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AT5G23290 - ( PDF5 (PREFOLDIN 5) unfolded protein binding )

133 Proteins interacs with AT5G23290

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT4G14960	Predicted interologs mapping	FSW = 0.0828	Unknown	TUA6 STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT4G29130	Predicted Synthetic Lethality interaction prediction	FSW = 0.0397	Unknown	HXK1 (HEXOKINASE 1) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT1G20010	Predicted Synthetic Lethality	FSW = 0.0923	Unknown	TUB5 STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT1G04820	Predicted interologs mapping	FSW = 0.0776	Unknown	TUA4 STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT1G07770	Predicted Synthetic Lethality interaction prediction	FSW = 0.0116	Unknown	RPS15A (RIBOSOMAL PROTEIN S15A) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G28715	Predicted Synthetic Lethality interaction prediction	FSW = 0.0167	Unknown	H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT3G28710	Predicted Synthetic Lethality	FSW = 0.0207	Unknown	H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT5G45130	Predicted Phenotypic Suppression	FSW = 0.0337	Unknown	RHA1 (RAB HOMOLOG 1) GTP BINDING
AT4G01320	Predicted Synthetic Lethality interaction prediction	FSW = 0.0343	Unknown	ATSTE24 ENDOPEPTIDASE/ METALLOENDOPEPTIDASE
AT3G60840	Predicted interaction prediction Synthetic Lethality	FSW = 0.1867	Unknown	MAP65-4 (MICROTUBULE-ASSOCIATED PROTEIN 65-4)
AT2G01690	Predicted Synthetic Lethality interaction prediction	FSW = 0.0706	Unknown	BINDING
AT3G22110	Predicted Phenotypic Suppression Affinity Capture-MS	FSW = 0.0749	Unknown	PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT1G50460	Predicted Synthetic Lethality	FSW = 0.0632	Unknown	HKL1 (HEXOKINASE-LIKE 1) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT3G02520	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.0676	Unknown	GRF7 (GENERAL REGULATORY FACTOR 7) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT4G33650	Predicted Affinity Capture-MS	FSW = 0.0045	Unknown	DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP BINDING / GTPASE/ PHOSPHOINOSITIDE BINDING
AT5G59690	Predicted Phenotypic Suppression	FSW = 0.0722	Unknown	HISTONE H4
AT3G55400	Predicted two hybrid two hybrid	FSW = 0.0036	Unknown	OVA1 (OVULE ABORTION 1) ATP BINDING / AMINOACYL-TRNA LIGASE/ METHIONINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT1G16880	Predicted Affinity Capture-MS	FSW = 0.0047	Unknown	URIDYLYLTRANSFERASE-RELATED
AT5G16630	Predicted Phenotypic Suppression	FSW = 0.0184	Unknown	RAD4 DAMAGED DNA BINDING
AT3G11630	Predicted Affinity Capture-MS	FSW = 0.0352	Unknown	2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT1G71440	Predicted interaction prediction Synthetic Lethality Phenotypic Enhancement	FSW = 0.2165	Unknown	PFI (PFIFFERLING)
AT1G35160	Predicted Synthetic Lethality	FSW = 0.0405	Unknown	GF14 PHI (GF14 PROTEIN PHI CHAIN) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT5G12250	Predicted Synthetic Lethality	FSW = 0.1152	Unknown	TUB6 (BETA-6 TUBULIN) STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT2G14120	Predicted Synthetic Lethality interaction prediction	FSW = 0.0244	Unknown	DYNAMIN-LIKE PROTEIN 2B (ADL2B)
AT3G61650	Predicted interaction prediction Synthetic Lethality Affinity Capture-Western	FSW = 0.1104	Unknown	TUBG1 (GAMMA-TUBULIN) GTP BINDING / GTPASE/ STRUCTURAL MOLECULE
AT1G59820	Predicted Synthetic Lethality interaction prediction	FSW = 0.0214	Unknown	ALA3 (AMINOPHOSPHOLIPID ATPASE3) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM / PHOSPHOLIPID TRANSPORTER
AT5G23630	Predicted Synthetic Lethality interaction prediction	FSW = 0.0729	Unknown	ATPASE E1-E2 TYPE FAMILY PROTEIN / HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILIY PROTEIN
AT4G29810	Predicted two hybrid Affinity Capture-Western	FSW = 0.0054	Unknown	ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2) MAP KINASE KINASE/ KINASE
