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AT5G23630 - ( ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase familiy protein )

98 Proteins interacs with AT5G23630

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT5G61790	Predicted Phenotypic Enhancement	FSW = 0.1257	Class C: plasma membrane endoplasmic reticulum	CALNEXIN 1 (CNX1)
AT1G77510	Predicted Phenotypic Enhancement	FSW = 0.0704	Class C: plasma membrane endoplasmic reticulum	ATPDIL1-2 (PDI-LIKE 1-2) PROTEIN DISULFIDE ISOMERASE
AT5G66680	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1975	Class C: plasma membrane endoplasmic reticulum	DGL1 DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE-PROTEIN GLYCOTRANSFERASE
AT4G19640	Predicted interologs mapping	FSW = 0.0715	Class C: plasma membrane endoplasmic reticulum	ARA7 GTP BINDING
AT1G79940	Predicted interologs mapping	FSW = 0.1112	Class C: plasma membrane endoplasmic reticulum	ATERDJ2A HEAT SHOCK PROTEIN BINDING / UNFOLDED PROTEIN BINDING
AT1G09210	Predicted interologs mapping	FSW = 0.1674	Class C: plasma membrane endoplasmic reticulum	CALRETICULIN 2 (CRT2)
AT1G11890	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.2860	Class C: plasma membrane endoplasmic reticulum	SEC22 TRANSPORTER
AT4G21180	Predicted Phenotypic Enhancement	FSW = 0.0917	Class C: plasma membrane endoplasmic reticulum	ATERDJ2B HEAT SHOCK PROTEIN BINDING / UNFOLDED PROTEIN BINDING
AT1G07670	Predicted Phenotypic Enhancement Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1773	Class C: plasma membrane endoplasmic reticulum	CALCIUM-TRANSPORTING ATPASE
AT1G11680	Predicted Synthetic Lethality	FSW = 0.0275	Class C: plasma membrane endoplasmic reticulum	CYP51G1 (CYTOCHROME P450 51G1) OXYGEN BINDING / STEROL 14-DEMETHYLASE
AT3G02520	Predicted Phenotypic Enhancement	FSW = 0.0386	Class C: plasma membrane	GRF7 (GENERAL REGULATORY FACTOR 7) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G08560	Predicted interologs mapping	FSW = 0.0473	Class C: plasma membrane	SYP111 (SYNTAXIN OF PLANTS 111) SNAP RECEPTOR
AT3G03800	Predicted Phenotypic Suppression	FSW = 0.0638	Class C: plasma membrane	SYP131 (SYNTAXIN OF PLANTS 131) SNAP RECEPTOR
AT3G57340	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0264	Class C: plasma membrane	DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT5G60640	Predicted interologs mapping	FSW = 0.0430	Class C: endoplasmic reticulum	ATPDIL1-4 (PDI-LIKE 1-4) PROTEIN DISULFIDE ISOMERASE
AT5G45130	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1349	Class C: endoplasmic reticulum	RHA1 (RAB HOMOLOG 1) GTP BINDING
AT4G01320	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1972	Class C: endoplasmic reticulum	ATSTE24 ENDOPEPTIDASE/ METALLOENDOPEPTIDASE
AT1G76490	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0490	Class C: endoplasmic reticulum	HMG1 (HYDROXY METHYLGLUTARYL COA REDUCTASE 1) HYDROXYMETHYLGLUTARYL-COA REDUCTASE
AT5G63840	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.2333	Class C: endoplasmic reticulum	RSW3 (RADIAL SWELLING 3) GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT2G17520	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.2111	Class C: endoplasmic reticulum	IRE1A ENDORIBONUCLEASE/ KINASE
AT1G10130	Predicted Phenotypic Enhancement interologs mapping Phenotypic Enhancement Enriched domain pair Co-expression	FSW = 0.1643	Class C: endoplasmic reticulum	ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3) CALCIUM-TRANSPORTING ATPASE/ CALMODULIN BINDING / MANGANESE-TRANSPORTING ATPASE/ PEROXIDASE
AT1G67490	Predicted Phenotypic Enhancement	FSW = 0.1716	Class C: endoplasmic reticulum	GCS1 (GLUCOSIDASE 1) ALPHA-GLUCOSIDASE
AT1G22200	Predicted Phenotypic Enhancement	FSW = 0.0748	Class C: endoplasmic reticulum	UNKNOWN PROTEIN
