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AT1G09640 - ( elongation factor 1B-gamma putative / eEF-1B gamma putative )

108 Proteins interacs with AT1G09640

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT1G07920	Predicted Affinity Capture-MS	FSW = 0.0399	Class C: plasma membrane	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT2G20450	Predicted Affinity Capture-MS	FSW = 0.4499	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT3G08710	Predicted Affinity Capture-MS	FSW = 0.1012	Class C: plasma membrane	ATH9 (THIOREDOXIN H-TYPE 9)
AT1G22780	Predicted Affinity Capture-MS	FSW = 0.5292	Class C: plasma membrane	PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G15210	Predicted Affinity Capture-MS	FSW = 0.5569	Class C: plasma membrane	PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT5G60390	Predicted Affinity Capture-MS	FSW = 0.4298	Class C: plasma membrane	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT5G23740	Predicted Affinity Capture-MS	FSW = 0.4853	Class C: plasma membrane	RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G27970	Predicted Affinity Capture-MS	FSW = 0.4984	Class C: plasma membrane	NTF2B (NUCLEAR TRANSPORT FACTOR 2B) RAN GTPASE BINDING / PROTEIN TRANSPORTER
AT5G52640	Predicted Affinity Capture-MS	FSW = 0.0100	Class C: plasma membrane	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT1G09620	Predicted in vivo in vitro	FSW = 0.0096	Class C: plasma membrane	ATP BINDING / AMINOACYL-TRNA LIGASE/ LEUCINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT5G62300	Predicted Affinity Capture-MS	FSW = 0.3766	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT1G04810	Predicted Affinity Capture-MS	FSW = 0.0138	Class C: plasma membrane	26S PROTEASOME REGULATORY SUBUNIT PUTATIVE
AT1G30230	Predicted two hybrid Affinity Capture-MS Affinity Capture-MS	FSW = 0.0842	Class C: plasma membrane	ELONGATION FACTOR 1-BETA / EF-1-BETA
AT4G36860	Predicted Affinity Capture-MS	FSW = 0.5243	Class C: plasma membrane	ZINC ION BINDING
AT1G57720	Predicted Enriched domain pair Gene neighbors method Phylogenetic profile method	FSW = 0.2297	Class C: plasma membrane	ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE
AT5G43370	Predicted Affinity Capture-MS	FSW = 0.5316	Class C: plasma membrane	APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT4G22120	Predicted Affinity Capture-MS	FSW = 0.1908	Class C: plasma membrane	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT1G20970	Predicted Affinity Capture-MS	FSW = 0.0089	Class C: plasma membrane	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN PLASMA MEMBRANE VACUOLE EXPRESSED IN GUARD CELL CULTURED CELL BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS PPI1 (PROTON PUMP INTERACTOR 1) PROTEIN BINDING (TAIRAT4G275001) HAS 53409 BLAST HITS TO 33585 PROTEINS IN 1572 SPECIES ARCHAE - 464 BACTERIA - 7066 METAZOA - 25076 FUNGI - 5173 PLANTS - 1740 VIRUSES - 257 OTHER EUKARYOTES - 13633 (SOURCE NCBI BLINK)
AT4G32470	Predicted Affinity Capture-MS	FSW = 0.5882	Unknown	UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE
AT1G07930	Predicted Affinity Capture-MS	FSW = 0.5475	Unknown	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT1G31780	Predicted Affinity Capture-MS	FSW = 0.0146	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CONSERVED OLIGOMERIC COMPLEX COG6 (INTERPROIPR010490) HAS 281 BLAST HITS TO 279 PROTEINS IN 131 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 132 FUNGI - 106 PLANTS - 21 VIRUSES - 0 OTHER EUKARYOTES - 20 (SOURCE NCBI BLINK)
AT5G50440	Predicted two hybrid	FSW = 0.0195	Unknown	MEMB12 (MEMBRIN 12) SNAP RECEPTOR