AT1G13210	Predicted Synthetic Lethality	FSW = 0.0194	Unknown	ACAL (AUTOINHIBITED CA2+/ATPASE II) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM / CALMODULIN BINDING
AT1G32090	Predicted interaction prediction	FSW = 0.0097	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT1G11960	Predicted Synthetic Lethality	FSW = 0.0331	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN PLASMA MEMBRANE EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF221 (INTERPROIPR003864) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED (TAIRAT1G623201) HAS 746 BLAST HITS TO 706 PROTEINS IN 111 SPECIES ARCHAE - 0 BACTERIA - 4 METAZOA - 131 FUNGI - 370 PLANTS - 224 VIRUSES - 0 OTHER EUKARYOTES - 17 (SOURCE NCBI BLINK)
AT1G73180	Predicted Synthetic Lethality Co-expression	FSW = 0.0178	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR-RELATED
AT2G44680	Predicted Phenotypic Suppression	FSW = 0.0742	Unknown	CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE
AT4G26720	Predicted Phenotypic Suppression	FSW = 0.0477	Unknown	PPX1 (PROTEIN PHOSPHATASE X 1) PROTEIN SERINE/THREONINE PHOSPHATASE
AT4G05190	Predicted Synthetic Lethality Co-expression	FSW = 0.2448	Unknown	ATK5 (ARABIDOPSIS THALIANA KINESIN 5) MICROTUBULE MOTOR
AT5G67270	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Co-expression	FSW = 0.2696	Unknown	ATEB1C (MICROTUBULE END BINDING PROTEIN 1) MICROTUBULE BINDING
AT2G38810	Predicted interaction prediction Co-expression	FSW = 0.1438	Unknown	HTA8 (HISTONE H2A 8) DNA BINDING
AT3G12810	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.1799	Unknown	PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT3G16980	Predicted Synthetic Lethality	FSW = 0.0298	Unknown	NRPB9A DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ NUCLEIC ACID BINDING / TRANSCRIPTION REGULATOR/ ZINC ION BINDING
AT5G35910	Predicted Phenotypic Suppression	FSW = 0.0610	Unknown	3-5 EXONUCLEASE DOMAIN-CONTAINING PROTEIN / HELICASE AND RNASE D C-TERMINAL DOMAIN-CONTAINING PROTEIN / HRDC DOMAIN-CONTAINING PROTEIN
AT4G29390	Predicted Affinity Capture-MS	FSW = 0.0058	Unknown	40S RIBOSOMAL PROTEIN S30 (RPS30B)
AT1G02740	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1126	Unknown	CHROMATIN BINDING
AT2G13370	Predicted Phenotypic Suppression	FSW = 0.1173	Unknown	CHR5 (CHROMATIN REMODELING 5) ATP BINDING / DNA BINDING / CHROMATIN BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G36740	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.2014	Unknown	SWC2 DNA BINDING / TRANSCRIPTION FACTOR
AT2G38560	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1045	Unknown	TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION ELONGATION FACTOR/ TRANSCRIPTION FACTOR
AT5G35530	Predicted Affinity Capture-MS	FSW = 0.0055	Unknown	40S RIBOSOMAL PROTEIN S3 (RPS3C)
AT2G44950	Predicted Phenotypic Suppression	FSW = 0.1282	Unknown	HUB1 (HISTONE MONO-UBIQUITINATION 1) PROTEIN BINDING / PROTEIN HOMODIMERIZATION/ UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT4G15940	Predicted two hybrid	FSW = 0.0175	Unknown	FUMARYLACETOACETATE HYDROLASE FAMILY PROTEIN
AT1G72330	Predicted Synthetic Lethality	FSW = 0.0376	Unknown	ALAAT2 (ALANINE AMINOTRANSFERASE 2) ATP BINDING / L-ALANINE2-OXOGLUTARATE AMINOTRANSFERASE
AT3G14270	Predicted interaction prediction	FSW = 0.0386	Unknown	PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE FAMILY PROTEIN
AT5G66020	Predicted Phenotypic Suppression	FSW = 0.0609	Unknown	ATSAC1B (SUPPRESSOR OF ACTIN 1B) PHOSPHATIDYLINOSITOL-45-BISPHOSPHATE 5-PHOSPHATASE
AT1G14690	Predicted Synthetic Lethality	FSW = 0.1633	Unknown	MAP65-7 (MICROTUBULE-ASSOCIATED PROTEIN 65-7)
AT3G47690	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality	FSW = 0.2333	Unknown	ATEB1A MICROTUBULE BINDING
