AtPIN will be upgraded. Please send your suggestions here

AT3G11630 - ( 2-cys peroxiredoxin chloroplast (BAS1) )

177 Proteins interacs with AT3G11630

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT3G20390	Predicted Affinity Capture-MS	FSW = 0.1786	Class C: plastid	ENDORIBONUCLEASE L-PSP FAMILY PROTEIN
AT1G72370	Predicted synthetic growth defect	FSW = 0.0072	Class C: plastid	P40 STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G07890	Predicted synthetic growth defect	FSW = 0.0575	Class C: plastid	APX1 (ASCORBATE PEROXIDASE 1) L-ASCORBATE PEROXIDASE
AT1G15210	Predicted Affinity Capture-MS	FSW = 0.3598	Class C: plastid	PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT3G16950	Predicted Affinity Capture-MS	FSW = 0.4111	Class C: plastid	LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE
AT5G43530	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.1253	Class C: plastid	SNF2 DOMAIN-CONTAINING PROTEIN / HELICASE DOMAIN-CONTAINING PROTEIN / RING FINGER DOMAIN-CONTAINING PROTEIN
AT2G39290	Predicted Affinity Capture-MS	FSW = 0.0354	Class C: plastid	PGP1 (PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 1) CDP-ALCOHOL PHOSPHATIDYLTRANSFERASE/ CDP-DIACYLGLYCEROL-GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE
AT3G54660	Predicted Synthetic Lethality	FSW = 0.0069	Class C: plastid	GR (GLUTATHIONE REDUCTASE) ATP BINDING / GLUTATHIONE-DISULFIDE REDUCTASE
AT2G01350	Predicted Affinity Capture-MS	FSW = 0.0777	Class C: plastid	QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE) NICOTINATE-NUCLEOTIDE DIPHOSPHORYLASE (CARBOXYLATING)
AT1G22170	Predicted Affinity Capture-MS	FSW = 0.0086	Class C: plastid	PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE FAMILY PROTEIN
AT5G13050	Predicted Affinity Capture-MS	FSW = 0.3550	Class C: plastid	5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
AT1G51040	Predicted Affinity Capture-MS	FSW = 0.1625	Class C: plastid	PHOSPHATIDYLINOSITOL 4-KINASE PUTATIVE
AT5G51820	Predicted Synthetic Lethality	FSW = 0.0179	Class C: plastid	PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE
AT3G06040	Predicted Affinity Capture-MS	FSW = 0.3207	Class C: plastid	RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT4G01690	Predicted synthetic growth defect Co-expression	FSW = 0.1123	Class C: plastid	PPOX PROTOPORPHYRINOGEN OXIDASE
AT1G80030	Predicted Affinity Capture-MS	FSW = 0.1062	Class C: plastid	DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT3G04770	Predicted synthetic growth defect	FSW = 0.0107	Class C: plastid	RPSAB (40S RIBOSOMAL PROTEIN SA B) STRUCTURAL CONSTITUENT OF RIBOSOME
ATCG00830	Predicted synthetic growth defect	FSW = 0.0090	Class C: plastid	ENCODES A CHLOROPLAST RIBOSOMAL PROTEIN L2 A CONSTITUENT OF THE LARGE SUBUNIT OF THE RIBOSOMAL COMPLEX
AT4G32470	Predicted Affinity Capture-MS	FSW = 0.3766	Unknown	UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE
AT3G27240	Predicted synthetic growth defect	FSW = 0.0209	Unknown	CYTOCHROME C1 PUTATIVE
AT3G12580	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0828	Unknown	HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING
