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AT5G10450 - ( GRF6 (G-box regulating factor 6) protein binding / protein phosphorylated amino acid binding )

108 Proteins interacs with AT5G10450

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT4G35000	Experimental two hybrid	FSW = 0.0194	Class A: plastid peroxisome Class B: vacuole unclear plasma membrane nucleus mitochondrion cytosol Class D: cytosol (p = 0.67)	APX3 (ASCORBATE PEROXIDASE 3) L-ASCORBATE PEROXIDASE
AT1G78300	Experimental	FSW = 0.0570	Class A: plasma membrane peroxisome nucleus cytosol Class B: vacuole plastid cytoskeleton Class D: cytosol (p = 0.67)	GRF2 (GENERAL REGULATORY FACTOR 2) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT3G09840	Experimental two hybrid	FSW = 0.0068	Class A: plasma membrane nucleus cytosol Class B: plastid peroxisome endoplasmic reticulum Class D: cytosol (p = 0.67)	CDC48 (CELL DIVISION CYCLE 48) ATPASE/ IDENTICAL PROTEIN BINDING
AT5G54160	Experimental far western blotting two hybrid Reconstituted Complex	FSW = 0.0093	Class A: plasma membrane nucleus cytosol Class B: plastid peroxisome Class D: peroxisome (p = 0.31) cytosol (p = 0.67)	ATOMT1 (O-METHYLTRANSFERASE 1) CAFFEATE O-METHYLTRANSFERASE/ MYRICETIN 3-O-METHYLTRANSFERASE/ QUERCETIN 3-O-METHYLTRANSFERASE
AT1G37130	Experimental two hybrid	FSW = 0.1042	Class A: plasma membrane Class B: vacuole plastid peroxisome nucleus cytosol Class D: cytosol (p = 0.67)	NIA2 (NITRATE REDUCTASE 2) NITRATE REDUCTASE (NADH)/ NITRATE REDUCTASE
AT1G71830	Experimental two hybrid confocal microscopy pull down protein kinase assay Reconstituted Complex biochemical fluorescence acceptor donor pair in vitro	FSW = 0.0270	Class A: plasma membrane Class B: unclear plastid peroxisome nucleus endoplasmic reticulum cytosol Class D: cytosol (p = 0.67)	SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1) KINASE/ TRANSMEMBRANE RECEPTOR PROTEIN SERINE/THREONINE KINASE
AT2G26300	Experimental gtpase assay	FSW = 0.0027	Class A: plasma membrane Class B: plastid peroxisome nucleus cytosol Class D: cytosol (p = 0.67)	GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1) GTP BINDING / GTPASE/ CHANNEL REGULATOR/ SIGNAL TRANSDUCER
AT5G55630	Experimental Reconstituted Complex in vitro	FSW = 0.0153	Class B: vacuole plastid plasma membrane peroxisome nucleus cytosol Class D: nucleus (p = 0.78)	ATKCO1 CALCIUM-ACTIVATED POTASSIUM CHANNEL/ ION CHANNEL/ OUTWARD RECTIFIER POTASSIUM CHANNEL
AT1G75080	Experimental pull down far western blotting two hybrid Reconstituted Complex protein complementation assay Affinity Capture-Western split-reporter assay affinity technology in vitro	FSW = 0.0994	Class D: nucleus (p = 0.78)	BZR1 (BRASSINAZOLE-RESISTANT 1) DNA BINDING / TRANSCRIPTION REGULATOR/ TRANSCRIPTION REPRESSOR
AT1G19350	Experimental two hybrid	FSW = 0.0201	Class D: nucleus (p = 0.78)	BES1 (BRI1-EMS-SUPPRESSOR 1) PROTEIN BINDING / TRANSCRIPTION FACTOR/ TRANSCRIPTION REGULATOR
AT4G37770	Experimental pull down	FSW = 0.0230	Unknown	ACS8 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE
AT5G05440	Experimental pull down	FSW = 0.0091	Unknown	UNKNOWN PROTEIN
AT4G09000	Predicted Phylogenetic profile method	FSW = 0.2074	Class C: plastid plasma membrane nucleus	14-3-3-LIKE PROTEIN GF14 CHI / GENERAL REGULATORY FACTOR 1 (GRF1)