AT5G66020	Predicted Phenotypic Enhancement	FSW = 0.1330	Class C: endoplasmic reticulum	ATSAC1B (SUPPRESSOR OF ACTIN 1B) PHOSPHATIDYLINOSITOL-45-BISPHOSPHATE 5-PHOSPHATASE
AT1G18260	Predicted two hybrid interaction prediction	FSW = 0.0968	Class C: endoplasmic reticulum	SUPPRESSOR OF LIN-12-LIKE PROTEIN-RELATED / SEL-1 PROTEIN-RELATED
AT3G05710	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1600	Class C: endoplasmic reticulum	SYP43 (SYNTAXIN OF PLANTS 43) SNAP RECEPTOR
AT1G01020	Predicted Phenotypic Enhancement	FSW = 0.0887	Class C: endoplasmic reticulum	ARV1
AT1G31780	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.2324	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CONSERVED OLIGOMERIC COMPLEX COG6 (INTERPROIPR010490) HAS 281 BLAST HITS TO 279 PROTEINS IN 131 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 132 FUNGI - 106 PLANTS - 21 VIRUSES - 0 OTHER EUKARYOTES - 20 (SOURCE NCBI BLINK)
AT2G45200	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.2080	Unknown	GOS12 (GOLGI SNARE 12) SNARE BINDING
AT1G64790	Predicted Phenotypic Suppression	FSW = 0.0440	Unknown	BINDING
AT3G22110	Predicted Phenotypic Enhancement	FSW = 0.0714	Unknown	PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT2G30710	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.2848	Unknown	RABGAP/TBC DOMAIN-CONTAINING PROTEIN
AT3G12780	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0267	Unknown	PGK1 (PHOSPHOGLYCERATE KINASE 1) PHOSPHOGLYCERATE KINASE
AT1G56190	Predicted Affinity Capture-MS	FSW = 0.0104	Unknown	PHOSPHOGLYCERATE KINASE PUTATIVE
AT1G08130	Predicted Phenotypic Enhancement	FSW = 0.0122	Unknown	ATLIG1 (ARABIDOPSIS THALIANA DNA LIGASE 1) ATP BINDING / DNA BINDING / DNA LIGASE (ATP)
AT2G43810	Predicted Phenotypic Enhancement	FSW = 0.0574	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN F PUTATIVE / U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN PUTATIVE / SM PROTEIN F PUTATIVE
AT1G02680	Predicted Phenotypic Enhancement	FSW = 0.0229	Unknown	TAF13 (TBP-ASSOCIATED FACTOR 13) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G55750	Predicted Phenotypic Enhancement	FSW = 0.0298	Unknown	TRANSCRIPTION FACTOR-RELATED
AT1G72050	Predicted Phenotypic Enhancement	FSW = 0.0045	Unknown	TFIIIA (TRANSCRIPTION FACTOR IIIA) 5S RDNA BINDING / 5S RRNA BINDING / NUCLEIC ACID BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING
AT3G12810	Predicted Phenotypic Suppression	FSW = 0.1135	Unknown	PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G03870	Predicted Phenotypic Enhancement	FSW = 0.0422	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT2G06210	Predicted Phenotypic Enhancement	FSW = 0.0557	Unknown	ELF8 (EARLY FLOWERING 8) BINDING
AT2G36740	Predicted Phenotypic Suppression	FSW = 0.1470	Unknown	SWC2 DNA BINDING / TRANSCRIPTION FACTOR
AT2G44950	Predicted Phenotypic Enhancement	FSW = 0.1188	Unknown	HUB1 (HISTONE MONO-UBIQUITINATION 1) PROTEIN BINDING / PROTEIN HOMODIMERIZATION/ UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT1G59900	Predicted Phenotypic Suppression	FSW = 0.0462	Unknown	AT-E1 ALPHA OXIDOREDUCTASE ACTING ON THE ALDEHYDE OR OXO GROUP OF DONORS DISULFIDE AS ACCEPTOR / PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING)
AT1G75510	Predicted Phenotypic Enhancement	FSW = 0.0797	Unknown	TRANSCRIPTION INITIATION FACTOR IIF BETA SUBUNIT (TFIIF-BETA) FAMILY PROTEIN
AT2G13650	Predicted Phenotypic Enhancement	FSW = 0.0367	Unknown	GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT1G07290	Predicted interologs mapping	FSW = 0.1667	Unknown	NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT5G38460	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1880	Unknown	ALG6 ALG8 GLYCOSYLTRANSFERASE FAMILY PROTEIN