AT2G20450	Predicted Affinity Capture-MS	FSW = 0.3418	Unknown	60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT1G11260	Predicted Affinity Capture-MS	FSW = 0.0379	Unknown	STP1 (SUGAR TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G62150	Predicted Affinity Capture-MS	FSW = 0.1163	Unknown	PGP21 (P-GLYCOPROTEIN 21) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT1G22780	Predicted Affinity Capture-MS	FSW = 0.3244	Unknown	PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G28715	Predicted synthetic growth defect	FSW = 0.0095	Unknown	H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT3G08710	Predicted Affinity Capture-MS	FSW = 0.1861	Unknown	ATH9 (THIOREDOXIN H-TYPE 9)
AT3G28710	Predicted synthetic growth defect	FSW = 0.0618	Unknown	H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT1G07930	Predicted Affinity Capture-MS	FSW = 0.3960	Unknown	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT5G40810	Predicted synthetic growth defect	FSW = 0.0238	Unknown	CYTOCHROME C1 PUTATIVE
AT2G47470	Predicted Gene fusion method	FSW = 0.0113	Unknown	UNE5 (UNFERTILIZED EMBRYO SAC 5) PROTEIN DISULFIDE ISOMERASE
AT3G44110	Predicted Synthetic Lethality	FSW = 0.0137	Unknown	ATJ3 PROTEIN BINDING
AT5G20020	Predicted Affinity Capture-MS	FSW = 0.0284	Unknown	RAN2 GTP BINDING / GTPASE/ PROTEIN BINDING
AT2G06510	Predicted Phenotypic Enhancement	FSW = 0.0614	Unknown	RPA1A (REPLICATION PROTEIN A 1A) DNA BINDING / NUCLEIC ACID BINDING
AT2G19860	Predicted Affinity Capture-MS	FSW = 0.3261	Unknown	HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT3G08950	Predicted Affinity Capture-MS	FSW = 0.3932	Unknown	ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN
AT3G19980	Predicted Affinity Capture-MS	FSW = 0.2897	Unknown	ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT5G22060	Predicted Synthetic Lethality	FSW = 0.0258	Unknown	ATJ2 PROTEIN BINDING
AT5G60390	Predicted Affinity Capture-MS	FSW = 0.2537	Unknown	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT5G23740	Predicted Affinity Capture-MS	FSW = 0.3113	Unknown	RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA) STRUCTURAL CONSTITUENT OF RIBOSOME
AT5G62880	Predicted Affinity Capture-MS	FSW = 0.0400	Unknown	ARAC10 GTP BINDING
AT3G47370	Predicted Affinity Capture-MS	FSW = 0.0740	Unknown	40S RIBOSOMAL PROTEIN S20 (RPS20B)
AT1G27970	Predicted Affinity Capture-MS	FSW = 0.3330	Unknown	NTF2B (NUCLEAR TRANSPORT FACTOR 2B) RAN GTPASE BINDING / PROTEIN TRANSPORTER
AT3G61430	Predicted Affinity Capture-MS	FSW = 0.0905	Unknown	PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A) WATER CHANNEL
AT4G28950	Predicted Affinity Capture-MS	FSW = 0.1253	Unknown	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9) GTP BINDING
AT1G07670	Predicted synthetic growth defect	FSW = 0.0325	Unknown	CALCIUM-TRANSPORTING ATPASE
AT5G43370	Predicted Affinity Capture-MS	FSW = 0.3383	Unknown	APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G13320	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1397	Unknown	PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3) BINDING / PROTEIN PHOSPHATASE TYPE 2A REGULATOR
AT4G04720	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0182	Unknown	CPK21 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G62300	Predicted Affinity Capture-MS	FSW = 0.2626	Unknown	40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT4G24400	Predicted Affinity Capture-MS	FSW = 0.3236	Unknown	CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) KINASE/ PROTEIN KINASE
