Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT3G16050 - ( A37 protein heterodimerization )
137 Proteins interacs with AT3G16050| Locus | Method | FSW  | Cellular Compartment Classification (C3) | Description |
|---|---|---|---|---|
AT5G01410
   | Experimentaltwo hybridpull down | FSW = 0.0134
| Class A:cytosolClass B:plastidplasma membranenucleusClass D:mitochondrion (p = 0.82)cytosol (p = 0.67) | RSR4 (REDUCED SUGAR RESPONSE 4) PROTEIN HETERODIMERIZATION/ PROTEIN HOMODIMERIZATION |
| AT2G38230
| Experimentalpull down | FSW = 0.0262
| Class A:cytosolClass D:mitochondrion (p = 0.82)cytosol (p = 0.67) | ATPDX11 (PYRIDOXINE BIOSYNTHESIS 11) PROTEIN HETERODIMERIZATION |
| AT5G10450
| PredictedAffinity Capture-MS | FSW = 0.0271
| Class C:cytosol | GRF6 (G-BOX REGULATING FACTOR 6) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING |
| AT5G60390
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2521
| Class C:cytosol | ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA |
| AT2G21540
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.4977
| Class C:cytosol | SFH3 (SEC14-LIKE 3) PHOSPHATIDYLINOSITOL TRANSPORTER |
| AT1G11250
| PredictedAffinity Capture-MS | FSW = 0.2228
| Class C:cytosol | SYP125 (SYNTAXIN OF PLANTS 125) SNAP RECEPTOR |
| AT1G55690
| PredictedAffinity Capture-MS | FSW = 0.0781
| Class C:cytosol | SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN |
| AT4G35640
| PredictedAffinity Capture-MS | FSW = 0.0605
| Class C:cytosol | ATSERAT32 (SERINE ACETYLTRANSFERASE 32) ACETYLTRANSFERASE/ SERINE O-ACETYLTRANSFERASE |
| AT3G08730
| PredictedAffinity Capture-MS | FSW = 0.2421
| Class C:cytosol | PK1 (PROTEIN-SERINE KINASE 1) KINASE/ PROTEIN BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
| AT5G47720
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0910
| Class C:cytosol | ACETYL-COA C-ACYLTRANSFERASE PUTATIVE / 3-KETOACYL-COA THIOLASE PUTATIVE |
| AT3G01280
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0955
| Unknown | VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1) VOLTAGE-GATED ANION CHANNEL |
| AT2G01250
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2179
| Unknown | 60S RIBOSOMAL PROTEIN L7 (RPL7B) |
| AT3G12580
| PredictedAffinity Capture-MS | FSW = 0.1525
| Unknown | HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING |
| AT2G20450
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.3738
| Unknown | 60S RIBOSOMAL PROTEIN L14 (RPL14A) |
| AT3G56190
| PredictedAffinity Capture-MS | FSW = 0.1867
| Unknown | ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) BINDING / SOLUBLE NSF ATTACHMENT PROTEIN |
| AT1G22780
| PredictedAffinity Capture-MS | FSW = 0.2645
| Unknown | PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME |
| AT1G07930 | PredictedAffinity Capture-MS | FSW = 0.2647
| Unknown | ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA |
| AT5G24780
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3590
| Unknown | VSP1 (VEGETATIVE STORAGE PROTEIN 1) ACID PHOSPHATASE/ TRANSCRIPTION FACTOR BINDING |
| AT3G62870
| Predictedtwo hybrid | FSW = 0.0586
| Unknown | 60S RIBOSOMAL PROTEIN L7A (RPL7AB) |
| AT3G20390
| PredictedAffinity Capture-MS | FSW = 0.1994
| Unknown | ENDORIBONUCLEASE L-PSP FAMILY PROTEIN |
| AT2G29990
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.4610