AT4G39220	Predicted Phenotypic Enhancement	FSW = 0.2071	Unknown	ATRER1A
AT2G31300	Predicted Synthetic Lethality interaction prediction	FSW = 0.1073	Unknown	ARPC1B (ACTIN-RELATED PROTEIN C1B) ACTIN BINDING / NUCLEOTIDE BINDING
AT2G30910	Predicted Synthetic Lethality	FSW = 0.0833	Unknown	ARPC1A (ACTIN-RELATED PROTEIN C1A) ACTIN BINDING / NUCLEOTIDE BINDING
AT1G08750	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1457	Unknown	GPI-ANCHOR TRANSAMIDASE PUTATIVE
AT1G08780	Predicted interologs mapping Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1112	Unknown	AIP3 (ABI3-INTERACTING PROTEIN 3) UNFOLDED PROTEIN BINDING
AT1G26450	Predicted Phenotypic Enhancement	FSW = 0.2168	Unknown	BETA-13-GLUCANASE-RELATED
AT1G69640	Predicted Phenotypic Enhancement	FSW = 0.1372	Unknown	SBH1 (SPHINGOID BASE HYDROXYLASE 1) CATALYTIC/ SPHINGOSINE HYDROXYLASE
AT1G79730	Predicted Phenotypic Enhancement	FSW = 0.0989	Unknown	ELF7 (EARLY FLOWERING 7)
AT2G22530	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.2254	Unknown	CATALYTIC/ TRANSFERASE
AT2G34770	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.2773	Unknown	FAH1 (FATTY ACID HYDROXYLASE 1) CATALYTIC/ FATTY ACID ALPHA-HYDROXYLASE
AT3G10070	Predicted Phenotypic Enhancement	FSW = 0.0374	Unknown	TAF12 (TBP-ASSOCIATED FACTOR 12) DNA BINDING / TRANSCRIPTION INITIATION FACTOR
AT3G49660	Predicted Synthetic Lethality	FSW = 0.0240	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT4G17890	Predicted Phenotypic Enhancement	FSW = 0.0698	Unknown	AGD8 (ARF-GAP DOMAIN 8) ARF GTPASE ACTIVATOR/ DNA BINDING / ZINC ION BINDING
AT1G01910	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0929	Unknown	ANION-TRANSPORTING ATPASE PUTATIVE
AT1G02145	Predicted Phenotypic Enhancement	FSW = 0.1364	Unknown	TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G16560	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.3260	Unknown	PER1-LIKE FAMILY PROTEIN
AT1G29990	Predicted Synthetic Lethality interaction prediction	FSW = 0.0699	Unknown	PDF6 (PREFOLDIN 6) UNFOLDED PROTEIN BINDING
AT1G32130	Predicted Phenotypic Enhancement	FSW = 0.0517	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TFIIS N-TERMINAL (INTERPROIPR017923) IWS1 C-TERMINAL (INTERPROIPR008654) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS IWS1 C-TERMINUS FAMILY PROTEIN (TAIRAT4G190001) HAS 907 BLAST HITS TO 871 PROTEINS IN 182 SPECIES ARCHAE - 4 BACTERIA - 14 METAZOA - 417 FUNGI - 195 PLANTS - 42 VIRUSES - 8 OTHER EUKARYOTES - 227 (SOURCE NCBI BLINK)
AT1G32750	Predicted Phenotypic Enhancement	FSW = 0.0229	Unknown	HAF01 DNA BINDING / HISTONE ACETYLTRANSFERASE
AT1G54390	Predicted Phenotypic Enhancement	FSW = 0.0692	Unknown	PHD FINGER PROTEIN-RELATED
AT1G57600	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.3033	Unknown	MEMBRANE BOUND O-ACYL TRANSFERASE (MBOAT) FAMILY PROTEIN
AT1G73570	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0732	Unknown	SUPPRESSOR OF LIN-12-LIKE PROTEIN-RELATED / SEL-1 PROTEIN-RELATED
AT2G02760	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.0655	Unknown	ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2) UBIQUITIN-PROTEIN LIGASE
AT2G28390	Predicted Phenotypic Enhancement	FSW = 0.0769	Unknown	SAND FAMILY PROTEIN
AT3G12180	Predicted Phenotypic Enhancement	FSW = 0.2130	Unknown	CORNICHON FAMILY PROTEIN
AT3G22142	Predicted Phenotypic Enhancement	FSW = 0.1285	Unknown	STRUCTURAL CONSTITUENT OF CELL WALL
AT3G22590	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.1077	Unknown	RNA POL II ACCESSORY FACTOR CDC73 FAMILY PROTEIN
AT3G27000	Predicted Synthetic Lethality interaction prediction	FSW = 0.0314	Unknown	ARP2 (ACTIN RELATED PROTEIN 2) PROTEIN BINDING / STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT3G53510	Predicted Affinity Capture-MS	FSW = 0.0077	Unknown	ABC TRANSPORTER FAMILY PROTEIN