AT4G36860	Predicted Affinity Capture-MS	FSW = 0.3477	Unknown	ZINC ION BINDING
AT3G18524	Predicted Phenotypic Enhancement	FSW = 0.0498	Unknown	MSH2 (MUTS HOMOLOG 2) ATP BINDING / DAMAGED DNA BINDING / MISMATCHED DNA BINDING / PROTEIN BINDING
AT1G09640	Predicted Affinity Capture-MS	FSW = 0.3084	Unknown	ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE
AT1G79930	Predicted Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.0294	Unknown	HSP91 ATP BINDING
AT1G80050	Predicted Synthetic Lethality	FSW = 0.0177	Unknown	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) ADENINE PHOSPHORIBOSYLTRANSFERASE/ PHOSPHATE TRANSMEMBRANE TRANSPORTER
AT3G24170	Predicted Synthetic Lethality	FSW = 0.0209	Unknown	ATGR1 (GLUTATHIONE-DISULFIDE REDUCTASE) FAD BINDING / NADP OR NADPH BINDING / GLUTATHIONE-DISULFIDE REDUCTASE/ OXIDOREDUCTASE
AT1G70580	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0894	Unknown	AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2) L-ALANINE2-OXOGLUTARATE AMINOTRANSFERASE/ GLYCINE2-OXOGLUTARATE AMINOTRANSFERASE
AT2G30260	Predicted synthetic growth defect	FSW = 0.0415	Unknown	U2B (U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B) RNA BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT3G54610	Predicted synthetic growth defect	FSW = 0.0071	Unknown	GCN5 DNA BINDING / H3 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE
AT4G02070	Predicted Phenotypic Enhancement	FSW = 0.0594	Unknown	MSH6 (MUTS HOMOLOG 6) DAMAGED DNA BINDING
AT2G03870	Predicted synthetic growth defect	FSW = 0.0416	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT5G59870	Predicted Affinity Capture-MS	FSW = 0.3595	Unknown	HTA6 DNA BINDING
AT3G13940	Predicted synthetic growth defect	FSW = 0.0107	Unknown	DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT5G44500	Predicted Affinity Capture-MS	FSW = 0.2869	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT1G06960	Predicted synthetic growth defect	FSW = 0.0190	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN U2B PUTATIVE / SPLICEOSOMAL PROTEIN PUTATIVE
AT5G22750	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.1445	Unknown	RAD5 ATP BINDING / ATP-DEPENDENT HELICASE/ DNA BINDING / HELICASE/ HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING / PROTEIN BINDING / ZINC ION BINDING
AT2G26150	Predicted Synthetic Lethality	FSW = 0.1060	Unknown	ATHSFA2 DNA BINDING / TRANSCRIPTION FACTOR
AT3G06720	Predicted interaction prediction	FSW = 0.0218	Unknown	IMPA-1 (IMPORTIN ALPHA ISOFORM 1) BINDING / PROTEIN TRANSPORTER
AT1G07370	Predicted Phenotypic Enhancement	FSW = 0.1164	Unknown	PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN) DNA BINDING / DNA POLYMERASE PROCESSIVITY FACTOR/ PROTEIN BINDING
AT2G37470	Predicted Affinity Capture-MS	FSW = 0.2881	Unknown	HISTONE H2B PUTATIVE
AT3G19210	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1731	Unknown	ATRAD54 (ARABIDOPSIS HOMOLOG OF RAD54) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT5G25150	Predicted Phenotypic Enhancement	FSW = 0.0042	Unknown	TAF5 (TBP-ASSOCIATED FACTOR 5) NUCLEOTIDE BINDING / TRANSCRIPTION REGULATOR