| Unknown | NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2) FAD BINDING / NADH DEHYDROGENASE/ OXIDOREDUCTASE |
| AT2G19860
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3655
| Unknown | HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE |
| AT1G15210
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.3617
| Unknown | PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES |
| AT5G24400
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.3009
| Unknown | EMB2024 (EMBRYO DEFECTIVE 2024) 6-PHOSPHOGLUCONOLACTONASE/ CATALYTIC |
| AT2G31170
| PredictedAffinity Capture-MS | FSW = 0.3111
| Unknown | SYCO ARATH ATP BINDING / AMINOACYL-TRNA LIGASE/ CYSTEINE-TRNA LIGASE/ NUCLEOTIDE BINDING |
| AT4G26970
| PredictedAffinity Capture-MS | FSW = 0.4473
| Unknown | ACONITATE HYDRATASE/ COPPER ION BINDING |
| AT1G51040
| PredictedAffinity Capture-MS | FSW = 0.2014
| Unknown | PHOSPHATIDYLINOSITOL 4-KINASE PUTATIVE |
| AT1G19660
| PredictedSynthetic Lethality | FSW = 0.0253
| Unknown | WOUND-RESPONSIVE FAMILY PROTEIN |
| AT5G61410
| PredictedAffinity Capture-MS | FSW = 0.0215
| Unknown | RPE CATALYTIC/ RIBULOSE-PHOSPHATE 3-EPIMERASE |
| AT5G13050
| PredictedAffinity Capture-MS | FSW = 0.2795
| Unknown | 5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE |
| AT4G23430
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3243
| Unknown | SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN |
| AT5G45420
| PredictedAffinity Capture-MS | FSW = 0.2317
| Unknown | MYB FAMILY TRANSCRIPTION FACTOR |
| AT1G27970
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.4808
| Unknown | NTF2B (NUCLEAR TRANSPORT FACTOR 2B) RAN GTPASE BINDING / PROTEIN TRANSPORTER |
| AT1G75840
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.2398
| Unknown | ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5) GTP BINDING / GTPASE |
| AT3G61430
| PredictedAffinity Capture-MS | FSW = 0.1863
| Unknown | PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A) WATER CHANNEL |
| AT1G20760
| PredictedAffinity Capture-MS | FSW = 0.1822
| Unknown | CALCIUM-BINDING EF HAND FAMILY PROTEIN |
| AT1G70490 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.1823
| Unknown | ARFA1D GTP BINDING / PHOSPHOLIPASE ACTIVATOR/ PROTEIN BINDING |
| AT1G50310
| PredictedAffinity Capture-MS | FSW = 0.1865
| Unknown | STP9 (SUGAR TRANSPORTER 9) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER |
| AT4G22120
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.4123
| Unknown | EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED |
| AT2G20580
| PredictedAffinity Capture-MS | FSW = 0.0592
| Unknown | RPN1A (26S PROTEASOME REGULATORY SUBUNIT S2 1A) BINDING / ENZYME REGULATOR |
| AT1G09640
| PredictedAffinity Capture-MS | FSW = 0.2968
| Unknown | ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE |
| AT5G59950
| PredictedAffinity Capture-MS | FSW = 0.1097
| Unknown | RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE |
| AT2G35690
| PredictedAffinity Capture-MS | FSW = 0.2196
| Unknown | ACX5 (ACYL-COA OXIDASE 5) FAD BINDING / ACYL-COA DEHYDROGENASE/ ACYL-COA OXIDASE/ ELECTRON CARRIER/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-CH GROUP OF DONORS |
| AT4G29390 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.0436
| Unknown | 40S RIBOSOMAL PROTEIN S30 (RPS30B) |
| AT2G47640
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.1538
