Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G80370 - ( CYCA24 (Cyclin A24) cyclin-dependent protein kinase regulator )

19 Proteins interacs with AT1G80370
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G48750

Experimental

protein complementation assay

FSW = 0.0766

Unknown

CDC2 (CELL DIVISION CONTROL 2) CYCLIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING / PROTEIN KINASE
AT2G32710

Experimental

protein complementation assay

FSW = 0.2406

Unknown

KRP4 CYCLIN BINDING / CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR
AT5G48820

Experimental

two hybrid

FSW = 0.2342

Unknown

ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE) CYCLIN BINDING / CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR
AT2G23430

Experimental

fluorescence acceptor donor pair

protein complementation assay

FSW = 0.2016

Unknown

ICK1 CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR
AT1G18040

Experimental

protein complementation assay

FSW = 0.1432

Unknown

CDKD13 (CYCLIN-DEPENDENT KINASE D13) KINASE/ PROTEIN KINASE
AT3G54180

Experimental

protein complementation assay

FSW = 0.1569

Unknown

CDKB11 (CYCLIN-DEPENDENT KINASE B11) CYCLIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING
AT2G38620

Experimental

protein complementation assay

FSW = 0.3186

Unknown

CDKB12 (CYCLIN-DEPENDENT KINASE B12) CYCLIN BINDING / KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G76540

Experimental

protein complementation assay

FSW = 0.2483

Unknown

CDKB21 (CYCLIN-DEPENDENT KINASE B21) CYCLIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING
AT4G37630

Experimental

two hybrid

FSW = 0.3509

Unknown

CYCD51 (CYCLIN D51) CYCLIN-DEPENDENT PROTEIN KINASE
AT3G56310

Predicted

two hybrid

FSW = 0.0383

Unknown

ALPHA-GALACTOSIDASE PUTATIVE / MELIBIASE PUTATIVE / ALPHA-D-GALACTOSIDE GALACTOHYDROLASE PUTATIVE
AT1G43190

Predicted

two hybrid

FSW = 0.0485

Unknown

POLYPYRIMIDINE TRACT-BINDING PROTEIN PUTATIVE / HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN PUTATIVE
AT5G40820

Predicted

Phenotypic Suppression

FSW = 0.0133

Unknown

ATRAD3 BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / PROTEIN SERINE/THREONINE KINASE
AT1G44120

Predicted

Phenotypic Enhancement

FSW = 0.0921

Unknown

C2 DOMAIN-CONTAINING PROTEIN / ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN
AT3G08690

Predicted

Phenotypic Suppression

FSW = 0.0214

Unknown

UBC11 (UBIQUITIN-CONJUGATING ENZYME 11) UBIQUITIN-PROTEIN LIGASE
AT5G06150

Predicted

Phenotypic Suppression

Phenotypic Suppression

Phenotypic Suppression

Phenotypic Suppression

Phenotypic Suppression

Phenotypic Suppression

Phenotypic Enhancement

Phenotypic Enhancement

Phenotypic Enhancement

Phenotypic Enhancement

Phenotypic Enhancement

Phenotypic Enhancement

FSW = 0.0590

Unknown

CYC1BAT CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT5G37290

Predicted

two hybrid

FSW = 0.0485

Unknown

ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN
AT5G62600

Predicted

two hybrid

FSW = 0.0251

Unknown

TRANSPORTIN-SR-RELATED
AT2G44420

Predicted

two hybrid

FSW = 0.0404

Unknown

PROTEIN N-TERMINAL ASPARAGINE AMIDOHYDROLASE FAMILY PROTEIN
AT5G61980

Predicted

two hybrid

FSW = 0.0331

Unknown

AGD1 (ARF-GAP DOMAIN 1) ARF GTPASE ACTIVATOR/ PROTEIN BINDING / ZINC ION BINDING

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454