AT2G36900	Predicted two hybrid	FSW = 0.0194	Unknown	MEMB11 (MEMBRIN 11) SNAP RECEPTOR
AT2G29990	Predicted Affinity Capture-MS	FSW = 0.1330	Unknown	NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2) FAD BINDING / NADH DEHYDROGENASE/ OXIDOREDUCTASE
AT2G19860	Predicted Affinity Capture-MS	FSW = 0.4857	Unknown	HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT3G08950	Predicted Affinity Capture-MS	FSW = 0.5437	Unknown	ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN
AT3G19980	Predicted Affinity Capture-MS	FSW = 0.4344	Unknown	ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT5G24400	Predicted Affinity Capture-MS	FSW = 0.2154	Unknown	EMB2024 (EMBRYO DEFECTIVE 2024) 6-PHOSPHOGLUCONOLACTONASE/ CATALYTIC
AT3G16950	Predicted Affinity Capture-MS	FSW = 0.4682	Unknown	LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE
AT2G31170	Predicted in vitro two hybrid Affinity Capture-MS	FSW = 0.1821	Unknown	SYCO ARATH ATP BINDING / AMINOACYL-TRNA LIGASE/ CYSTEINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT5G13050	Predicted Affinity Capture-MS	FSW = 0.5063	Unknown	5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
AT3G11630	Predicted Affinity Capture-MS	FSW = 0.3084	Unknown	2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT4G23430	Predicted Affinity Capture-MS	FSW = 0.1010	Unknown	SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN
AT3G10050	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0375	Unknown	OMR1 (L-O-METHYLTHREONINE RESISTANT 1) L-THREONINE AMMONIA-LYASE
AT1G04290	Predicted two hybrid	FSW = 0.0120	Unknown	THIOESTERASE FAMILY PROTEIN
AT3G61200	Predicted two hybrid	FSW = 0.0197	Unknown	THIOESTERASE FAMILY PROTEIN
AT2G35690	Predicted Affinity Capture-MS	FSW = 0.4481	Unknown	ACX5 (ACYL-COA OXIDASE 5) FAD BINDING / ACYL-COA DEHYDROGENASE/ ACYL-COA OXIDASE/ ELECTRON CARRIER/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-CH GROUP OF DONORS
AT1G08370	Predicted two hybrid	FSW = 0.0201	Unknown	DCP1 (DECAPPING 1) M7G(5)PPPN DIPHOSPHATASE/ PROTEIN HOMODIMERIZATION
AT5G44500	Predicted Affinity Capture-MS	FSW = 0.4480	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT3G21700	Predicted Affinity Capture-MS	FSW = 0.0209	Unknown	SGP2 GTP BINDING
AT3G13445	Predicted Affinity Capture-MS	FSW = 0.1359	Unknown	TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT5G59870	Predicted Affinity Capture-MS	FSW = 0.5809	Unknown	HTA6 DNA BINDING
AT2G37470	Predicted Affinity Capture-MS	FSW = 0.4333	Unknown	HISTONE H2B PUTATIVE
AT2G18760	Predicted Affinity Capture-MS	FSW = 0.0045	Unknown	CHR8 (CHROMATIN REMODELING 8) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G22290	Predicted Synthetic Lethality	FSW = 0.0072	Unknown	ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D) GTP BINDING
AT1G72480	Predicted Synthetic Lethality Affinity Capture-MS	FSW = 0.4531	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN GOLGI APPARATUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G010701) HAS 422 BLAST HITS TO 420 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 208 FUNGI - 101 PLANTS - 83 VIRUSES - 0 OTHER EUKARYOTES - 30 (SOURCE NCBI BLINK)
AT2G13650	Predicted Affinity Capture-MS	FSW = 0.4716	Unknown	GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT4G30990	Predicted Affinity Capture-MS	FSW = 0.4281	Unknown	BINDING
AT5G26710	Predicted Affinity Capture-MS	FSW = 0.0241	Unknown	GLUTAMATE-TRNA LIGASE PUTATIVE / GLUTAMYL-TRNA SYNTHETASE PUTATUVE / GLURS PUTATIVE
AT4G00900	Predicted two hybrid	FSW = 0.0076	Unknown	ECA2 (ER-TYPE CA2+-ATPASE 2) CALCIUM-TRANSPORTING ATPASE
AT3G16050	Predicted Affinity Capture-MS	FSW = 0.2968	Unknown	A37 PROTEIN HETERODIMERIZATION