AT1G57550	Predicted Synthetic Lethality	FSW = 0.0527	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT5G41480	Predicted Affinity Capture-MS	FSW = 0.0094	Unknown	GLA1 (GLOBULAR ARREST1) DIHYDROFOLATE SYNTHASE
AT3G25980	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Co-expression	FSW = 0.1620	Unknown	MITOTIC SPINDLE CHECKPOINT PROTEIN PUTATIVE (MAD2)
AT5G19910	Predicted Phenotypic Suppression	FSW = 0.1363	Unknown	SOH1 FAMILY PROTEIN
AT2G36200	Predicted interaction prediction Synthetic Lethality Synthetic Lethality	FSW = 0.2608	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT3G22480	Predicted two hybrid Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Phenotypic Suppression interologs mapping interaction prediction Enriched domain pair Co-expression	FSW = 0.5125	Unknown	PREFOLDIN-RELATED KE2 FAMILY PROTEIN
AT1G29990	Predicted interaction prediction two hybrid two hybrid Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS two hybrid Co-purification Phenotypic Suppression interologs mapping Enriched domain pair Co-expression	FSW = 0.5557	Unknown	PDF6 (PREFOLDIN 6) UNFOLDED PROTEIN BINDING
AT1G04730	Predicted interaction prediction Synthetic Lethality synthetic growth defect Phenotypic Enhancement Co-expression	FSW = 0.1750	Unknown	AAA-TYPE ATPASE FAMILY PROTEIN
AT1G05910	Predicted Synthetic Lethality interaction prediction	FSW = 0.1194	Unknown	CELL DIVISION CYCLE PROTEIN 48-RELATED / CDC48-RELATED
AT1G08780	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Phenotypic Suppression interologs mapping interaction prediction Co-expression	FSW = 0.6053	Unknown	AIP3 (ABI3-INTERACTING PROTEIN 3) UNFOLDED PROTEIN BINDING
AT1G20610	Predicted Synthetic Lethality interaction prediction	FSW = 0.0248	Unknown	CYCB23 (CYCLIN B23) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G21710	Predicted Phenotypic Enhancement	FSW = 0.0101	Unknown	OGG1 (8-OXOGUANINE-DNA GLYCOSYLASE 1) OXIDIZED PURINE BASE LESION DNA N-GLYCOSYLASE
AT1G23260	Predicted Synthetic Lethality interaction prediction	FSW = 0.0902	Unknown	MMZ1 (MMS ZWEI HOMOLOGUE 1) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT1G29150	Predicted Phenotypic Suppression	FSW = 0.0903	Unknown	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)
AT1G49540	Predicted Phenotypic Enhancement	FSW = 0.0851	Unknown	NUCLEOTIDE BINDING
AT1G52740	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1835	Unknown	HTA9 (HISTONE H2A PROTEIN 9) DNA BINDING
AT1G55915	Predicted Synthetic Lethality interaction prediction	FSW = 0.0515	Unknown	ZINC ION BINDING
AT1G61040	Predicted Phenotypic Suppression	FSW = 0.1443	Unknown	VIP5 (VERNALIZATION INDEPENDENCE 5) DNA BINDING
AT1G71790	Predicted Synthetic Lethality interaction prediction	FSW = 0.0151	Unknown	F-ACTIN CAPPING PROTEIN BETA SUBUNIT FAMILY PROTEIN
AT1G79890	Predicted interaction prediction Synthetic Lethality Phenotypic Enhancement	FSW = 0.1970	Unknown	HELICASE-RELATED
AT2G11000	Predicted Synthetic Lethality interaction prediction	FSW = 0.0695	Unknown	ATMAK10 ACETYLTRANSFERASE
AT2G17790	Predicted Synthetic Lethality	FSW = 0.0514	Unknown	VPS35A (VPS35 HOMOLOG A)
AT2G22400	Predicted Synthetic Lethality interaction prediction Co-expression	FSW = 0.0582	Unknown	NOL1/NOP2/SUN FAMILY PROTEIN
AT2G28390	Predicted Synthetic Lethality interaction prediction	FSW = 0.0474	Unknown	SAND FAMILY PROTEIN
AT2G29210	Predicted Synthetic Lethality	FSW = 0.0429	Unknown	SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN
AT2G30410	Predicted interaction prediction Synthetic Lethality interologs mapping Phenotypic Enhancement	FSW = 0.1590	Unknown	KIS (KIESEL) UNFOLDED PROTEIN BINDING
AT2G32850	Predicted Synthetic Lethality interaction prediction	FSW = 0.0217	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT2G33560	Predicted Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.0956	Unknown	SPINDLE CHECKPOINT PROTEIN-RELATED
AT2G38130	Predicted Synthetic Lethality interaction prediction	FSW = 0.0605	Unknown	ATMAK3 N-ACETYLTRANSFERASE