AT2G44950	Predicted synthetic growth defect	FSW = 0.1258	Unknown	HUB1 (HISTONE MONO-UBIQUITINATION 1) PROTEIN BINDING / PROTEIN HOMODIMERIZATION/ UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT1G18600	Predicted synthetic growth defect	FSW = 0.0251	Unknown	RBL12 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 12)
AT5G51220	Predicted synthetic growth defect	FSW = 0.0058	Unknown	UBIQUINOL-CYTOCHROME C CHAPERONE FAMILY PROTEIN
AT2G18450	Predicted Affinity Capture-MS	FSW = 0.1426	Unknown	SDH1-2 SUCCINATE DEHYDROGENASE
AT1G24180	Predicted two hybrid	FSW = 0.0080	Unknown	IAR4 OXIDOREDUCTASE ACTING ON THE ALDEHYDE OR OXO GROUP OF DONORS DISULFIDE AS ACCEPTOR / PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING)
AT2G13650	Predicted Affinity Capture-MS	FSW = 0.3497	Unknown	GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT4G30990	Predicted Affinity Capture-MS	FSW = 0.3249	Unknown	BINDING
AT1G10130	Predicted synthetic growth defect	FSW = 0.0254	Unknown	ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3) CALCIUM-TRANSPORTING ATPASE/ CALMODULIN BINDING / MANGANESE-TRANSPORTING ATPASE/ PEROXIDASE
AT5G47720	Predicted Affinity Capture-MS	FSW = 0.0284	Unknown	ACETYL-COA C-ACYLTRANSFERASE PUTATIVE / 3-KETOACYL-COA THIOLASE PUTATIVE
AT2G31970	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.1540	Unknown	RAD50 ATP BINDING / NUCLEASE/ ZINC ION BINDING
AT5G57450	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1858	Unknown	XRCC3 ATP BINDING / DAMAGED DNA BINDING / PROTEIN BINDING / SINGLE-STRANDED DNA BINDING
AT5G66130	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1018	Unknown	ATRAD17 (ARABIDOPSIS THALIANA RADIATION SENSITIVE)
AT3G52580	Predicted Affinity Capture-MS	FSW = 0.3859	Unknown	40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT5G41480	Predicted Affinity Capture-MS	FSW = 0.3859	Unknown	GLA1 (GLOBULAR ARREST1) DIHYDROFOLATE SYNTHASE
AT4G29430	Predicted Affinity Capture-MS	FSW = 0.0888	Unknown	RPS15AE (RIBOSOMAL PROTEIN S15A E) STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G24040	Predicted Affinity Capture-MS	FSW = 0.3847	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT5G40820	Predicted synthetic growth defect	FSW = 0.0707	Unknown	ATRAD3 BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / PROTEIN SERINE/THREONINE KINASE
AT4G10920	Predicted Affinity Capture-MS	FSW = 0.0528	Unknown	KELP DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION REGULATOR
AT3G12530	Predicted Affinity Capture-MS	FSW = 0.3874	Unknown	PSF2
AT5G54260	Predicted Synthetic Lethality synthetic growth defect Synthetic Lethality	FSW = 0.1771	Unknown	MRE11 (MEIOTIC RECOMBINATION 11) ENDONUCLEASE/ EXONUCLEASE/ HYDROLASE/ MANGANESE ION BINDING / PROTEIN SERINE/THREONINE PHOSPHATASE
AT5G20850	Predicted Synthetic Lethality synthetic growth defect Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1342	Unknown	ATRAD51 ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ DAMAGED DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING / SEQUENCE-SPECIFIC DNA BINDING
AT1G04020	Predicted synthetic growth defect synthetic growth defect Phenotypic Enhancement Synthetic Lethality	FSW = 0.1603	Unknown	BARD1 (BREAST CANCER ASSOCIATED RING 1) DNA BINDING / TRANSCRIPTION COACTIVATOR
AT1G04730	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1578	Unknown	AAA-TYPE ATPASE FAMILY PROTEIN