AT3G08730	Predicted Affinity Capture-MS	FSW = 0.1364	Unknown	PK1 (PROTEIN-SERINE KINASE 1) KINASE/ PROTEIN BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT3G52580	Predicted Affinity Capture-MS	FSW = 0.4974	Unknown	40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT5G41480	Predicted Affinity Capture-MS	FSW = 0.4195	Unknown	GLA1 (GLOBULAR ARREST1) DIHYDROFOLATE SYNTHASE
AT3G12530	Predicted Affinity Capture-MS	FSW = 0.4087	Unknown	PSF2
AT5G47880	Predicted Affinity Capture-MS	FSW = 0.4749	Unknown	ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) TRANSLATION RELEASE FACTOR
AT2G24040	Predicted Affinity Capture-MS	FSW = 0.5465	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT4G25550	Predicted two hybrid	FSW = 0.0129	Unknown	PROTEIN BINDING
AT5G09390	Predicted two hybrid	FSW = 0.3447	Unknown	CD2-BINDING PROTEIN-RELATED
AT4G36630	Predicted two hybrid	FSW = 0.0121	Unknown	EMB2754 (EMBRYO DEFECTIVE 2754) BINDING / SMALL GTPASE REGULATOR
AT5G19510	Predicted two hybrid two hybrid	FSW = 0.0135	Unknown	ELONGATION FACTOR 1B ALPHA-SUBUNIT 2 (EEF1BALPHA2)
AT5G41770	Predicted two hybrid	FSW = 0.0068	Unknown	CROOKED NECK PROTEIN PUTATIVE / CELL CYCLE PROTEIN PUTATIVE
AT3G02760	Predicted in vivo in vitro Affinity Capture-MS	FSW = 0.0490	Unknown	ATP BINDING / AMINOACYL-TRNA LIGASE/ HISTIDINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT5G38830	Predicted in vitro two hybrid Affinity Capture-MS	FSW = 0.0191	Unknown	TRNA SYNTHETASE CLASS I (C) FAMILY PROTEIN
AT1G11530	Predicted Affinity Capture-MS	FSW = 0.5161	Unknown	ATCXXS1 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1) PROTEIN DISULFIDE ISOMERASE
AT1G20696	Predicted Affinity Capture-MS	FSW = 0.4611	Unknown	HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT3G12690	Predicted Affinity Capture-MS	FSW = 0.5649	Unknown	AGC15 (AGC KINASE 15) KINASE
AT3G20650	Predicted Affinity Capture-MS	FSW = 0.4192	Unknown	MRNA CAPPING ENZYME FAMILY PROTEIN
AT3G23570	Predicted Affinity Capture-MS	FSW = 0.4006	Unknown	DIENELACTONE HYDROLASE FAMILY PROTEIN
AT3G30842	Predicted Affinity Capture-MS	FSW = 0.4285	Unknown	PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT3G52390	Predicted Affinity Capture-MS	FSW = 0.4290	Unknown	TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT5G19660	Predicted Affinity Capture-MS	FSW = 0.5031	Unknown	S1P (SITE-1 PROTEASE) ENDOPEPTIDASE/ SERINE-TYPE ENDOPEPTIDASE
AT1G24706	Predicted Affinity Capture-MS	FSW = 0.2569	Unknown	UNKNOWN PROTEIN
AT1G33110	Predicted Affinity Capture-MS	FSW = 0.4621	Unknown	MATE EFFLUX FAMILY PROTEIN
AT1G51770	Predicted Affinity Capture-MS	FSW = 0.5705	Unknown	UNKNOWN PROTEIN
AT1G62880	Predicted Affinity Capture-MS	FSW = 0.5393	Unknown	CORNICHON FAMILY PROTEIN
AT1G64480	Predicted Affinity Capture-MS	FSW = 0.5472	Unknown	CBL8 (CALCINEURIN B-LIKE PROTEIN 8) CALCIUM ION BINDING
AT1G71280	Predicted Affinity Capture-MS	FSW = 0.4983	Unknown	DEAD/DEAH BOX HELICASE PUTATIVE
AT2G19910	Predicted Affinity Capture-MS	FSW = 0.2845	Unknown	RNA-DEPENDENT RNA POLYMERASE FAMILY PROTEIN
AT2G34250	Predicted Affinity Capture-MS	FSW = 0.0825	Unknown	PROTEIN TRANSPORT PROTEIN SEC61 PUTATIVE
AT2G42160	Predicted Affinity Capture-MS	FSW = 0.1998	Unknown	ZINC FINGER (UBIQUITIN-HYDROLASE) DOMAIN-CONTAINING PROTEIN
AT2G43360	Predicted Affinity Capture-MS	FSW = 0.2307	Unknown	BIO2 (BIOTIN AUXOTROPH 2) BIOTIN SYNTHASE
AT2G46860	Predicted Affinity Capture-MS	FSW = 0.5286	Unknown	ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT3G05960	Predicted Affinity Capture-MS	FSW = 0.3553	Unknown	STP6 (SUGAR TRANSPORTER 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G19940	Predicted Affinity Capture-MS	FSW = 0.4168	Unknown	SUGAR TRANSPORTER PUTATIVE