AT3G02520	Predicted Phylogenetic profile method Co-expression	FSW = 0.0644	Class C: plastid plasma membrane	GRF7 (GENERAL REGULATORY FACTOR 7) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT5G65430	Predicted Gene fusion method Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.1147	Class C: plastid nucleus	GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT5G64270	Predicted Affinity Capture-MS	FSW = 0.0141	Class C: plastid nucleus	SPLICING FACTOR PUTATIVE
AT5G14590	Predicted two hybrid	FSW = 0.0179	Class C: plastid	ISOCITRATE DEHYDROGENASE PUTATIVE / NADP+ ISOCITRATE DEHYDROGENASE PUTATIVE
AT5G47210	Predicted two hybrid	FSW = 0.0094	Class C: plasma membrane peroxisome nucleus cytosol	NUCLEAR RNA-BINDING PROTEIN PUTATIVE
AT2G42590	Predicted Phylogenetic profile method Co-expression	FSW = 0.0700	Class C: plasma membrane peroxisome nucleus cytosol	GRF9 (GENERAL REGULATORY FACTOR 9) CALCIUM ION BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT5G38480	Predicted Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.1107	Class C: plasma membrane peroxisome cytosol	GRF3 (GENERAL REGULATORY FACTOR 3) ATP BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G35160	Predicted Phylogenetic profile method	FSW = 0.1045	Class C: plasma membrane nucleus cytosol	GF14 PHI (GF14 PROTEIN PHI CHAIN) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT3G48750	Predicted in vivo Affinity Capture-MS	FSW = 0.0118	Class C: plasma membrane nucleus cytosol	CDC2 (CELL DIVISION CONTROL 2) CYCLIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING / PROTEIN KINASE
AT1G71860	Predicted two hybrid	FSW = 0.0504	Class C: plasma membrane nucleus	PTP1 (PROTEIN TYROSINE PHOSPHATASE 1) PROTEIN TYROSINE PHOSPHATASE
AT4G36130	Predicted two hybrid	FSW = 0.0204	Class C: plasma membrane cytosol	60S RIBOSOMAL PROTEIN L8 (RPL8C)
AT5G64070	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0094	Class C: plasma membrane cytosol	PI-4KBETA1 (PHOSPHATIDYLINOSITOL 4-OH KINASE BETA1) 1-PHOSPHATIDYLINOSITOL 4-KINASE
AT3G56190	Predicted Affinity Capture-MS	FSW = 0.0390	Class C: plasma membrane	ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) BINDING / SOLUBLE NSF ATTACHMENT PROTEIN
AT3G28715	Predicted two hybrid	FSW = 0.0041	Class C: plasma membrane	H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT5G08080	Predicted two hybrid	FSW = 0.0119	Class C: plasma membrane	SYP132 (SYNTAXIN OF PLANTS 132) SNAP RECEPTOR
AT2G20190	Predicted Affinity Capture-MS	FSW = 0.0459	Class C: plasma membrane	CLASP (CLIP-ASSOCIATED PROTEIN) BINDING
AT5G15680	Predicted Affinity Capture-MS	FSW = 0.0162	Class C: plasma membrane	BINDING
AT4G36860	Predicted Affinity Capture-MS	FSW = 0.0345	Class C: plasma membrane	ZINC ION BINDING
AT5G19010	Predicted Affinity Capture-MS two hybrid Reconstituted Complex Affinity Capture-Western	FSW = 0.0192	Class C: plasma membrane	MPK16 MAP KINASE
AT5G16050	Predicted Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.1979	Class C: plasma membrane	GRF5 (GENERAL REGULATORY FACTOR 5) ATP BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT3G17750	Predicted Affinity Capture-MS	FSW = 0.0189	Class C: plasma membrane	PROTEIN KINASE FAMILY PROTEIN
AT5G45970	Predicted Affinity Capture-MS	FSW = 0.0442	Class C: plasma membrane	ARAC2 (ARABIDOPSIS RAC-LIKE 2) GTP BINDING
AT1G22300	Predicted Phylogenetic profile method Co-expression	FSW = 0.1437	Class C: plasma membrane	GRF10 (GENERAL REGULATORY FACTOR 10) ATP BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G07110	Predicted Affinity Capture-Western Affinity Capture-MS Reconstituted Complex	FSW = 0.0206	Class C: plasma membrane	F2KP (FRUCTOSE-26-BISPHOSPHATASE) FRUCTOSE-26-BISPHOSPHATE 2-PHOSPHATASE
