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AT5G10260 - ( AtRABH1e (Arabidopsis Rab GTPase homolog H1e) GTP binding )

205 Proteins interacs with AT5G10260

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT1G78900	Predicted Phenotypic Enhancement	FSW = 0.0463	Unknown	VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A) ATP BINDING / HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT4G39080	Predicted two hybrid two hybrid	FSW = 0.0203	Unknown	VHA-A3 (VACUOLAR PROTON ATPASE A3) ATPASE
AT5G41790	Predicted Synthetic Lethality	FSW = 0.0304	Unknown	CIP1 (COP1-INTERACTIVE PROTEIN 1) PROTEIN BINDING
AT4G19640	Predicted Phylogenetic profile method	FSW = 0.1002	Unknown	ARA7 GTP BINDING
AT1G02130	Predicted interologs mapping	FSW = 0.1229	Unknown	ARA-5 (ARABIDOPSIS RAS 5) GTP BINDING
AT1G19910	Predicted Synthetic Lethality	FSW = 0.0206	Unknown	AVA-P2 ATPASE/ PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT4G02620	Predicted Synthetic Lethality	FSW = 0.0457	Unknown	VACUOLAR ATPASE SUBUNIT F FAMILY PROTEIN
AT3G58730	Predicted Synthetic Lethality	FSW = 0.0386	Unknown	VACUOLAR ATP SYNTHASE SUBUNIT D (VATD) / V-ATPASE D SUBUNIT / VACUOLAR PROTON PUMP D SUBUNIT (VATPD)
AT2G44610	Predicted Phylogenetic profile method	FSW = 0.4893	Unknown	RAB6A GTP BINDING / PROTEIN BINDING
AT5G47520	Predicted Gene neighbors method Phylogenetic profile method	FSW = 0.1052	Unknown	ATRABA5A (ARABIDOPSIS RAB GTPASE HOMOLOG A5A) GTP BINDING
AT4G17170	Predicted Phylogenetic profile method	FSW = 0.1233	Unknown	RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C) GTP BINDING / GTPASE
AT1G16920	Predicted Phylogenetic profile method	FSW = 0.1491	Unknown	ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B) GTP BINDING
AT1G31780	Predicted Synthetic Lethality	FSW = 0.1159	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CONSERVED OLIGOMERIC COMPLEX COG6 (INTERPROIPR010490) HAS 281 BLAST HITS TO 279 PROTEINS IN 131 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 132 FUNGI - 106 PLANTS - 21 VIRUSES - 0 OTHER EUKARYOTES - 20 (SOURCE NCBI BLINK)
AT2G45200	Predicted Synthetic Lethality interologs mapping	FSW = 0.1051	Unknown	GOS12 (GOLGI SNARE 12) SNARE BINDING
AT5G45130	Predicted Synthetic Lethality Gene neighbors method Phylogenetic profile method	FSW = 0.2189	Unknown	RHA1 (RAB HOMOLOG 1) GTP BINDING
AT5G19740	Predicted Phenotypic Enhancement	FSW = 0.0797	Unknown	PEPTIDASE M28 FAMILY PROTEIN
AT1G30470	Predicted Phenotypic Suppression	FSW = 0.0206	Unknown	SIT4 PHOSPHATASE-ASSOCIATED FAMILY PROTEIN
AT1G55190	Predicted two hybrid Affinity Capture-Western	FSW = 0.0869	Unknown	PRA7
AT1G64790	Predicted Phenotypic Enhancement	FSW = 0.1213	Unknown	BINDING
AT1G79590	Predicted Synthetic Lethality	FSW = 0.0614	Unknown	SYP52 (SYNTAXIN OF PLANTS 52) SNAP RECEPTOR
AT4G04910	Predicted Synthetic Lethality	FSW = 0.0311	Unknown	NSF (N-ETHYLMALEIMIDE SENSITIVE FACTOR) ATP BINDING / BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT2G46560	Predicted Synthetic Lethality	FSW = 0.0357	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G30710	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1015	Unknown	RABGAP/TBC DOMAIN-CONTAINING PROTEIN
AT3G22110	Predicted Phenotypic Suppression	FSW = 0.0969	Unknown	PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT5G13710	Predicted Phenotypic Enhancement	FSW = 0.1012	Unknown	SMT1 (STEROL METHYLTRANSFERASE 1) STEROL 24-C-METHYLTRANSFERASE
