWS1 C-TERMINUS FAMILY PROTEIN (TAIRAT4G190001) HAS 907 BLAST HITS TO 871 PROTEINS IN 182 SPECIES ARCHAE - 4 BACTERIA - 14 METAZOA - 417 FUNGI - 195 PLANTS - 42 VIRUSES - 8 OTHER EUKARYOTES - 227 (SOURCE NCBI BLINK)
AT1G34340

Predicted

Affinity Capture-Western

Affinity Capture-Western

FSW = 0.0683

Unknown

ESTERASE/LIPASE/THIOESTERASE FAMILY PROTEIN
AT1G51770

Predicted

Affinity Capture-MS

FSW = 0.1836

Unknown

UNKNOWN PROTEIN
AT1G52500

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

FSW = 0.1329

Unknown

ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G54140

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

Colocalization

FSW = 0.0795

Unknown

TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT) DNA BINDING / TRANSCRIPTION INITIATION FACTOR
AT1G57620

Predicted

Phenotypic Enhancement

FSW = 0.0410

Unknown

EMP24/GP25L/P24 FAMILY PROTEIN
AT1G61040

Predicted

Synthetic Rescue

Synthetic Rescue

FSW = 0.0312

Unknown

VIP5 (VERNALIZATION INDEPENDENCE 5) DNA BINDING
AT1G62880

Predicted

Affinity Capture-MS

FSW = 0.1704

Unknown

CORNICHON FAMILY PROTEIN
AT1G66740

Predicted

Affinity Capture-Western

interologs mapping

FSW = 0.0642

Unknown

SGA2
AT1G68020

Predicted

Phenotypic Enhancement

FSW = 0.0853

Unknown

ATTPS6 ALPHAALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT1G71280

Predicted

Affinity Capture-MS

FSW = 0.1561

Unknown

DEAD/DEAH BOX HELICASE PUTATIVE
AT1G73960

Predicted

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

FSW = 0.0836

Unknown

TAF2 (TBP-ASSOCIATED FACTOR 2) METALLOPEPTIDASE/ ZINC ION BINDING
AT1G76920

Predicted

Phenotypic Enhancement

FSW = 0.0929

Unknown

F-BOX FAMILY PROTEIN (FBX3)
AT1G78770

Predicted

Phenotypic Enhancement

FSW = 0.0969

Unknown

CELL DIVISION CYCLE FAMILY PROTEIN
AT2G15910

Predicted

Phenotypic Enhancement

FSW = 0.0738

Unknown

CSL ZINC FINGER DOMAIN-CONTAINING PROTEIN
AT2G21890

Predicted

Phenotypic Suppression

FSW = 0.0299

Unknown

CAD3 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 3) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT2G24960

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

FSW = 0.1023

Unknown

UNKNOWN PROTEIN
AT2G29190

Predicted

Phenotypic Enhancement

FSW = 0.0487

Unknown

APUM2 (ARABIDOPSIS PUMILIO 2) RNA BINDING / BINDING
AT2G29390

Predicted

Affinity Capture-MS

FSW = 0.1951

Unknown

SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2) 4-ALPHA-METHYL-DELTA7-STEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE
AT2G32765

Predicted

Phenotypic Enhancement

FSW = 0.0291

Unknown

SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5) PROTEIN TAG
AT2G34750

Predicted

Phenotypic Enhancement

FSW = 0.0886

Unknown

RNA POLYMERASE I SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3 FAMILY PROTEIN
AT2G37420

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2168

Unknown

KINESIN MOTOR PROTEIN-RELATED
AT2G46280

Predicted

interologs mapping

Synthetic Lethality

FSW = 0.0182

Unknown

TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1) NUCLEOTIDE BINDING / PROTEIN BINDING
AT2G46860