AT5G43370	Predicted Affinity Capture-MS	FSW = 0.0481	Class C: plasma membrane	APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT5G02620	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0195	Class C: plasma membrane	ANKYRIN REPEAT FAMILY PROTEIN
AT1G20110	Predicted two hybrid	FSW = 0.0090	Class C: peroxisome	ZINC FINGER (FYVE TYPE) FAMILY PROTEIN
AT4G17020	Predicted two hybrid	FSW = 0.0046	Class C: nucleus	TRANSCRIPTION FACTOR-RELATED
AT4G19610	Predicted two hybrid	FSW = 0.0040	Class C: nucleus	RNA BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT5G57120	Predicted Affinity Capture-MS	FSW = 0.0092	Class C: nucleus	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN NUCLEOLUS EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S LISH DIMERISATION MOTIF (INTERPROIPR006594) SRP40 C-TERMINAL (INTERPROIPR007718) HAS 90949 BLAST HITS TO 45608 PROTEINS IN 1620 SPECIES ARCHAE - 300 BACTERIA - 8281 METAZOA - 37603 FUNGI - 8095 PLANTS - 3374 VIRUSES - 548 OTHER EUKARYOTES - 32748 (SOURCE NCBI BLINK)
AT5G37500	Predicted in vivo in vitro two hybrid	FSW = 0.0201	Class C: nucleus	GORK (GATED OUTWARDLY-RECTIFYING K+ CHANNEL) CYCLIC NUCLEOTIDE BINDING / INWARD RECTIFIER POTASSIUM CHANNEL/ OUTWARD RECTIFIER POTASSIUM CHANNEL
AT2G42270	Predicted Affinity Capture-MS	FSW = 0.0230	Class C: nucleus	U5 SMALL NUCLEAR RIBONUCLEOPROTEIN HELICASE PUTATIVE
AT3G52940	Predicted Affinity Capture-MS	FSW = 0.0160	Class C: nucleus	FK (FACKEL) DELTA14-STEROL REDUCTASE
AT4G16520	Predicted two hybrid	FSW = 0.0050	Class C: cytosol	ATG8F (AUTOPHAGY 8F) MICROTUBULE BINDING
AT3G08730	Predicted in vivo in vitro	FSW = 0.0245	Class C: cytosol	PK1 (PROTEIN-SERINE KINASE 1) KINASE/ PROTEIN BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT3G16050	Predicted Affinity Capture-MS	FSW = 0.0271	Class C: cytosol	A37 PROTEIN HETERODIMERIZATION
AT3G62870	Predicted synthetic growth defect	FSW = 0.0121	Unknown	60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT5G05620	Predicted two hybrid	FSW = 0.0041	Unknown	GCP2 (GAMMA-TUBULIN COMPLEX PROTEIN 2) GTP BINDING / GTPASE/ STRUCTURAL MOLECULE
AT4G22220	Predicted Affinity Capture-MS	FSW = 0.0103	Unknown	ISU1 STRUCTURAL MOLECULE
AT5G03730	Predicted two hybrid Affinity Capture-MS Affinity Capture-MS in vitro in vitro in vivo in vivo in vitro in vivo in vitro in vitro in vivo in vitro in vivo in vivo Phenotypic Enhancement Phenotypic Enhancement Phenotypic Enhancement Phenotypic Enhancement Phenotypic Suppression Phenotypic Enhancement Phenotypic Enhancement in vivo two hybrid in vitro Affinity Capture-MS Affinity Capture-Western far western blotting Reconstituted Complex	FSW = 0.0425	Unknown	CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1) KINASE/ PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE/TYROSINE KINASE
AT3G52580	Predicted Affinity Capture-MS	FSW = 0.0410	Unknown	40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT3G03000	Predicted Affinity Capture-MS	FSW = 0.0085	Unknown	CALMODULIN PUTATIVE
AT5G56710	Predicted Affinity Capture-MS	FSW = 0.0073	Unknown	60S RIBOSOMAL PROTEIN L31 (RPL31C)
AT5G24520	Predicted Affinity Capture-MS	FSW = 0.0202	Unknown	TTG1 (TRANSPARENT TESTA GLABRA 1) DNA BINDING / NUCLEOTIDE BINDING / PROTEIN BINDING
