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AT5G65430 - ( GRF8 (GENERAL REGULATORY FACTOR 8) protein binding / protein phosphorylated amino acid binding )

126 Proteins interacs with AT5G65430

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT1G78300	Experimental	FSW = 0.0399	Class A: nucleus Class B: vacuole plastid plasma membrane peroxisome cytosol cytoskeleton Class D: cytosol (p = 0.67)	GRF2 (GENERAL REGULATORY FACTOR 2) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G37130	Experimental two hybrid	FSW = 0.0903	Class B: vacuole plastid plasma membrane nucleus Class D: cytosol (p = 0.67)	NIA2 (NITRATE REDUCTASE 2) NITRATE REDUCTASE (NADH)/ NITRATE REDUCTASE
AT1G75080	Experimental interaction detection method two hybrid Affinity Capture-Western affinity technology two hybrid	FSW = 0.0677	Class D: nucleus (p = 0.78)	BZR1 (BRASSINAZOLE-RESISTANT 1) DNA BINDING / TRANSCRIPTION REGULATOR/ TRANSCRIPTION REPRESSOR
AT4G27090	Predicted Phenotypic Suppression	FSW = 0.0411	Class C: plastid nucleus	60S RIBOSOMAL PROTEIN L14 (RPL14B)
AT5G10450	Predicted Gene fusion method Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.1147	Class C: plastid nucleus	GRF6 (G-BOX REGULATING FACTOR 6) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT4G09000	Predicted Phylogenetic profile method	FSW = 0.1635	Class C: plastid nucleus	14-3-3-LIKE PROTEIN GF14 CHI / GENERAL REGULATORY FACTOR 1 (GRF1)
AT1G74710	Predicted synthetic growth defect	FSW = 0.0525	Class C: plastid nucleus	ISOCHORISMATE SYNTHASE 1 (ICS1) / ISOCHORISMATE MUTASE
AT1G55920	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1261	Class C: plastid nucleus	ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE
AT2G01250	Predicted Affinity Capture-MS	FSW = 0.0331	Class C: plastid	60S RIBOSOMAL PROTEIN L7 (RPL7B)
AT3G47520	Predicted Phenotypic Enhancement	FSW = 0.0621	Class C: plastid	MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT5G09590	Predicted Phenotypic Enhancement	FSW = 0.1270	Class C: plastid	MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT4G16660	Predicted Phenotypic Enhancement	FSW = 0.0891	Class C: plastid	HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE
AT3G02520	Predicted Phylogenetic profile method Co-expression	FSW = 0.0493	Class C: plastid	GRF7 (GENERAL REGULATORY FACTOR 7) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G16030	Predicted Phenotypic Enhancement	FSW = 0.0165	Class C: plastid	HSP70B (HEAT SHOCK PROTEIN 70B) ATP BINDING
AT3G55400	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1016	Class C: plastid	OVA1 (OVULE ABORTION 1) ATP BINDING / AMINOACYL-TRNA LIGASE/ METHIONINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT2G39290	Predicted Affinity Capture-MS	FSW = 0.0248	Class C: plastid	PGP1 (PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 1) CDP-ALCOHOL PHOSPHATIDYLTRANSFERASE/ CDP-DIACYLGLYCEROL-GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE
AT2G40400	Predicted Phenotypic Enhancement	FSW = 0.0348	Class C: plastid	UNKNOWN PROTEIN
AT1G56050	Predicted Phenotypic Enhancement	FSW = 0.0782	Class C: plastid	GTP-BINDING PROTEIN-RELATED
AT5G15450	Predicted Phenotypic Suppression	FSW = 0.0437	Class C: plastid	CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT5G06290	Predicted biochemical	FSW = 0.0236	Class C: plastid	2-CYS PRX B (2-CYSTEINE PEROXIREDOXIN B) ANTIOXIDANT/ PEROXIREDOXIN
AT2G42590	Predicted Phylogenetic profile method Co-expression	FSW = 0.1216	Class C: nucleus	GRF9 (GENERAL REGULATORY FACTOR 9) CALCIUM ION BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G35160	Predicted Phylogenetic profile method	FSW = 0.0912	Class C: nucleus	GF14 PHI (GF14 PROTEIN PHI CHAIN) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT3G48930	Predicted biochemical	FSW = 0.0201	Class C: nucleus	EMB1080 (EMBRYO DEFECTIVE 1080) STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G23930	Predicted Affinity Capture-MS	FSW = 0.0281	Class C: nucleus	SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G)
AT2G34450	Predicted Phenotypic Enhancement	FSW = 0.0863	Class C: nucleus	HIGH MOBILITY GROUP (HMG1/2) FAMILY PROTEIN
