Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G02970 - ( WEE1 (ARABIDOPSIS WEE1 KINASE HOMOLOG) kinase/ protein kinase )

19 Proteins interacs with AT1G02970
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G48750

Experimental

biochemical

protein complementation assay

two hybrid

FSW = 0.0117

Unknown

CDC2 (CELL DIVISION CONTROL 2) CYCLIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING / PROTEIN KINASE
AT5G10450

Predicted

in vivo

Affinity Capture-MS

FSW = 0.0236

Unknown

GRF6 (G-BOX REGULATING FACTOR 6) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT5G65430

Predicted

Phenotypic Suppression

FSW = 0.0120

Unknown

GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT2G18040

Predicted

in vitro

in vitro

FSW = 0.0270

Unknown

PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE NIMA-INTERACTING 1) PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT5G06550

Predicted

two hybrid

two hybrid

Co-expression

FSW = 0.0606

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN CELL SURFACE RECEPTOR LINKED SIGNAL TRANSDUCTION EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 12 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CYCLIN-LIKE F-BOX (INTERPROIPR001810) TRANSCRIPTION FACTOR JUMONJI/ASPARTYL BETA-HYDROXYLASE (INTERPROIPR003347) TRANSCRIPTION FACTOR JUMONJI (INTERPROIPR013129) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS TRANSFERASE TRANSFERRING GLYCOSYL GROUPS (TAIRAT1G782801) HAS 1299 BLAST HITS TO 1289 PROTEINS IN 204 SPECIES ARCHAE - 0 BACTERIA - 195 METAZOA - 777 FUNGI - 106 PLANTS - 94 VIRUSES - 0 OTHER EUKARYOTES - 127 (SOURCE NCBI BLINK)
AT1G21190

Predicted

Phenotypic Suppression

FSW = 0.0137

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT1G29330

Predicted

Phenotypic Suppression

FSW = 0.0096

Unknown

ERD2 (ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2) KDEL SEQUENCE BINDING / RECEPTOR
AT5G40820

Predicted

Phenotypic Suppression

Phenotypic Enhancement

Phenotypic Suppression

Phenotypic Suppression

Phenotypic Enhancement

Phenotypic Enhancement

FSW = 0.0133

Unknown

ATRAD3 BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / PROTEIN SERINE/THREONINE KINASE
AT2G22370

Predicted

two hybrid

FSW = 0.0368

Unknown

UNKNOWN PROTEIN
AT4G23930

Predicted

two hybrid

FSW = 0.0652

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM EXPRESSED IN 11 PLANT STRUCTURES EXPRESSED DURING 6 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S HARPIN-INDUCED 1 (INTERPROIPR010847) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS PROLINE-RICH FAMILY PROTEIN (TAIRAT1G644501) HAS 80 BLAST HITS TO 75 PROTEINS IN 8 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 0 FUNGI - 0 PLANTS - 80 VIRUSES - 0 OTHER EUKARYOTES - 0 (SOURCE NCBI BLINK)
AT3G57870

Predicted

two hybrid

two hybrid

FSW = 0.0209

Unknown

SCE1 (SUMO CONJUGATION ENZYME 1) SUMO LIGASE
AT4G11330

Predicted

two hybrid

FSW = 0.0160

Unknown

ATMPK5 (MAP KINASE 5) MAP KINASE/ KINASE
AT3G09800

Predicted

Phenotypic Suppression

FSW = 0.0173

Unknown

PROTEIN BINDING
AT3G16840

Predicted

Affinity Capture-Western

Dosage Growth Defect

FSW = 0.0152

Unknown

ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING
AT5G44740

Predicted

biochemical

FSW = 0.0130

Unknown

POLH (Y-FAMILT DNA POLYMERASE H) DNA-DIRECTED DNA POLYMERASE
AT5G53940

Predicted

Dosage Growth Defect

FSW = 0.0580

Unknown

YIPPEE FAMILY PROTEIN
AT2G37320

Predicted

Gene fusion method

FSW = 0.1270

Unknown

PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN
AT1G06580

Predicted

Gene fusion method

FSW = 0.1159

Unknown

PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN
AT4G01030

Predicted

Gene fusion method

FSW = 0.1270

Unknown

PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN

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Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454