AT1G05910	Predicted Affinity Capture-MS	FSW = 0.0852	Unknown	CELL DIVISION CYCLE PROTEIN 48-RELATED / CDC48-RELATED
AT1G10930	Predicted synthetic growth defect synthetic growth defect Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1054	Unknown	RECQ4A ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING
AT1G12470	Predicted synthetic growth defect	FSW = 0.0512	Unknown	PEP3/VPS18/DEEP ORANGE FAMILY PROTEIN
AT1G21710	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.0753	Unknown	OGG1 (8-OXOGUANINE-DNA GLYCOSYLASE 1) OXIDIZED PURINE BASE LESION DNA N-GLYCOSYLASE
AT1G23260	Predicted Phenotypic Enhancement	FSW = 0.0369	Unknown	MMZ1 (MMS ZWEI HOMOLOGUE 1) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT1G24706	Predicted Affinity Capture-MS	FSW = 0.1454	Unknown	UNKNOWN PROTEIN
AT1G34460	Predicted Affinity Capture-MS	FSW = 0.0676	Unknown	CYCB15 (CYCLIN B15) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G51770	Predicted Affinity Capture-MS	FSW = 0.3735	Unknown	UNKNOWN PROTEIN
AT1G60430	Predicted synthetic growth defect	FSW = 0.0444	Unknown	ARPC3 (ACTIN-RELATED PROTEIN C3) STRUCTURAL MOLECULE
AT1G60490	Predicted synthetic growth defect	FSW = 0.1021	Unknown	ATVPS34 1-PHOSPHATIDYLINOSITOL-3-KINASE/ BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR
AT1G62880	Predicted Affinity Capture-MS	FSW = 0.3481	Unknown	CORNICHON FAMILY PROTEIN
AT1G66740	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1769	Unknown	SGA2
AT1G67190	Predicted synthetic growth defect	FSW = 0.1419	Unknown	F-BOX FAMILY PROTEIN
AT1G71280	Predicted Affinity Capture-MS	FSW = 0.3128	Unknown	DEAD/DEAH BOX HELICASE PUTATIVE
AT1G78870	Predicted Phenotypic Enhancement	FSW = 0.0237	Unknown	UBC35 (UBIQUITIN-CONJUGATING ENZYME 35) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT1G79210	Predicted Affinity Capture-MS	FSW = 0.0800	Unknown	20S PROTEASOME ALPHA SUBUNIT B PUTATIVE
AT2G02760	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality	FSW = 0.1295	Unknown	ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2) UBIQUITIN-PROTEIN LIGASE
AT2G35390	Predicted Affinity Capture-MS	FSW = 0.1388	Unknown	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1 / PHOSPHORIBOSYL DIPHOSPHATE SYNTHETASE 1 (PRSI)
AT2G44580	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement interaction prediction	FSW = 0.1349	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT2G46860	Predicted Affinity Capture-MS	FSW = 0.3330	Unknown	ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT3G09560	Predicted Synthetic Lethality	FSW = 0.0353	Unknown	LIPIN FAMILY PROTEIN
AT3G09640	Predicted synthetic growth defect	FSW = 0.0070	Unknown	APX2 (ASCORBATE PEROXIDASE 2) L-ASCORBATE PEROXIDASE
AT1G11530	Predicted Affinity Capture-MS	FSW = 0.3315	Unknown	ATCXXS1 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1) PROTEIN DISULFIDE ISOMERASE
AT1G20696	Predicted Affinity Capture-MS	FSW = 0.2747	Unknown	HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G20920	Predicted Affinity Capture-MS	FSW = 0.2907	Unknown	DEAD BOX RNA HELICASE PUTATIVE
AT1G33110	Predicted Affinity Capture-MS	FSW = 0.3058	Unknown	MATE EFFLUX FAMILY PROTEIN