AT4G26600	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0487	Class C: nucleus	NUCLEOLAR PROTEIN PUTATIVE
AT3G13445	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1115	Class C: nucleus	TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT4G25340	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1626	Class C: nucleus	IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT5G12840	Predicted Phenotypic Suppression	FSW = 0.0401	Class C: nucleus	NF-YA1 (NUCLEAR FACTOR Y SUBUNIT A1) TRANSCRIPTION FACTOR
AT2G20450	Predicted Affinity Capture-MS	FSW = 0.1236	Unknown	60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT4G36130	Predicted Phenotypic Enhancement	FSW = 0.0246	Unknown	60S RIBOSOMAL PROTEIN L8 (RPL8C)
AT5G10350	Predicted Phenotypic Enhancement	FSW = 0.0618	Unknown	POLYADENYLATE-BINDING PROTEIN FAMILY PROTEIN / PABP FAMILY PROTEIN
AT3G26590	Predicted biochemical	FSW = 0.0245	Unknown	MATE EFFLUX FAMILY PROTEIN
AT1G65540	Predicted Phenotypic Enhancement	FSW = 0.0092	Unknown	CALCIUM-BINDING EF HAND FAMILY PROTEIN
AT3G19980	Predicted Affinity Capture-MS	FSW = 0.0738	Unknown	ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT5G38480	Predicted Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.0868	Unknown	GRF3 (GENERAL REGULATORY FACTOR 3) ATP BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT5G58640	Predicted Phenotypic Enhancement	FSW = 0.0197	Unknown	SELENOPROTEIN-RELATED
AT4G36860	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1174	Unknown	ZINC ION BINDING
AT5G16050	Predicted Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.1724	Unknown	GRF5 (GENERAL REGULATORY FACTOR 5) ATP BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G04750	Predicted synthetic growth defect	FSW = 0.1077	Unknown	VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)
AT2G32670	Predicted Phenotypic Enhancement	FSW = 0.1481	Unknown	ATVAMP725
AT1G13320	Predicted Affinity Capture-MS	FSW = 0.0903	Unknown	PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3) BINDING / PROTEIN PHOSPHATASE TYPE 2A REGULATOR
AT1G22300	Predicted Phylogenetic profile method Co-expression	FSW = 0.1856	Unknown	GRF10 (GENERAL REGULATORY FACTOR 10) ATP BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT4G24400	Predicted Affinity Capture-MS	FSW = 0.1305	Unknown	CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) KINASE/ PROTEIN KINASE
AT2G39480	Predicted Phenotypic Enhancement	FSW = 0.0487	Unknown	PGP6 (P-GLYCOPROTEIN 6) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT2G37790	Predicted Phenotypic Enhancement	FSW = 0.0765	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT3G19930	Predicted Phenotypic Enhancement	FSW = 0.0702	Unknown	STP4 (SUGAR TRANSPORTER 4) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUCROSEHYDROGEN SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT5G43370	Predicted Affinity Capture-MS	FSW = 0.1017	Unknown	APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G32090	Predicted Phenotypic Enhancement	FSW = 0.0541	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT4G00520	Predicted Affinity Capture-MS	FSW = 0.0403	Unknown	ACYL-COA THIOESTERASE FAMILY PROTEIN
AT2G18700	Predicted Phenotypic Enhancement	FSW = 0.0361	Unknown	ATTPS11 TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT4G30990	Predicted Affinity Capture-MS	FSW = 0.0917	Unknown	BINDING
AT4G25780	Predicted Affinity Capture-MS	FSW = 0.0471	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT2G38960	Predicted Phenotypic Enhancement	FSW = 0.0163	Unknown	AERO2 (ARABIDOPSIS ENDOPLASMIC RETICULUM OXIDOREDUCTINS 2) FAD BINDING / ELECTRON CARRIER/ OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR / PROTEIN BINDING
AT3G08730	Predicted Affinity Capture-MS	FSW = 0.0360	Unknown	PK1 (PROTEIN-SERINE KINASE 1) KINASE/ PROTEIN BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT3G12530	Predicted Affinity Capture-MS	FSW = 0.1356	Unknown	PSF2
AT3G60360	Predicted Phenotypic Enhancement	FSW = 0.1004	Unknown	EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14)
AT3G52580	Predicted Affinity Capture-MS	FSW = 0.1275	Unknown	40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT4G29430	Predicted Affinity Capture-MS	FSW = 0.0375	Unknown	RPS15AE (RIBOSOMAL PROTEIN S15A E) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G22880	Predicted Affinity Capture-MS	FSW = 0.0568	Unknown	DMC1 (DISRUPTION OF MEIOTIC CONTROL 1) ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ DAMAGED DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT1G02970	Predicted Phenotypic Suppression	FSW = 0.0120	Unknown	WEE1 (ARABIDOPSIS WEE1 KINASE HOMOLOG) KINASE/ PROTEIN KINASE
AT1G05785	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0878	Unknown	GOT1-LIKE FAMILY PROTEIN
AT1G14310	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0855	Unknown	HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN
AT1G20693	Predicted Phenotypic Enhancement synthetic growth defect	FSW = 0.1529	Unknown	HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G27040	Predicted Phenotypic Suppression	FSW = 0.0761	Unknown	NITRATE TRANSPORTER PUTATIVE
AT1G34460	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0540	Unknown	CYCB15 (CYCLIN B15) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G55255	Predicted Phenotypic Enhancement	FSW = 0.0072	Unknown	CYCB15 (CYCLIN B15) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G60680	Predicted Phenotypic Enhancement	FSW = 0.0813	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G78770	Predicted Phenotypic Enhancement	FSW = 0.0650	Unknown	CELL DIVISION CYCLE FAMILY PROTEIN
AT1G79210	Predicted Affinity Capture-MS	FSW = 0.0446	Unknown	20S PROTEASOME ALPHA SUBUNIT B PUTATIVE
AT1G80710	Predicted Phenotypic Enhancement	FSW = 0.0406	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G31260	Predicted Phenotypic Enhancement	FSW = 0.0772	Unknown	APG9 (AUTOPHAGY 9)
AT2G34750	Predicted Phenotypic Enhancement	FSW = 0.0873	Unknown	RNA POLYMERASE I SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3 FAMILY PROTEIN
AT2G37420	Predicted Phenotypic Enhancement	FSW = 0.1650	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT2G38600	Predicted Phenotypic Enhancement	FSW = 0.0441	Unknown	ACID PHOSPHATASE CLASS B FAMILY PROTEIN
AT3G02000	Predicted Phenotypic Enhancement	FSW = 0.1537	Unknown	ROXY1 DISULFIDE OXIDOREDUCTASE
AT3G06460	Predicted Phenotypic Enhancement	FSW = 0.0394	Unknown	GNS1/SUR4 MEMBRANE FAMILY PROTEIN
AT3G06483	Predicted Phenotypic Enhancement	FSW = 0.0907	Unknown	PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE
AT3G11230	Predicted Phenotypic Enhancement	FSW = 0.0876	Unknown	YIPPEE FAMILY PROTEIN
AT3G11830	Predicted Phenotypic Enhancement	FSW = 0.0163	Unknown	CHAPERONIN PUTATIVE
AT3G13210	Predicted Phenotypic Enhancement	FSW = 0.1090	Unknown	CROOKED NECK PROTEIN PUTATIVE / CELL CYCLE PROTEIN PUTATIVE
AT3G18850	Predicted Phenotypic Enhancement	FSW = 0.0643	Unknown	LPAT5 ACYLTRANSFERASE
AT3G25597	Predicted Phenotypic Suppression	FSW = 0.0073	Unknown	UNKNOWN PROTEIN
AT3G27440	Predicted Phenotypic Enhancement	FSW = 0.0792	Unknown	URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE
AT3G62770	Predicted Affinity Capture-MS	FSW = 0.0953	Unknown	ATATG18A
AT4G00800	Predicted Phenotypic Enhancement	FSW = 0.1370	Unknown	BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G04695	Predicted Phenotypic Enhancement	FSW = 0.1031	Unknown	CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G25860	Predicted Affinity Capture-MS	FSW = 0.0555	Unknown	ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A) OXYSTEROL BINDING
AT4G25960	Predicted Phenotypic Suppression	FSW = 0.0132	Unknown	PGP2 (P-GLYCOPROTEIN 2) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT4G30820	Predicted Phenotypic Suppression	FSW = 0.0244	Unknown	CYCLIN-DEPENDENT KINASE-ACTIVATING KINASE ASSEMBLY FACTOR-RELATED / CDK-ACTIVATING KINASE ASSEMBLY FACTOR-RELATED
AT4G39330	Predicted Affinity Capture-MS	FSW = 0.1314	Unknown	CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT5G10830	Predicted Phenotypic Enhancement	FSW = 0.0181	Unknown	EMBRYO-ABUNDANT PROTEIN-RELATED
AT5G13860	Predicted Phenotypic Enhancement	FSW = 0.0223	Unknown	ELC-LIKE (ELCH-LIKE) SMALL CONJUGATING PROTEIN LIGASE
AT5G38110	Predicted Phenotypic Suppression	FSW = 0.0766	Unknown	ASF1B (ANTI- SILENCING FUNCTION 1B)
AT5G45620	Predicted Phenotypic Enhancement	FSW = 0.0865	Unknown	26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9)
AT5G57270	Predicted Phenotypic Enhancement	FSW = 0.0173	Unknown	UNKNOWN PROTEIN
AT5G58380	Predicted Phenotypic Enhancement	FSW = 0.0303	Unknown	SIP1 (SOS3-INTERACTING PROTEIN 1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G64760	Predicted Phenotypic Enhancement	FSW = 0.1185	Unknown	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)
AT1G18830	Predicted Phenotypic Enhancement	FSW = 0.0274	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G20696	Predicted Affinity Capture-MS	FSW = 0.0658	Unknown	HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G25155	Predicted synthetic growth defect	FSW = 0.0773	Unknown	ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT1G55300	Predicted Phenotypic Enhancement	FSW = 0.0899	Unknown	TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G55730	Predicted Affinity Capture-MS	FSW = 0.1326	Unknown	ATCAX5 CALCIUMCATION ANTIPORTER/ CATIONCATION ANTIPORTER
AT1G71530	Predicted Phenotypic Enhancement	FSW = 0.0281	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT2G03040	Predicted Affinity Capture-MS	FSW = 0.0736	Unknown	TRANSMEMBRANE PROTEIN-RELATED
AT2G03130	Predicted Phenotypic Enhancement	FSW = 0.1361	Unknown	RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G21250	Predicted Affinity Capture-MS	FSW = 0.1015	Unknown	MANNOSE 6-PHOSPHATE REDUCTASE (NADPH-DEPENDENT) PUTATIVE
AT2G24960	Predicted Phenotypic Enhancement	FSW = 0.1306	Unknown	UNKNOWN PROTEIN
AT2G31020	Predicted Affinity Capture-MS	FSW = 0.0301	Unknown	ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A) OXYSTEROL BINDING
AT2G36260	Predicted Phenotypic Suppression	FSW = 0.0361	Unknown	IRON-SULFUR CLUSTER ASSEMBLY COMPLEX PROTEIN PUTATIVE
AT2G41530	Predicted Affinity Capture-MS	FSW = 0.0498	Unknown	SFGH (S-FORMYLGLUTATHIONE HYDROLASE) S-FORMYLGLUTATHIONE HYDROLASE/ HYDROLASE ACTING ON ESTER BONDS
AT3G11290	Predicted Phenotypic Enhancement	FSW = 0.0451	Unknown	UNKNOWN PROTEIN
AT3G52390	Predicted Affinity Capture-MS	FSW = 0.1560	Unknown	TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT4G14000	Predicted Synthetic Lethality	FSW = 0.0047	Unknown	UNKNOWN PROTEIN
AT4G14240	Predicted biochemical	FSW = 0.0126	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF21 (INTERPROIPR002550) CYSTATHIONINE BETA-SYNTHASE CORE (INTERPROIPR000644) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS CBS DOMAIN-CONTAINING PROTEIN-RELATED (TAIRAT4G142301) HAS 6770 BLAST HITS TO 6657 PROTEINS IN 1347 SPECIES ARCHAE - 62 BACTERIA - 4461 METAZOA - 254 FUNGI - 179 PLANTS - 121 VIRUSES - 0 OTHER EUKARYOTES - 1693 (SOURCE NCBI BLINK)
AT5G24670	Predicted Affinity Capture-MS	FSW = 0.0104	Unknown	CATALYTIC/ HYDROLASE/ ZINC ION BINDING
AT5G46150	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0642	Unknown	LEM3 (LIGAND-EFFECT MODULATOR 3) FAMILY PROTEIN / CDC50 FAMILY PROTEIN
AT5G48710	Predicted Affinity Capture-MS	FSW = 0.0338	Unknown	UBIQUITIN-RELATED
AT5G54200	Predicted Affinity Capture-MS	FSW = 0.0977	Unknown	WD-40 REPEAT FAMILY PROTEIN
AT5G54940	Predicted Phenotypic Enhancement	FSW = 0.0695	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT5G57890	Predicted Affinity Capture-MS	FSW = 0.0895	Unknown	ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT5G67380	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0526	Unknown	CKA1 (CASEIN KINASE ALPHA 1) KINASE
AT1G26480	Predicted Phylogenetic profile method Co-expression	FSW = 0.1207	Unknown	GRF12 (GENERAL REGULATORY FACTOR 12) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G78220	Predicted Phylogenetic profile method Co-expression	FSW = 0.1986	Unknown	GRF13 PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G34760	Predicted Phylogenetic profile method Co-expression	FSW = 0.1341	Unknown	GRF11 (GENERAL REGULATORY FACTOR 11) ATPASE BINDING / AMINO ACID BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G22290	Predicted Phylogenetic profile method	FSW = 0.0401	Unknown	14-3-3 PROTEIN GF14 PUTATIVE (GRF10)

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT5G65430 - ( GRF8 (GENERAL REGULATORY FACTOR 8) protein binding / protein phosphorylated amino acid binding )

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