Predicted

Affinity Capture-MS

FSW = 0.1743

Unknown

ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT2G47420

Predicted

Affinity Capture-MS

FSW = 0.0182

Unknown

DIMETHYLADENOSINE TRANSFERASE PUTATIVE
AT3G06470

Predicted

Phenotypic Enhancement

FSW = 0.0418

Unknown

GNS1/SUR4 MEMBRANE FAMILY PROTEIN
AT3G06483

Predicted

Phenotypic Enhancement

FSW = 0.0855

Unknown

PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE
AT3G09800

Predicted

Phenotypic Suppression

FSW = 0.0692

Unknown

PROTEIN BINDING
AT3G10070

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Colocalization

Reconstituted Complex

FSW = 0.0735

Unknown

TAF12 (TBP-ASSOCIATED FACTOR 12) DNA BINDING / TRANSCRIPTION INITIATION FACTOR
AT3G12490

Predicted

Affinity Capture-Western

co-fractionation

Co-fractionation

interologs mapping

FSW = 0.0816

Unknown

CYSTEINE PROTEASE INHIBITOR PUTATIVE / CYSTATIN PUTATIVE
AT3G13210

Predicted

Phenotypic Enhancement

FSW = 0.0391

Unknown

CROOKED NECK PROTEIN PUTATIVE / CELL CYCLE PROTEIN PUTATIVE
AT1G05650

Predicted

Affinity Capture-MS

FSW = 0.1571

Unknown

POLYGALACTURONASE PUTATIVE / PECTINASE PUTATIVE
AT1G09270

Predicted

Phenotypic Enhancement

FSW = 0.0383

Unknown

IMPA-4 (IMPORTIN ALPHA ISOFORM 4) BINDING / PROTEIN TRANSPORTER
AT1G15440

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0515

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G15780

Predicted

two hybrid

FSW = 0.0525

Unknown

UNKNOWN PROTEIN
AT1G20696

Predicted

Affinity Capture-MS

FSW = 0.1800

Unknown

HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G21370

Predicted

Phenotypic Enhancement

FSW = 0.0638

Unknown

UNKNOWN PROTEIN
AT1G26320

Predicted

Phenotypic Suppression

FSW = 0.0862

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT1G29970

Predicted

Phenotypic Enhancement

FSW = 0.0620

Unknown

RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)
AT1G33110

Predicted

Affinity Capture-MS

FSW = 0.2187

Unknown

MATE EFFLUX FAMILY PROTEIN
AT1G34580

Predicted

Affinity Capture-MS

FSW = 0.1453

Unknown

MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G52740

Predicted

Affinity Capture-Western

FSW = 0.0751

Unknown

HTA9 (HISTONE H2A PROTEIN 9) DNA BINDING
AT1G73810

Predicted

interologs mapping

FSW = 0.0541

Unknown

UNKNOWN PROTEIN
AT1G76720

Predicted

Affinity Capture-MS

FSW = 0.2197

Unknown

GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR
AT2G01070

Predicted

Affinity Capture-Western

Affinity Capture-Western

Co-purification

FSW = 0.0424

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM INTEGRAL TO MEMBRANE EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G724801) HAS 500 BLAST HITS TO 499 PROTEINS IN 125 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 271 FUNGI - 99 PLANTS - 97 VIRUSES - 0 OTHER EUKARYOTES - 33 (SOURCE NCBI BLINK)
AT2G03130