AT1G52500	Predicted Synthetic Lethality	FSW = 0.0188	Unknown	ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G53900	Predicted Affinity Capture-MS	FSW = 0.0910	Unknown	GTP BINDING / TRANSLATION INITIATION FACTOR
AT1G55730	Predicted Affinity Capture-MS	FSW = 0.3289	Unknown	ATCAX5 CALCIUMCATION ANTIPORTER/ CATIONCATION ANTIPORTER
AT1G59890	Predicted Phenotypic Enhancement	FSW = 0.0481	Unknown	SNL5 (SIN3-LIKE 5)
AT1G64480	Predicted Affinity Capture-MS	FSW = 0.3718	Unknown	CBL8 (CALCINEURIN B-LIKE PROTEIN 8) CALCIUM ION BINDING
AT1G78970	Predicted Affinity Capture-MS	FSW = 0.0906	Unknown	LUP1 (LUPEOL SYNTHASE 1) BETA-AMYRIN SYNTHASE/ LUPEOL SYNTHASE
AT1G79890	Predicted Phenotypic Enhancement	FSW = 0.0347	Unknown	HELICASE-RELATED
AT2G16740	Predicted Affinity Capture-MS	FSW = 0.1985	Unknown	UBC29 (UBIQUITIN-CONJUGATING ENZYME 29) UBIQUITIN-PROTEIN LIGASE
AT2G21250	Predicted Affinity Capture-MS	FSW = 0.3059	Unknown	MANNOSE 6-PHOSPHATE REDUCTASE (NADPH-DEPENDENT) PUTATIVE
AT2G39770	Predicted Affinity Capture-MS	FSW = 0.0173	Unknown	CYT1 (CYTOKINESIS DEFECTIVE 1) MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE/ NUCLEOTIDYLTRANSFERASE
AT2G48100	Predicted Synthetic Lethality	FSW = 0.0197	Unknown	EXONUCLEASE FAMILY PROTEIN
AT3G02000	Predicted Affinity Capture-MS	FSW = 0.0806	Unknown	ROXY1 DISULFIDE OXIDOREDUCTASE
AT3G05960	Predicted Affinity Capture-MS	FSW = 0.2851	Unknown	STP6 (SUGAR TRANSPORTER 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G12690	Predicted Affinity Capture-MS	FSW = 0.3397	Unknown	AGC15 (AGC KINASE 15) KINASE
AT3G19940	Predicted Affinity Capture-MS	FSW = 0.3090	Unknown	SUGAR TRANSPORTER PUTATIVE
AT3G23570	Predicted Affinity Capture-MS	FSW = 0.3875	Unknown	DIENELACTONE HYDROLASE FAMILY PROTEIN
AT3G30842	Predicted Affinity Capture-MS	FSW = 0.2770	Unknown	PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT3G42660	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.1640	Unknown	NUCLEOTIDE BINDING
AT3G45190	Predicted Affinity Capture-MS	FSW = 0.0076	Unknown	SIT4 PHOSPHATASE-ASSOCIATED FAMILY PROTEIN
AT3G52390	Predicted Affinity Capture-MS	FSW = 0.4064	Unknown	TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT3G59410	Predicted Affinity Capture-MS	FSW = 0.0654	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT3G59540	Predicted Synthetic Lethality	FSW = 0.0197	Unknown	60S RIBOSOMAL PROTEIN L38 (RPL38B)
AT4G17770	Predicted Affinity Capture-MS	FSW = 0.3161	Unknown	ATTPS5 PROTEIN BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT4G25120	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1553	Unknown	ATP BINDING / ATP-DEPENDENT DNA HELICASE/ DNA BINDING / HYDROLASE
AT4G30870	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.0886	Unknown	MUS81 (MMS AND UV SENSITIVE 81) ENDONUCLEASE/ NUCLEIC ACID BINDING
AT4G33070	Predicted Affinity Capture-MS	FSW = 0.0713	Unknown	PYRUVATE DECARBOXYLASE PUTATIVE
AT5G09630	Predicted Affinity Capture-MS	FSW = 0.3603	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT5G19660	Predicted Affinity Capture-MS	FSW = 0.3219	Unknown	S1P (SITE-1 PROTEASE) ENDOPEPTIDASE/ SERINE-TYPE ENDOPEPTIDASE
AT5G23290	Predicted Affinity Capture-MS	FSW = 0.0352	Unknown	PDF5 (PREFOLDIN 5) UNFOLDED PROTEIN BINDING
AT5G26680	Predicted synthetic growth defect synthetic growth defect Phenotypic Enhancement	FSW = 0.1852	Unknown	ENDONUCLEASE PUTATIVE