AT5G53360	Predicted two hybrid	FSW = 0.0109	Unknown	SEVEN IN ABSENTIA (SINA) FAMILY PROTEIN
AT5G47880	Predicted Affinity Capture-MS	FSW = 0.0523	Unknown	ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) TRANSLATION RELEASE FACTOR
AT2G29900	Predicted Phenotypic Enhancement	FSW = 0.0204	Unknown	PRESENILIN FAMILY PROTEIN
AT3G48470	Predicted Phenotypic Enhancement	FSW = 0.0077	Unknown	EMB2423 (EMBRYO DEFECTIVE 2423)
AT3G12280	Predicted Phenotypic Enhancement	FSW = 0.0212	Unknown	RBR1 (RETINOBLASTOMA-RELATED 1) TRANSCRIPTION FACTOR BINDING
AT3G16320	Predicted two hybrid	FSW = 0.0218	Unknown	CDC27A BINDING
AT3G27530	Predicted two hybrid	FSW = 0.0043	Unknown	GC6 (GOLGIN CANDIDATE 6) BINDING / PROTEIN TRANSPORTER
AT3G48150	Predicted two hybrid	FSW = 0.0325	Unknown	APC8 (ANAPHASE-PROMOTING COMPLEX SUBUNIT 8) BINDING
AT5G01800	Predicted two hybrid	FSW = 0.0206	Unknown	SAPOSIN B DOMAIN-CONTAINING PROTEIN
AT5G45330	Predicted two hybrid	FSW = 0.0192	Unknown	UNKNOWN PROTEIN
AT5G61070	Predicted Affinity Capture-Western two hybrid two hybrid Affinity Capture-Western Affinity Capture-MS Reconstituted Complex	FSW = 0.0080	Unknown	HDA18 H3/H4 HISTONE ACETYLTRANSFERASE/ HISTONE DEACETYLASE
AT5G24510	Predicted two hybrid	FSW = 0.0075	Unknown	60S ACIDIC RIBOSOMAL PROTEIN P1 PUTATIVE
AT5G56580	Predicted Phenotypic Enhancement	FSW = 0.0497	Unknown	MKK6 (MAP KINASE KINASE 6) MAP KINASE KINASE/ KINASE
AT1G02970	Predicted in vivo Affinity Capture-MS	FSW = 0.0236	Unknown	WEE1 (ARABIDOPSIS WEE1 KINASE HOMOLOG) KINASE/ PROTEIN KINASE
AT1G26520	Predicted Affinity Capture-MS	FSW = 0.0240	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S COBALAMIN (VITAMIN B12) BIOSYNTHESIS COBW-LIKE (INTERPROIPR003495) COBALAMIN (VITAMIN B12) BIOSYNTHESIS COBW-LIKE C-TERMINAL (INTERPROIPR011629) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS PRLI-INTERACTING FACTOR L PUTATIVE (TAIRAT1G157301) HAS 5407 BLAST HITS TO 5334 PROTEINS IN 932 SPECIES ARCHAE - 52 BACTERIA - 3259 METAZOA - 131 FUNGI - 175 PLANTS - 131 VIRUSES - 0 OTHER EUKARYOTES - 1659 (SOURCE NCBI BLINK)
AT1G49040	Predicted Affinity Capture-MS	FSW = 0.0206	Unknown	SCD1 (STOMATAL CYTOKINESIS-DEFECTIVE 1) PROTEIN BINDING
AT1G57860	Predicted Affinity Capture-MS	FSW = 0.0085	Unknown	60S RIBOSOMAL PROTEIN L21
AT1G59520	Predicted Affinity Capture-MS	FSW = 0.0360	Unknown	CW7
AT1G68200	Predicted in vitro in vivo two hybrid Affinity Capture-MS	FSW = 0.0195	Unknown	ZINC FINGER (CCCH-TYPE) FAMILY PROTEIN
AT2G03150	Predicted Affinity Capture-Western	FSW = 0.0288	Unknown	EMB1579 (EMBRYO DEFECTIVE 1579) BINDING / CALCIUM ION BINDING
AT2G35110	Predicted Affinity Capture-MS	FSW = 0.0548	Unknown	GRL (GNARLED) TRANSCRIPTION ACTIVATOR
AT2G41760	Predicted two hybrid	FSW = 0.0090	Unknown	UNKNOWN PROTEIN
AT3G06483	Predicted in vivo in vitro	FSW = 0.0158	Unknown	PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE
AT3G14890	Predicted Affinity Capture-MS	FSW = 0.0111	Unknown	PHOSPHOESTERASE
AT3G21070	Predicted Affinity Capture-MS	FSW = 0.0230	Unknown	NADK1 (NAD KINASE 1) NAD+ KINASE/ NADH KINASE/ CALMODULIN BINDING
AT4G00660	Predicted Affinity Capture-MS	FSW = 0.0105	Unknown	DEAD/DEAH BOX HELICASE PUTATIVE
AT4G02430	Predicted Affinity Capture-MS	FSW = 0.0153	Unknown	PRE-MRNA SPLICING FACTOR PUTATIVE / SR1 PROTEIN PUTATIVE
AT4G12460	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0053	Unknown	ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B) OXYSTEROL BINDING