AT2G44580	Predicted interaction prediction Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.2212	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT2G45695	Predicted Synthetic Lethality	FSW = 0.0553	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN CONTAINS INTERPRO DOMAIN/S UBIQUITIN RELATED MODIFIER 1 (INTERPROIPR015221) UBIQUITIN-RELATED MODIFIER 1 (INTERPROIPR017188) MOLYBDOPTERIN SYNTHASE/THIAMIN BIOSYNTHESIS SULPHUR CARRIER BETA-GRASP (INTERPROIPR016155) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT3G611131) HAS 238 BLAST HITS TO 238 PROTEINS IN 125 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 93 FUNGI - 72 PLANTS - 18 VIRUSES - 0 OTHER EUKARYOTES - 55 (SOURCE NCBI BLINK)
AT3G05540	Predicted Affinity Capture-MS	FSW = 0.0144	Unknown	INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CYTOPLASM CONTAINS INTERPRO DOMAIN/S TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN (INTERPROIPR018105) TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR001983) MSS4/TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR011323) TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN CONSERVED SITE (INTERPROIPR018103) MSS4-LIKE (INTERPROIPR011057) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) (TAIRAT3G166401) HAS 640 BLAST HITS TO 640 PROTEINS IN 231 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 343 FUNGI - 110 PLANTS - 105 VIRUSES - 0 OTHER EUKARYOTES - 82 (SOURCE NCBI BLINK)
AT3G20800	Predicted Synthetic Lethality interaction prediction	FSW = 0.0642	Unknown	RCD1-LIKE CELL DIFFERENTIATION PROTEIN PUTATIVE
AT3G21060	Predicted Phenotypic Suppression	FSW = 0.1348	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G22142	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1098	Unknown	STRUCTURAL CONSTITUENT OF CELL WALL
AT3G22590	Predicted Phenotypic Suppression	FSW = 0.1287	Unknown	RNA POL II ACCESSORY FACTOR CDC73 FAMILY PROTEIN
AT3G42660	Predicted interaction prediction Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.2792	Unknown	NUCLEOTIDE BINDING
AT3G47810	Predicted Synthetic Lethality interaction prediction	FSW = 0.0842	Unknown	MAG1 (MAIGO 1) HYDROLASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT3G49880	Predicted interologs mapping	FSW = 0.0132	Unknown	GLYCOSYL HYDROLASE FAMILY PROTEIN 43
AT3G50960	Predicted Synthetic Lethality interaction prediction	FSW = 0.0755	Unknown	PLP3A (PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG) BETA-TUBULIN BINDING
AT3G59020	Predicted Affinity Capture-MS	FSW = 0.0082	Unknown	BINDING / PROTEIN TRANSPORTER
AT4G08500	Predicted Synthetic Lethality	FSW = 0.0247	Unknown	MEKK1 (MAP KINASE KINASE KINASE 1) DNA BINDING / MAP KINASE KINASE KINASE/ KINASE/ KINASE BINDING / PROTEIN BINDING
AT4G15930	Predicted interaction prediction Synthetic Lethality	FSW = 0.0694	Unknown	MICROTUBULE MOTOR
AT4G27180	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.2386	Unknown	ATK2 (ARABIDOPSIS THALIANA KINESIN 2) MICROTUBULE BINDING / MICROTUBULE MOTOR
AT4G27640	Predicted Synthetic Lethality interaction prediction	FSW = 0.0092	Unknown	IMPORTIN BETA-2 SUBUNIT FAMILY PROTEIN
AT4G33240	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1517	Unknown	1-PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE/ ATP BINDING / PHOSPHATIDYLINOSITOL PHOSPHATE KINASE/ PROTEIN BINDING / ZINC ION BINDING
AT4G38630	Predicted Phenotypic Suppression	FSW = 0.0838	Unknown	RPN10 (REGULATORY PARTICLE NON-ATPASE 10) PEPTIDE RECEPTOR
AT4G39050	Predicted Synthetic Lethality	FSW = 0.1273	Unknown	KINESIN-RELATED PROTEIN (MKRP2)
AT5G02310	Predicted Phenotypic Suppression	FSW = 0.0563	Unknown	PRT6 (PROTEOLYSIS 6) UBIQUITIN-PROTEIN LIGASE
AT5G10260	Predicted Phenotypic Suppression	FSW = 0.1495	Unknown	ATRABH1E (ARABIDOPSIS RAB GTPASE HOMOLOG H1E) GTP BINDING
AT5G19150	Predicted Affinity Capture-Western	FSW = 0.0100	Unknown	CARBOHYDRATE KINASE FAMILY