AT4G26550	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1000	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SFT2-LIKE (INTERPROIPR011691) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G560201) HAS 452 BLAST HITS TO 452 PROTEINS IN 136 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 198 FUNGI - 89 PLANTS - 61 VIRUSES - 0 OTHER EUKARYOTES - 104 (SOURCE NCBI BLINK)
AT4G33240	Predicted Phenotypic Enhancement	FSW = 0.1020	Unknown	1-PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE/ ATP BINDING / PHOSPHATIDYLINOSITOL PHOSPHATE KINASE/ PROTEIN BINDING / ZINC ION BINDING
AT5G10260	Predicted Phenotypic Enhancement	FSW = 0.2018	Unknown	ATRABH1E (ARABIDOPSIS RAB GTPASE HOMOLOG H1E) GTP BINDING
AT5G22840	Predicted Phenotypic Enhancement	FSW = 0.0202	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT5G23290	Predicted Synthetic Lethality interaction prediction	FSW = 0.0729	Unknown	PDF5 (PREFOLDIN 5) UNFOLDED PROTEIN BINDING
AT5G27970	Predicted Phenotypic Enhancement	FSW = 0.1891	Unknown	BINDING
AT5G42000	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1885	Unknown	ORMDL FAMILY PROTEIN
AT5G46030	Predicted Phenotypic Suppression	FSW = 0.0600	Unknown	UNKNOWN PROTEIN
AT5G49510	Predicted Synthetic Lethality interaction prediction	FSW = 0.0795	Unknown	PDF3 (PREFOLDIN 3) UNFOLDED PROTEIN BINDING
AT5G63610	Predicted Phenotypic Enhancement	FSW = 0.0323	Unknown	CDKE1 (CYCLIN-DEPENDENT KINASE E1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT2G35210	Predicted interologs mapping	FSW = 0.0616	Unknown	RPA (ROOT AND POLLEN ARFGAP) ARF GTPASE ACTIVATOR/ DNA BINDING / ZINC ION BINDING
AT1G12340	Predicted interologs mapping	FSW = 0.1712	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN INTRACELLULAR SIGNALING CASCADE LOCATED IN MEMBRANE EXPRESSED IN MALE GAMETOPHYTE POLLEN TUBE EXPRESSED DURING L MATURE POLLEN STAGE M GERMINATED POLLEN STAGE CONTAINS INTERPRO DOMAIN/S CORNICHON (INTERPROIPR003377) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS CORNICHON FAMILY PROTEIN (TAIRAT1G123901) HAS 463 BLAST HITS TO 463 PROTEINS IN 125 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 278 FUNGI - 110 PLANTS - 41 VIRUSES - 0 OTHER EUKARYOTES - 34 (SOURCE NCBI BLINK)
AT1G09080	Predicted interologs mapping	FSW = 0.0750	Unknown	BIP3 ATP BINDING
AT1G24320	Predicted interologs mapping	FSW = 0.1631	Unknown	ALPHA-GLUCOSIDASE PUTATIVE
AT1G14230	Predicted interologs mapping	FSW = 0.0566	Unknown	NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN / GDA1/CD39 FAMILY PROTEIN
AT2G18240	Predicted interologs mapping	FSW = 0.1974	Unknown	RER1 PROTEIN PUTATIVE
AT1G09460	Predicted interologs mapping	FSW = 0.1610	Unknown	GLUCAN ENDO-13-BETA-GLUCOSIDASE-RELATED
AT1G14290	Predicted interologs mapping	FSW = 0.1189	Unknown	SBH2 (SPHINGOID BASE HYDROXYLASE 2) CATALYTIC/ SPHINGOSINE HYDROXYLASE
AT1G14400	Predicted synthetic growth defect	FSW = 0.0203	Unknown	UBC1 (UBIQUITIN CARRIER PROTEIN 1) UBIQUITIN-PROTEIN LIGASE
AT3G54630	Predicted interaction prediction	FSW = 0.0132	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 11 PLANT STRUCTURES EXPRESSED DURING 6 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S KINETOCHORE PROTEIN NDC80 (INTERPROIPR005550) HAS 19800 BLAST HITS TO 12108 PROTEINS IN 845 SPECIES ARCHAE - 345 BACTERIA - 1709 METAZOA - 11031 FUNGI - 1499 PLANTS - 797 VIRUSES - 39 OTHER EUKARYOTES - 4380 (SOURCE NCBI BLINK)

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

AtPIN will be upgraded. Please send your suggestions here

AT5G23630 - ( ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase familiy protein )

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