Predicted

Phenotypic Enhancement

FSW = 0.1804

Unknown

RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G23070

Predicted

Affinity Capture-Western

biochemical

FSW = 0.0805

Unknown

CASEIN KINASE II ALPHA CHAIN PUTATIVE
AT3G11240

Predicted

Phenotypic Enhancement

FSW = 0.0855

Unknown

ATE2 (ARGININE-TRNA PROTEIN TRANSFERASE 2) ARGINYLTRANSFERASE
AT3G11290

Predicted

Phenotypic Enhancement

FSW = 0.0318

Unknown

UNKNOWN PROTEIN
AT3G12690

Predicted

Affinity Capture-MS

FSW = 0.1815

Unknown

AGC15 (AGC KINASE 15) KINASE
AT3G22590

Predicted

two hybrid

co-fractionation

Co-fractionation

FSW = 0.0544

Unknown

RNA POL II ACCESSORY FACTOR CDC73 FAMILY PROTEIN
AT3G23570

Predicted

Affinity Capture-MS

FSW = 0.1269

Unknown

DIENELACTONE HYDROLASE FAMILY PROTEIN
AT3G45630

Predicted

Reconstituted Complex

FSW = 0.0691

Unknown

RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT3G47120

Predicted

interaction prediction

two hybrid

Affinity Capture-Western

interologs mapping

FSW = 0.0264

Unknown

RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT3G48780

Predicted

Affinity Capture-MS

FSW = 0.0247

Unknown

SPT1 (SERINE PALMITOYLTRANSFERASE 1) SERINE C-PALMITOYLTRANSFERASE
AT3G52390

Predicted

Affinity Capture-MS

FSW = 0.1724

Unknown

TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT3G58560

Predicted

interologs mapping

Synthetic Rescue

Synthetic Lethality

FSW = 0.0314

Unknown

ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN
AT4G02120

Predicted

Affinity Capture-Western

interologs mapping

FSW = 0.0709

Unknown

CTP SYNTHASE PUTATIVE / UTP--AMMONIA LIGASE PUTATIVE
AT4G17770

Predicted

Affinity Capture-MS

FSW = 0.1936

Unknown

ATTPS5 PROTEIN BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT4G21480

Predicted

Phenotypic Enhancement

FSW = 0.0230

Unknown

CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT4G24040

Predicted

Phenotypic Enhancement

FSW = 0.0997

Unknown

TRE1 (TREHALASE 1) ALPHAALPHA-TREHALASE/ TREHALASE
AT4G26510

Predicted

Affinity Capture-Western

Affinity Capture-Western

Phenotypic Enhancement

Reconstituted Complex

FSW = 0.0594

Unknown

ATP BINDING / KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / URACIL PHOSPHORIBOSYLTRANSFERASE
AT4G27130

Predicted

Synthetic Lethality

FSW = 0.1041

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT4G34340

Predicted

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Colocalization

FSW = 0.0649

Unknown

TAF8 (TBP-ASSOCIATED FACTOR 8) DNA BINDING
AT4G38250

Predicted

Phenotypic Suppression

FSW = 0.0558

Unknown

AMINO ACID TRANSPORTER FAMILY PROTEIN
AT4G38630

Predicted

co-fractionation

Co-fractionation

FSW = 0.0265

Unknown

RPN10 (REGULATORY PARTICLE NON-ATPASE 10) PEPTIDE RECEPTOR
AT5G06600

Predicted

Phenotypic Suppression

FSW = 0.0614

Unknown

UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12) UBIQUITIN THIOLESTERASE/ UBIQUITIN-SPECIFIC PROTEASE
AT5G08160

Predicted

Synthetic Lethality

FSW = 0.0021

Unknown

ATPK3 ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G09390

Predicted

Affinity Capture-MS

FSW = 0.1746

Unknown

CD2-BINDING PROTEIN-RELATED
AT5G13840

Predicted

Phenotypic Enhancement

FSW = 0.0210

Unknown

FZR3 (FIZZY-RELATED 3) SIGNAL TRANSDUCER
AT5G14060

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.2040

Unknown

CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE
AT5G18230

Predicted

Affinity Capture-Western

interaction prediction

FSW = 0.0744

Unknown

TRANSCRIPTION REGULATOR NOT2/NOT3/NOT5 FAMILY PROTEIN
AT5G19660

Predicted

Affinity Capture-MS

FSW = 0.1761

Unknown

S1P (SITE-1 PROTEASE) ENDOPEPTIDASE/ SERINE-TYPE ENDOPEPTIDASE