| Unknown | SMALL NUCLEAR RIBONUCLEOPROTEIN D2 PUTATIVE / SNRNP CORE PROTEIN D2 PUTATIVE / SM PROTEIN D2 PUTATIVE |
| AT4G26600
| PredictedAffinity Capture-MS | FSW = 0.1404
| Unknown | NUCLEOLAR PROTEIN PUTATIVE |
| AT5G59870
| PredictedAffinity Capture-MS | FSW = 0.2536
| Unknown | HTA6 DNA BINDING |
| AT2G23460
| PredictedAffinity Capture-MS | FSW = 0.0833
| Unknown | XLG1 (EXTRA-LARGE G-PROTEIN 1) GUANYL NUCLEOTIDE BINDING / SIGNAL TRANSDUCER |
| AT2G37470
| PredictedAffinity Capture-MS | FSW = 0.2898
| Unknown | HISTONE H2B PUTATIVE |
| AT3G61530
| PredictedAffinity Capture-MS | FSW = 0.0318
| Unknown | PANB2 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE |
| AT1G72330
| PredictedAffinity Capture-MS | FSW = 0.0792
| Unknown | ALAAT2 (ALANINE AMINOTRANSFERASE 2) ATP BINDING / L-ALANINE2-OXOGLUTARATE AMINOTRANSFERASE |
| AT3G10920
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.3227
| Unknown | MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1) METAL ION BINDING / SUPEROXIDE DISMUTASE |
| AT1G72480
| PredictedAffinity Capture-MS | FSW = 0.3488
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN GOLGI APPARATUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G010701) HAS 422 BLAST HITS TO 420 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 208 FUNGI - 101 PLANTS - 83 VIRUSES - 0 OTHER EUKARYOTES - 30 (SOURCE NCBI BLINK) |
| AT2G13650
| PredictedAffinity Capture-MS | FSW = 0.2781
| Unknown | GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER |
| AT4G33710
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.2446
| Unknown | PATHOGENESIS-RELATED PROTEIN PUTATIVE |
| AT2G14580
| PredictedSynthetic Lethality | FSW = 0.0463
| Unknown | ATPRB1 |
| AT5G57625
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3825
| Unknown | ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN |
| AT4G33720
| PredictedAffinity Capture-MS | FSW = 0.0846
| Unknown | PATHOGENESIS-RELATED PROTEIN PUTATIVE |
| AT1G76400
| PredictedAffinity Capture-MS | FSW = 0.0781
| Unknown | RIBOPHORIN I FAMILY PROTEIN |
| AT3G12530
| PredictedAffinity Capture-MS | FSW = 0.2869
| Unknown | PSF2 |
| AT4G03210
| PredictedAffinity Capture-MS | FSW = 0.0074
| Unknown | XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9) HYDROLASE ACTING ON GLYCOSYL BONDS / XYLOGLUCANXYLOGLUCOSYL TRANSFERASE |
| AT2G24040
| PredictedAffinity Capture-MS | FSW = 0.2674
| Unknown | HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE |
| AT1G01140
| PredictedAffinity Capture-MS | FSW = 0.0134
| Unknown | CIPK9 (CBL-INTERACTING PROTEIN KINASE 9) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
| AT1G10280
| PredictedAffinity Capture-MS | FSW = 0.0487
| Unknown | UNKNOWN PROTEIN |
| AT1G11530
| PredictedAffinity Capture-MS | FSW = 0.2359
| Unknown | ATCXXS1 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1) PROTEIN DISULFIDE ISOMERASE |
| AT1G20696
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2667
| Unknown | HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR |
| AT1G24706
| PredictedAffinity Capture-MS | FSW = 0.3727
| Unknown | UNKNOWN PROTEIN |
| AT1G26480
| PredictedAffinity Capture-MS | FSW = 0.0855
| Unknown | GRF12 (GENERAL REGULATORY FACTOR 12) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING |
| AT1G51770
| PredictedAffinity Capture-MS | FSW = 0.3499