AT5G19820	Predicted Affinity Capture-MS Affinity Capture-Western interologs mapping	FSW = 0.0209	Unknown	EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT1G55300	Predicted Phenotypic Enhancement	FSW = 0.0073	Unknown	TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT2G44150	Predicted Synthetic Lethality Synthetic Lethality interaction prediction	FSW = 0.1464	Unknown	ASHH3 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3) HISTONE-LYSINE N-METHYLTRANSFERASE
AT3G02820	Predicted Synthetic Lethality synthetic growth defect interaction prediction	FSW = 0.1734	Unknown	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN
AT3G25100	Predicted Synthetic Lethality	FSW = 0.0879	Unknown	CDC45 (CELL DIVISION CYCLE 45)
AT3G26020	Predicted Phenotypic Enhancement	FSW = 0.1626	Unknown	SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B PUTATIVE
AT3G55380	Predicted Phenotypic Enhancement	FSW = 0.0236	Unknown	UBC14 (UBIQUITIN-CONJUGATING ENZYME 14) UBIQUITIN-PROTEIN LIGASE
AT5G09740	Predicted synthetic growth defect	FSW = 0.1613	Unknown	HAM2 (HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2) H3/H4 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE/ NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G13780	Predicted synthetic growth defect Co-expression	FSW = 0.1503	Unknown	GCN5-RELATED N-ACETYLTRANSFERASE PUTATIVE
AT5G45600	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.3072	Unknown	GAS41 PROTEIN BINDING
AT5G49510	Predicted interaction prediction Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Phenotypic Suppression interologs mapping Co-expression	FSW = 0.5738	Unknown	PDF3 (PREFOLDIN 3) UNFOLDED PROTEIN BINDING
AT5G55310	Predicted Phenotypic Suppression	FSW = 0.0188	Unknown	TOP1BETA (DNA TOPOISOMERASE 1 BETA) DNA TOPOISOMERASE TYPE I
AT5G61150	Predicted Phenotypic Suppression	FSW = 0.1160	Unknown	VIP4 (VERNALIZATION INDEPENDENCE 4) PROTEIN BINDING
AT5G48120	Predicted Phenotypic Suppression	FSW = 0.1410	Unknown	BINDING
AT5G55130	Predicted Synthetic Lethality interaction prediction Co-expression	FSW = 0.0503	Unknown	CNX5 (CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 5) MO-MOLYBDOPTERIN COFACTOR SULFURASE
AT5G67320	Predicted Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.1449	Unknown	HOS15 (HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 15)
AT1G16330	Predicted Synthetic Lethality	FSW = 0.0448	Unknown	CYCB31 (CYCLIN B31) CYCLIN-DEPENDENT PROTEIN KINASE
AT2G18990	Predicted Synthetic Lethality	FSW = 0.0605	Unknown	TXND9 (THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG)
AT1G71010	Predicted Synthetic Lethality	FSW = 0.1011	Unknown	PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE FAMILY PROTEIN
AT1G09000	Predicted Synthetic Lethality	FSW = 0.0248	Unknown	ANP1 (ARABIDOPSIS NPK1-RELATED PROTEIN KINASE 1) MAP KINASE KINASE KINASE/ KINASE
AT1G75850	Predicted Synthetic Lethality	FSW = 0.0450	Unknown	VPS35B (VPS35 HOMOLOG B)
AT5G16270	Predicted Synthetic Lethality	FSW = 0.0962	Unknown	SYN4 (SISTER CHROMATID COHESION 1 PROTEIN 4)
AT2G18000	Predicted Synthetic Lethality	FSW = 0.1532	Unknown	TAF14 (TBP-ASSOCIATED FACTOR 14)
AT3G16700	Predicted two hybrid	FSW = 0.0239	Unknown	FUMARYLACETOACETATE HYDROLASE FAMILY PROTEIN
AT5G54670	Predicted interaction prediction	FSW = 0.1855	Unknown	ATK3 (ARABIDOPSIS THALIANA KINESIN 3) ATPASE/ MICROTUBULE BINDING / MICROTUBULE MOTOR
AT2G38905	Predicted interaction prediction	FSW = 0.0693	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT1G54960	Predicted interaction prediction	FSW = 0.0273	Unknown	ANP2 MAP KINASE KINASE KINASE/ KINASE
AT3G51310	Predicted interaction prediction	FSW = 0.0450	Unknown	VPS35C (VPS35 HOMOLOG C)
AT4G37280	Predicted interaction prediction	FSW = 0.0781	Unknown	MRG FAMILY PROTEIN

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT5G23290 - ( PDF5 (PREFOLDIN 5) unfolded protein binding )

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