AT5G41190

Predicted

Affinity Capture-MS

FSW = 0.1555

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)
AT5G42720

Predicted

Phenotypic Enhancement

FSW = 0.1107

Unknown

GLYCOSYL HYDROLASE FAMILY 17 PROTEIN
AT5G46280

Predicted

Synthetic Lethality

FSW = 0.0469

Unknown

DNA REPLICATION LICENSING FACTOR PUTATIVE
AT5G52200

Predicted

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.0450

Unknown

UNKNOWN PROTEIN
AT5G54940

Predicted

Phenotypic Enhancement

FSW = 0.0475

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT5G67540

Predicted

Phenotypic Enhancement

FSW = 0.0551

Unknown

GLYCOSYL HYDROLASE FAMILY PROTEIN 43
AT3G16840

Predicted

Affinity Capture-MS

FSW = 0.0269

Unknown

ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING
AT3G17630

Predicted

Affinity Capture-Western

FSW = 0.0257

Unknown

ATCHX19 (CATION/H+ EXCHANGER 19) MONOVALENT CATIONPROTON ANTIPORTER/ SODIUMHYDROGEN ANTIPORTER
AT3G29070

Predicted

interologs mapping

FSW = 0.0170

Unknown

PROTEIN TRANSMEMBRANE TRANSPORTER
AT4G04695

Predicted

Phenotypic Enhancement

FSW = 0.0644

Unknown

CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G13020

Predicted

Phenotypic Suppression

FSW = 0.0792

Unknown

MHK ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G16710

Predicted

Phenotypic Enhancement

FSW = 0.0625

Unknown

GLYCOSYLTRANSFERASE FAMILY PROTEIN 28
AT4G19006

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0180

Unknown

26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9)
AT4G19560

Predicted

Phenotypic Enhancement

FSW = 0.0531

Unknown

CYCT12 CYCLIN-DEPENDENT PROTEIN KINASE
AT4G22140

Predicted

Affinity Capture-MS

Affinity Capture-Western

FSW = 0.0526

Unknown

DNA BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G22330

Predicted

Phenotypic Enhancement

FSW = 0.0289

Unknown

ATCES1 CATALYTIC/ HYDROLASE ACTING ON CARBON-NITROGEN (BUT NOT PEPTIDE) BONDS IN LINEAR AMIDES
AT4G22753

Predicted

Affinity Capture-MS

FSW = 0.0255

Unknown

SMO1-3 (STEROL 4-ALPHA METHYL OXIDASE 1-3) 44-DIMETHYL-9BETA19-CYCLOPROPYLSTEROL-4ALPHA-METHYL OXIDASE/ CATALYTIC
AT4G34490

Predicted

Affinity Capture-MS

FSW = 0.0035

Unknown

ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1) ACTIN BINDING
AT4G36080Predicted

Affinity Capture-MS

FSW = 0.0716

Unknown

FAT DOMAIN-CONTAINING PROTEIN / PHOSPHATIDYLINOSITOL 3- AND 4-KINASE FAMILY PROTEIN
AT5G01770

Predicted

Phenotypic Enhancement

FSW = 0.0532

Unknown

RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING
AT5G11570

Predicted

Affinity Capture-Western

fluorescence acceptor donor pair

fluorescence acceptor donor pair

FSW = 0.0795

Unknown

PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN
AT5G19820

Predicted

Affinity Capture-Western

Affinity Capture-MS

interaction prediction

FSW = 0.1001

Unknown

EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT5G24840

Predicted

Phenotypic Enhancement

FSW = 0.0365

Unknown

TRNA (GUANINE-N7-)-METHYLTRANSFERASE
AT5G39500

Predicted

Phenotypic Suppression

FSW = 0.0091

Unknown

PATTERN FORMATION PROTEIN PUTATIVE
AT5G45620

Predicted

Phenotypic Enhancement

FSW = 0.1033

Unknown

26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9)
AT5G61010

Predicted

Phenotypic Enhancement

FSW = 0.0345

Unknown

ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2) PROTEIN BINDING
AT5G63670

Predicted

Affinity Capture-MS

FSW = 0.0423

Unknown

SPT42 (SPT4 HOMOLOG 2) POSITIVE TRANSCRIPTION ELONGATION FACTOR/ ZINC ION BINDING
AT2G10440

Predicted

interaction prediction

FSW = 0.0711

Unknown

UNKNOWN PROTEIN

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454