| Unknown | UNKNOWN PROTEIN |
| AT1G54290
| PredictedAffinity Capture-MS | FSW = 0.1047
| Unknown | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE |
| AT1G58520
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3633
| Unknown | HYDROLASE ACTING ON ESTER BONDS / LIPASE |
| AT1G62880
| PredictedAffinity Capture-MS | FSW = 0.2996
| Unknown | CORNICHON FAMILY PROTEIN |
| AT1G69880
| PredictedAffinity Capture-MS | FSW = 0.0284
| Unknown | ATH8 (THIOREDOXIN H-TYPE 8) |
| AT1G76720
| PredictedAffinity Capture-MS | FSW = 0.2769
| Unknown | GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR |
| AT2G01770
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.3833
| Unknown | VIT1 (VACUOLAR IRON TRANSPORTER 1) IRON ION TRANSMEMBRANE TRANSPORTER |
| AT2G03040
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.2624
| Unknown | TRANSMEMBRANE PROTEIN-RELATED |
| AT2G03410
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.2388
| Unknown | MO25 FAMILY PROTEIN |
| AT2G03667
| PredictedAffinity Capture-MS | FSW = 0.2434
| Unknown | ASPARAGINE SYNTHASE (GLUTAMINE-HYDROLYZING) |
| AT2G16090
| PredictedAffinity Capture-MS | FSW = 0.1373
| Unknown | ZINC FINGER PROTEIN-RELATED |
| AT2G16740
| PredictedAffinity Capture-MS | FSW = 0.2848
| Unknown | UBC29 (UBIQUITIN-CONJUGATING ENZYME 29) UBIQUITIN-PROTEIN LIGASE |
| AT2G19570
| PredictedAffinity Capture-MS | FSW = 0.0213
| Unknown | CDA1 (CYTIDINE DEAMINASE 1) CYTIDINE DEAMINASE |
| AT2G19910
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.5111
| Unknown | RNA-DEPENDENT RNA POLYMERASE FAMILY PROTEIN |
| AT2G31260
| PredictedAffinity Capture-MS | FSW = 0.0144
| Unknown | APG9 (AUTOPHAGY 9) |
| AT2G34250
| PredictedAffinity Capture-MS | FSW = 0.2403
| Unknown | PROTEIN TRANSPORT PROTEIN SEC61 PUTATIVE |
| AT2G35390
| PredictedAffinity Capture-MS | FSW = 0.1049
| Unknown | RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1 / PHOSPHORIBOSYL DIPHOSPHATE SYNTHETASE 1 (PRSI) |
| AT2G37760
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2487
| Unknown | ALDO/KETO REDUCTASE FAMILY PROTEIN |
| AT2G41530
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.4619
| Unknown | SFGH (S-FORMYLGLUTATHIONE HYDROLASE) S-FORMYLGLUTATHIONE HYDROLASE/ HYDROLASE ACTING ON ESTER BONDS |
| AT2G42160
| PredictedAffinity Capture-MS | FSW = 0.1038
| Unknown | ZINC FINGER (UBIQUITIN-HYDROLASE) DOMAIN-CONTAINING PROTEIN |
| AT2G43360
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.5441
| Unknown | BIO2 (BIOTIN AUXOTROPH 2) BIOTIN SYNTHASE |
| AT2G45080
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.2077
| Unknown | CYCP31 (CYCLIN P31) CYCLIN-DEPENDENT PROTEIN KINASE |
| AT2G46860
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.4987
| Unknown | ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE |
| AT2G47570
| PredictedAffinity Capture-MS | FSW = 0.3183
| Unknown | 60S RIBOSOMAL PROTEIN L18 (RPL18A) |
| AT3G03180
| PredictedAffinity Capture-MS | FSW = 0.0106
| Unknown | GOT1-LIKE FAMILY PROTEIN |
| AT3G04710
| PredictedAffinity Capture-MS | FSW = 0.0272
| Unknown | ANKYRIN REPEAT FAMILY PROTEIN |
| AT3G05540
| PredictedAffinity Capture-MS | FSW = 0.1090