AT3G59410	Predicted Affinity Capture-MS	FSW = 0.1794	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT3G62770	Predicted Affinity Capture-MS	FSW = 0.3795	Unknown	ATATG18A
AT4G17770	Predicted Affinity Capture-MS	FSW = 0.5176	Unknown	ATTPS5 PROTEIN BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT4G25860	Predicted Affinity Capture-MS	FSW = 0.4681	Unknown	ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A) OXYSTEROL BINDING
AT4G26230	Predicted Affinity Capture-MS	FSW = 0.3201	Unknown	60S RIBOSOMAL PROTEIN L31 (RPL31B)
AT4G39330	Predicted Affinity Capture-MS	FSW = 0.4379	Unknown	CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT5G09630	Predicted Affinity Capture-MS	FSW = 0.4765	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT5G17000	Predicted Affinity Capture-MS	FSW = 0.0917	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G19820	Predicted Affinity Capture-MS	FSW = 0.4106	Unknown	EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT5G41190	Predicted Affinity Capture-MS	FSW = 0.4049	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)
AT5G54200	Predicted Affinity Capture-MS	FSW = 0.2827	Unknown	WD-40 REPEAT FAMILY PROTEIN
AT3G05540	Predicted Affinity Capture-MS	FSW = 0.1763	Unknown	INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CYTOPLASM CONTAINS INTERPRO DOMAIN/S TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN (INTERPROIPR018105) TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR001983) MSS4/TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR011323) TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN CONSERVED SITE (INTERPROIPR018103) MSS4-LIKE (INTERPROIPR011057) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) (TAIRAT3G166401) HAS 640 BLAST HITS TO 640 PROTEINS IN 231 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 343 FUNGI - 110 PLANTS - 105 VIRUSES - 0 OTHER EUKARYOTES - 82 (SOURCE NCBI BLINK)
AT2G36930	Predicted Affinity Capture-MS	FSW = 0.0106	Unknown	ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN
AT1G17720	Predicted Affinity Capture-MS	FSW = 0.0166	Unknown	ATB BETA NUCLEOTIDE BINDING / PROTEIN PHOSPHATASE TYPE 2A REGULATOR
AT2G22480	Predicted Affinity Capture-MS	FSW = 0.0199	Unknown	PFK5 (PHOSPHOFRUCTOKINASE 5) 6-PHOSPHOFRUCTOKINASE
AT1G30580	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0199	Unknown	GTP BINDING
AT1G52360	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0111	Unknown	COATOMER PROTEIN COMPLEX SUBUNIT BETA 2 (BETA PRIME) PUTATIVE
AT2G39770	Predicted Affinity Capture-MS	FSW = 0.0275	Unknown	CYT1 (CYTOKINESIS DEFECTIVE 1) MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE/ NUCLEOTIDYLTRANSFERASE
AT1G10170	Predicted Affinity Capture-MS	FSW = 0.0157	Unknown	ATNFXL1 (ARABIDOPSIS THALIANA NF-X-LIKE 1) PROTEIN BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING
AT3G24090	Predicted Affinity Capture-MS	FSW = 0.0133	Unknown	GLUTAMINE-FRUCTOSE-6-PHOSPHATE TRANSAMINASE (ISOMERIZING)/ SUGAR BINDING / TRANSAMINASE
AT4G27640	Predicted Affinity Capture-MS	FSW = 0.0159	Unknown	IMPORTIN BETA-2 SUBUNIT FAMILY PROTEIN
AT5G26680	Predicted Synthetic Lethality	FSW = 0.0052	Unknown	ENDONUCLEASE PUTATIVE
AT1G09660	Predicted two hybrid	FSW = 0.0090	Unknown	KH DOMAIN-CONTAINING QUAKING PROTEIN PUTATIVE

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

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AT1G09640 - ( elongation factor 1B-gamma putative / eEF-1B gamma putative )

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