AT4G15180	Predicted Affinity Capture-MS	FSW = 0.0288	Unknown	SDG2 (SET DOMAIN-CONTAINING PROTEIN 2)
AT4G34110	Predicted Affinity Capture-MS	FSW = 0.0041	Unknown	PAB2 (POLY(A) BINDING 2) RNA BINDING / TRANSLATION INITIATION FACTOR
AT5G03760	Predicted Affinity Capture-MS	FSW = 0.0131	Unknown	ATCSLA09 MANNAN SYNTHASE/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT5G04510	Predicted in vivo in vitro	FSW = 0.0429	Unknown	PDK1 (3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1) 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE/ KINASE/ PHOSPHOINOSITIDE BINDING / PROTEIN BINDING / PROTEIN KINASE
AT5G14240	Predicted in vitro	FSW = 0.0096	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S THIOREDOXIN FOLD (INTERPROIPR012335) PHOSDUCIN (INTERPROIPR001200) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) HAS 750 BLAST HITS TO 750 PROTEINS IN 282 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 486 FUNGI - 126 PLANTS - 51 VIRUSES - 0 OTHER EUKARYOTES - 85 (SOURCE NCBI BLINK)
AT5G21274	Predicted Affinity Capture-MS in vitro two hybrid	FSW = 0.0036	Unknown	CAM6 (CALMODULIN 6) CALCIUM ION BINDING
AT5G37590	Predicted Affinity Capture-MS in vivo in vitro Affinity Capture-MS	FSW = 0.0085	Unknown	BINDING
AT5G58970	Predicted Affinity Capture-MS in vitro in vivo	FSW = 0.0093	Unknown	ATUCP2 (UNCOUPLING PROTEIN 2) OXIDATIVE PHOSPHORYLATION UNCOUPLER
AT5G16750	Predicted two hybrid	FSW = 0.0100	Unknown	TOZ (TORMOZEMBRYO DEFECTIVE) NUCLEOTIDE BINDING
AT5G17440	Predicted Affinity Capture-MS	FSW = 0.0179	Unknown	LUC7 N_TERMINUS DOMAIN-CONTAINING PROTEIN
AT5G21160	Predicted Affinity Capture-MS	FSW = 0.0189	Unknown	LA DOMAIN-CONTAINING PROTEIN / PROLINE-RICH FAMILY PROTEIN
AT5G22400	Predicted in vitro	FSW = 0.0768	Unknown	RAC GTPASE ACTIVATING PROTEIN PUTATIVE
AT5G39500	Predicted Affinity Capture-MS	FSW = 0.0063	Unknown	PATTERN FORMATION PROTEIN PUTATIVE
AT5G57610	Predicted two hybrid Affinity Capture-MS	FSW = 0.0418	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT5G67380	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0106	Unknown	CKA1 (CASEIN KINASE ALPHA 1) KINASE
AT1G76720	Predicted Affinity Capture-MS	FSW = 0.0487	Unknown	GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR
AT3G12690	Predicted Affinity Capture-MS	FSW = 0.0449	Unknown	AGC15 (AGC KINASE 15) KINASE
AT3G18660	Predicted Affinity Capture-MS	FSW = 0.0097	Unknown	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT4G17770	Predicted Affinity Capture-MS	FSW = 0.0438	Unknown	ATTPS5 PROTEIN BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT1G26480	Predicted Phylogenetic profile method Co-expression	FSW = 0.2268	Unknown	GRF12 (GENERAL REGULATORY FACTOR 12) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G78220	Predicted Phylogenetic profile method Co-expression	FSW = 0.2276	Unknown	GRF13 PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G34760	Predicted Phylogenetic profile method Co-expression	FSW = 0.1723	Unknown	GRF11 (GENERAL REGULATORY FACTOR 11) ATPASE BINDING / AMINO ACID BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G22290	Predicted Phylogenetic profile method	FSW = 0.0227	Unknown	14-3-3 PROTEIN GF14 PUTATIVE (GRF10)

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT5G10450 - ( GRF6 (G-box regulating factor 6) protein binding / protein phosphorylated amino acid binding )

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