AT2G21880	Predicted Phylogenetic profile method	FSW = 0.0857	Unknown	ATRAB7A GTP BINDING
AT5G26240	Predicted Synthetic Lethality	FSW = 0.0383	Unknown	CLC-D (CHLORIDE CHANNEL D) ANION CHANNEL/ VOLTAGE-GATED CHLORIDE CHANNEL
AT5G58060	Predicted interologs mapping	FSW = 0.0582	Unknown	YKT61
AT3G63130	Predicted Affinity Capture-MS	FSW = 0.0042	Unknown	RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1) RAN GTPASE ACTIVATOR/ PROTEIN BINDING
AT5G20290	Predicted two hybrid two hybrid	FSW = 0.0037	Unknown	40S RIBOSOMAL PROTEIN S8 (RPS8A)
AT5G67630	Predicted Phenotypic Enhancement	FSW = 0.0722	Unknown	DNA HELICASE PUTATIVE
AT5G22330	Predicted Phenotypic Enhancement	FSW = 0.0457	Unknown	RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1) PROTEIN BINDING
AT5G16630	Predicted Synthetic Lethality	FSW = 0.0699	Unknown	RAD4 DAMAGED DNA BINDING
AT2G28190	Predicted Phenotypic Suppression	FSW = 0.1050	Unknown	CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2) SUPEROXIDE DISMUTASE
AT2G17265	Predicted Phenotypic Enhancement	FSW = 0.0237	Unknown	HSK (HOMOSERINE KINASE) HOMOSERINE KINASE
AT1G12520	Predicted Phenotypic Suppression	FSW = 0.1276	Unknown	ATCCS (COPPER CHAPERONE FOR SOD1) SUPEROXIDE DISMUTASE/ SUPEROXIDE DISMUTASE COPPER CHAPERONE
AT5G63110	Predicted Phenotypic Suppression	FSW = 0.1366	Unknown	HDA6 (HISTONE DEACETYLASE 6) HISTONE DEACETYLASE
AT4G35860	Predicted Phylogenetic profile method	FSW = 0.1274	Unknown	ATGB2 (GTP-BINDING 2) GTP BINDING
AT5G56030	Predicted Affinity Capture-MS	FSW = 0.0379	Unknown	HSP81-2 (HEAT SHOCK PROTEIN 81-2) ATP BINDING
AT5G12250	Predicted Synthetic Lethality	FSW = 0.0078	Unknown	TUB6 (BETA-6 TUBULIN) STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT3G16100	Predicted Synthetic Lethality	FSW = 0.1071	Unknown	ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C) GTP BINDING
AT1G73230	Predicted Synthetic Lethality	FSW = 0.0135	Unknown	NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX (NAC) DOMAIN-CONTAINING PROTEIN
AT3G12110	Predicted Phenotypic Enhancement	FSW = 0.0900	Unknown	ACT11 (ACTIN-11) STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT4G35830	Predicted Affinity Capture-MS	FSW = 0.0148	Unknown	ACONITATE HYDRATASE CYTOPLASMIC / CITRATE HYDRO-LYASE / ACONITASE (ACO)
AT5G23630	Predicted Phenotypic Enhancement	FSW = 0.2018	Unknown	ATPASE E1-E2 TYPE FAMILY PROTEIN / HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILIY PROTEIN
AT5G52640	Predicted Affinity Capture-MS Synthetic Lethality synthetic growth defect	FSW = 0.1015	Unknown	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT1G08820	Predicted Synthetic Lethality	FSW = 0.0377	Unknown	VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2) STRUCTURAL MOLECULE
AT3G53610	Predicted Phylogenetic profile method	FSW = 0.1301	Unknown	ATRAB8 GTP BINDING
AT1G28550	Predicted Phylogenetic profile method	FSW = 0.1052	Unknown	ATRABA1I (ARABIDOPSIS RAB GTPASE HOMOLOG A1I) GTP BINDING
AT3G18524	Predicted Phenotypic Suppression	FSW = 0.0491	Unknown	MSH2 (MUTS HOMOLOG 2) ATP BINDING / DAMAGED DNA BINDING / MISMATCHED DNA BINDING / PROTEIN BINDING
AT1G07410	Predicted Phylogenetic profile method	FSW = 0.1200	Unknown	ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B) GTP BINDING / GTPASE/ PROTEIN BINDING
AT1G06400	Predicted Phylogenetic profile method	FSW = 0.1061	Unknown	ARA-2 GTP BINDING