AT5G46150	Predicted Affinity Capture-MS	FSW = 0.1832	Unknown	LEM3 (LIGAND-EFFECT MODULATOR 3) FAMILY PROTEIN / CDC50 FAMILY PROTEIN
AT5G48640	Predicted Phenotypic Suppression	FSW = 0.0371	Unknown	CYCLIN FAMILY PROTEIN
AT3G12400	Predicted synthetic growth defect	FSW = 0.0833	Unknown	ELC UBIQUITIN BINDING
AT3G54380	Predicted Phenotypic Suppression	FSW = 0.0244	Unknown	SAC3/GANP FAMILY PROTEIN
AT3G57550	Predicted Affinity Capture-MS	FSW = 0.1121	Unknown	AGK2 (GUANYLATE KINASE) GUANYLATE KINASE
AT3G62770	Predicted Affinity Capture-MS	FSW = 0.2733	Unknown	ATATG18A
AT4G19003	Predicted synthetic growth defect	FSW = 0.0534	Unknown	VPS25
AT4G26230	Predicted Affinity Capture-MS	FSW = 0.2438	Unknown	60S RIBOSOMAL PROTEIN L31 (RPL31B)
AT4G38630	Predicted synthetic growth defect	FSW = 0.1061	Unknown	RPN10 (REGULATORY PARTICLE NON-ATPASE 10) PEPTIDE RECEPTOR
AT4G39330	Predicted Affinity Capture-MS	FSW = 0.3954	Unknown	CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT5G06420	Predicted Affinity Capture-MS	FSW = 0.0895	Unknown	ZINC FINGER (CCCH-TYPE/C3HC4-TYPE RING FINGER) FAMILY PROTEIN
AT5G13780	Predicted Phenotypic Enhancement	FSW = 0.1359	Unknown	GCN5-RELATED N-ACETYLTRANSFERASE PUTATIVE
AT5G19820	Predicted Affinity Capture-MS	FSW = 0.2973	Unknown	EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT5G27970	Predicted synthetic growth defect	FSW = 0.0975	Unknown	BINDING
AT5G41190	Predicted Affinity Capture-MS	FSW = 0.3671	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)
AT5G63920	Predicted Phenotypic Enhancement	FSW = 0.1182	Unknown	DNA TOPOISOMERASE III ALPHA PUTATIVE
AT2G43790	Predicted Affinity Capture-Western	FSW = 0.0011	Unknown	ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6) MAP KINASE/ KINASE
AT1G11660	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0426	Unknown	HEAT SHOCK PROTEIN PUTATIVE
AT1G55255	Predicted synthetic growth defect	FSW = 0.0985	Unknown	HEAT SHOCK PROTEIN PUTATIVE
AT5G40490	Predicted synthetic growth defect	FSW = 0.0696	Unknown	RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT2G23420	Predicted synthetic growth defect	FSW = 0.0801	Unknown	NAPRT2 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2) NICOTINATE PHOSPHORIBOSYLTRANSFERASE
AT2G44065	Predicted synthetic growth defect	FSW = 0.0583	Unknown	RIBOSOMAL PROTEIN L2 FAMILY PROTEIN
AT1G14400	Predicted Synthetic Lethality	FSW = 0.1200	Unknown	UBC1 (UBIQUITIN CARRIER PROTEIN 1) UBIQUITIN-PROTEIN LIGASE
AT1G31170	Predicted two hybrid	FSW = 0.0132	Unknown	SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS
AT3G25210	Predicted Gene fusion method	FSW = 0.0199	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CHLOROPLAST EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PENTATRICOPEPTIDE REPEAT (INTERPROIPR002885) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G278001) HAS 13348 BLAST HITS TO 4225 PROTEINS IN 143 SPECIES ARCHAE - 3 BACTERIA - 6 METAZOA - 114 FUNGI - 126 PLANTS - 12736 VIRUSES - 0 OTHER EUKARYOTES - 363 (SOURCE NCBI BLINK)

Downloads

Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

AtPIN will be upgraded. Please send your suggestions here

AT3G11630 - ( 2-cys peroxiredoxin chloroplast (BAS1) )

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown