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AT4G30190 - ( AHA2 ATPase/ hydrogen-exporting ATPase phosphorylative mechanism )

16 Proteins interacs with AT4G30190

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT1G78300	Experimental far western blotting	FSW = 0.0305	Class A: vacuole plasma membrane Class B: peroxisome nucleus cytosol cytoskeleton Class D: plasma membrane (p = 0.25) cytosol (p = 0.67)	GRF2 (GENERAL REGULATORY FACTOR 2) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G35160	Experimental two hybrid	FSW = 0.0360	Class A: plasma membrane Class B: vacuole nucleus cytosol cytoskeleton Class D: cytosol (p = 0.67)	GF14 PHI (GF14 PROTEIN PHI CHAIN) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT2G01950	Experimental phage display	FSW = 0.0265	Class D: cytosol (p = 0.67)	BRL2 (BRI1-LIKE 2) ATP BINDING / PROTEIN SERINE/THREONINE KINASE/ TRANSMEMBRANE RECEPTOR PROTEIN SERINE/THREONINE KINASE
AT3G21640	Experimental Reconstituted Complex	FSW = 0.0462	Class D: cytosol (p = 0.67)	TWD1 (TWISTED DWARF 1) FK506 BINDING / CALMODULIN BINDING / PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT2G30360	Experimental protein kinase assay biochemical in vitro	FSW = 0.0443	Unknown	SIP4 (SOS3-INTERACTING PROTEIN 4) KINASE/ PROTEIN KINASE
AT2G18960	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.7639	Class C: vacuole plasma membrane	AHA1 (ARABIDOPSIS H+ ATPASE 1) ATPASE/ HYDROGEN-EXPORTING ATPASE PHOSPHORYLATIVE MECHANISM / PROTEIN BINDING
AT5G62670	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.8276	Class C: vacuole plasma membrane	AHA11 (ARABIDOPSIS H(+)-ATPASE 11) ATPASE
AT1G80660	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.7878	Class C: vacuole	AHA9 HYDROGEN-EXPORTING ATPASE PHOSPHORYLATIVE MECHANISM
AT2G07560	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.8667	Class C: plasma membrane	AHA6 (ARABIDOPSIS H(+)-ATPASE 6) ATPASE
AT3G42640	Predicted Enriched domain pair Gene fusion method Phylogenetic profile method Co-expression	FSW = 0.7878	Class C: plasma membrane	AHA8 (ARABIDOPSIS H(+)-ATPASE 8) ATPASE
AT5G57350	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.8276	Class C: plasma membrane	AHA3 ATPASE/ HYDROGEN-EXPORTING ATPASE PHOSPHORYLATIVE MECHANISM
AT3G47950	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.7945	Class C: plasma membrane	AHA4 ATPASE/ HYDROGEN-EXPORTING ATPASE PHOSPHORYLATIVE MECHANISM
AT3G60330	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.7356	Class C: plasma membrane	AHA7 (ARABIDOPSIS H(+)-ATPASE 7) HYDROGEN-EXPORTING ATPASE PHOSPHORYLATIVE MECHANISM
AT2G24520	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.7878	Class C: plasma membrane	AHA5 (ARABIDOPSIS H(+)-ATPASE 5) ATPASE
AT1G17260	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.7356	Unknown	AHA10 (AUTOINHIBITED H(+)-ATPASE ISOFORM 10) ATPASE/ ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM / CATION-TRANSPORTING ATPASE
AT4G11730	Predicted Enriched domain pair Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.7878	Unknown	ATPASE PLASMA MEMBRANE-TYPE PUTATIVE / PROTON PUMP PUTATIVE

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

AtPIN will be upgraded. Please send your suggestions here

AT4G30190 - ( AHA2 ATPase/ hydrogen-exporting ATPase phosphorylative mechanism )

Class A:

Class B:

Class D:

Class A:

Class B:

Class D:

Class D:

Class D:

Unknown

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Unknown

Unknown

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Fasta sequences:

Quick help

FSW

C3

PEP

How to cite