| Unknown | INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CYTOPLASM CONTAINS INTERPRO DOMAIN/S TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN (INTERPROIPR018105) TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR001983) MSS4/TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR011323) TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN CONSERVED SITE (INTERPROIPR018103) MSS4-LIKE (INTERPROIPR011057) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) (TAIRAT3G166401) HAS 640 BLAST HITS TO 640 PROTEINS IN 231 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 343 FUNGI - 110 PLANTS - 105 VIRUSES - 0 OTHER EUKARYOTES - 82 (SOURCE NCBI BLINK) |
| AT3G11900
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.4213
| Unknown | ANT1 (AROMATIC AND NEUTRAL TRANSPORTER 1) AMINO ACID TRANSMEMBRANE TRANSPORTER/ AROMATIC AMINO ACID TRANSMEMBRANE TRANSPORTER/ NEUTRAL AMINO ACID TRANSMEMBRANE TRANSPORTER |
| AT3G12690
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3387
| Unknown | AGC15 (AGC KINASE 15) KINASE |
| AT1G78290
| PredictedAffinity Capture-MS | FSW = 0.3631
| Unknown | SERINE/THREONINE PROTEIN KINASE PUTATIVE |
| AT2G27340
| PredictedAffinity Capture-MS | FSW = 0.0689
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN CONTAINS INTERPRO DOMAIN/S N-ACETYLGLUCOSAMINYL PHOSPHATIDYLINOSITOL DEACETYLASE (INTERPROIPR003737) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED (TAIRAT3G581302) HAS 325 BLAST HITS TO 323 PROTEINS IN 156 SPECIES ARCHAE - 0 BACTERIA - 42 METAZOA - 92 FUNGI - 108 PLANTS - 28 VIRUSES - 0 OTHER EUKARYOTES - 55 (SOURCE NCBI BLINK) |
| AT3G18850
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.2492
| Unknown | LPAT5 ACYLTRANSFERASE |
| AT3G49880
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.3898
| Unknown | GLYCOSYL HYDROLASE FAMILY PROTEIN 43 |
| AT3G51880
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.3664
| Unknown | HMGB1 (HIGH MOBILITY GROUP B 1) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR |
| AT3G59410
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.4959
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
| AT4G19645
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.2735
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN INTEGRAL TO MEMBRANE CONTAINS INTERPRO DOMAIN/S TRAM LAG1 AND CLN8 HOMOLOGY (INTERPROIPR006634) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G313002) HAS 401 BLAST HITS TO 401 PROTEINS IN 98 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 186 FUNGI - 102 PLANTS - 84 VIRUSES - 0 OTHER EUKARYOTES - 29 (SOURCE NCBI BLINK) |
| AT4G35620
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.4219
| Unknown | CYCB22 (CYCLIN B22) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR |
| AT5G19150
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.4531
| Unknown | CARBOHYDRATE KINASE FAMILY |
| AT3G20650
| PredictedAffinity Capture-MS | FSW = 0.3039
| Unknown | MRNA CAPPING ENZYME FAMILY PROTEIN |
| AT3G23570
| PredictedAffinity Capture-MS | FSW = 0.2538
| Unknown | DIENELACTONE HYDROLASE FAMILY PROTEIN |
| AT3G30842
| PredictedAffinity Capture-MS | FSW = 0.3638
| Unknown | PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING |
| AT3G47940
| PredictedAffinity Capture-MS | FSW = 0.0614
| Unknown | DNAJ HEAT SHOCK PROTEIN PUTATIVE |
| AT3G52560
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.0914
| Unknown | UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE |
| AT3G53510
| PredictedAffinity Capture-MS | FSW = 0.1362
| Unknown | ABC TRANSPORTER FAMILY PROTEIN |
| AT3G53730
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.4549
| Unknown | HISTONE H4 |
| AT3G54150
| PredictedAffinity Capture-MS | FSW = 0.1590
| Unknown | EMBRYO-ABUNDANT PROTEIN-RELATED |
| AT3G55280
| PredictedAffinity Capture-MS | FSW = 0.0143
| Unknown | RPL23AB (RIBOSOMAL PROTEIN L23AB) RNA BINDING / NUCLEOTIDE BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME |
| AT3G59790
| PredictedAffinity Capture-MS | FSW = 0.0225
| Unknown | ATMPK10 MAP KINASE/ KINASE |
| AT3G62770
| PredictedAffinity Capture-MS | FSW = 0.2518
| Unknown | ATATG18A |
| AT4G12440
| PredictedAffinity Capture-MS | FSW = 0.0291
| Unknown | ADENINE PHOSPHORIBOSYLTRANSFERASE PUTATIVE |
| AT4G17380
| PredictedAffinity Capture-MS | FSW = 0.2237
| Unknown | MSH4 (MUTS HOMOLOG 4) ATP BINDING / DAMAGED DNA BINDING / MISMATCHED DNA BINDING |
| AT4G17770
| PredictedAffinity Capture-MS | FSW = 0.2442
| Unknown | ATTPS5 PROTEIN BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE |
| AT4G25860
| PredictedAffinity Capture-MS | FSW = 0.3606
| Unknown | ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A) OXYSTEROL BINDING |
| AT4G26810
| PredictedAffinity Capture-MS | FSW = 0.2553
| Unknown | SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN |
| AT4G29140
| PredictedAffinity Capture-MS | FSW = 0.0206
| Unknown | MATE EFFLUX PROTEIN-RELATED |
| AT4G32850
| PredictedAffinity Capture-MS | FSW = 0.0208
| Unknown | NPAP (NUCLEAR POLY(A) POLYMERASE) NUCLEOTIDYLTRANSFERASE/ PROTEIN BINDING |
| AT5G02230
| PredictedAffinity Capture-MS | FSW = 0.0262
| Unknown | HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN |
| AT5G06420
| PredictedAffinity Capture-MS | FSW = 0.2190
| Unknown | ZINC FINGER (CCCH-TYPE/C3HC4-TYPE RING FINGER) FAMILY PROTEIN |
| AT5G09630
| PredictedAffinity Capture-MS | FSW = 0.2735
| Unknown | PROTEIN BINDING / ZINC ION BINDING |
| AT5G16750
| PredictedAffinity Capture-MS | FSW = 0.1152
| Unknown | TOZ (TORMOZEMBRYO DEFECTIVE) NUCLEOTIDE BINDING |
| AT5G17000
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3163
| Unknown | NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE |
| AT5G19820
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.4508
| Unknown | EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE |
| AT5G20060
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3464
| Unknown | PHOSPHOLIPASE/CARBOXYLESTERASE FAMILY PROTEIN |
| AT5G24840
| PredictedAffinity Capture-MS | FSW = 0.0258
| Unknown | TRNA (GUANINE-N7-)-METHYLTRANSFERASE |
| AT5G27640
| PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.3707
| Unknown | TIF3B1 (TRANSLATION INITIATION FACTOR 3B1) NUCLEIC ACID BINDING / TRANSLATION INITIATION FACTOR |
| AT5G37850
| PredictedAffinity Capture-MS | FSW = 0.1017
| Unknown | SOS4 (SALT OVERLY SENSITIVE 4) KINASE/ PYRIDOXAL KINASE |
| AT5G54200
| PredictedAffinity Capture-MS | FSW = 0.2083
| Unknown | WD-40 REPEAT FAMILY PROTEIN |
| AT5G57890
| PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2979
| Unknown | ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE |
| AT5G67380
| PredictedAffinity Capture-MS | FSW = 0.1113
| Unknown | CKA1 (CASEIN KINASE ALPHA 1) KINASE |
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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
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