AT4G18430	Predicted Phylogenetic profile method	FSW = 0.1655	Unknown	ATRABA1E (ARABIDOPSIS RAB GTPASE HOMOLOG A1E) GTP BINDING
AT1G57720	Predicted Synthetic Lethality	FSW = 0.0224	Unknown	ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE
AT4G18800	Predicted Phylogenetic profile method	FSW = 0.0574	Unknown	ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D) GTP BINDING
AT5G19180	Predicted Phenotypic Suppression	FSW = 0.0603	Unknown	ECR1 (E1 C-TERMINAL RELATED 1) NEDD8 ACTIVATING ENZYME/ PROTEIN HETERODIMERIZATION/ SMALL PROTEIN ACTIVATING ENZYME
AT2G15240	Predicted Synthetic Lethality	FSW = 0.0383	Unknown	UNC-50 FAMILY PROTEIN
AT2G44680	Predicted Phenotypic Enhancement	FSW = 0.1435	Unknown	CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE
AT5G67270	Predicted Synthetic Lethality	FSW = 0.1074	Unknown	ATEB1C (MICROTUBULE END BINDING PROTEIN 1) MICROTUBULE BINDING
AT1G21700	Predicted Phenotypic Suppression	FSW = 0.0422	Unknown	ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C) DNA BINDING
AT3G12810	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.2381	Unknown	PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT3G44530	Predicted Phenotypic Enhancement	FSW = 0.1139	Unknown	HIRA (ARABIDOPSIS HOMOLOG OF HISTONE CHAPERONE HIRA) NUCLEOTIDE BINDING / PROTEIN BINDING
AT5G35910	Predicted Phenotypic Enhancement	FSW = 0.1338	Unknown	3-5 EXONUCLEASE DOMAIN-CONTAINING PROTEIN / HELICASE AND RNASE D C-TERMINAL DOMAIN-CONTAINING PROTEIN / HRDC DOMAIN-CONTAINING PROTEIN
AT2G43810	Predicted Phenotypic Suppression	FSW = 0.1280	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN F PUTATIVE / U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN PUTATIVE / SM PROTEIN F PUTATIVE
AT1G02680	Predicted Phenotypic Enhancement	FSW = 0.0543	Unknown	TAF13 (TBP-ASSOCIATED FACTOR 13) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR
AT3G17590	Predicted Phenotypic Suppression	FSW = 0.0513	Unknown	BSH (BUSHY GROWTH) CHROMATIN BINDING / PROTEIN BINDING
AT1G19120	Predicted Phenotypic Suppression	FSW = 0.1001	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT2G03870	Predicted Phenotypic Suppression	FSW = 0.0964	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT4G17020	Predicted Phenotypic Enhancement	FSW = 0.0139	Unknown	TRANSCRIPTION FACTOR-RELATED
AT1G03190	Predicted Phenotypic Enhancement	FSW = 0.1324	Unknown	UVH6 (ULTRAVIOLET HYPERSENSITIVE 6) ATP BINDING / ATP-DEPENDENT DNA HELICASE/ ATP-DEPENDENT HELICASE/ DNA BINDING / HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING
AT1G79830	Predicted two hybrid Affinity Capture-Western Affinity Capture-Western two hybrid Affinity Capture-Western Affinity Capture-MS	FSW = 0.0377	Unknown	GC5 (GOLGIN CANDIDATE 5) PROTEIN BINDING
AT2G47620	Predicted Phenotypic Enhancement	FSW = 0.0828	Unknown	ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING
AT2G13370	Predicted Phenotypic Enhancement	FSW = 0.0801	Unknown	CHR5 (CHROMATIN REMODELING 5) ATP BINDING / DNA BINDING / CHROMATIN BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G15430	Predicted Phenotypic Enhancement	FSW = 0.0932	Unknown	NRPB3 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT2G18760	Predicted Phenotypic Suppression	FSW = 0.0549	Unknown	CHR8 (CHROMATIN REMODELING 8) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G36740	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.2186	Unknown	SWC2 DNA BINDING / TRANSCRIPTION FACTOR
AT2G27470	Predicted Phenotypic Enhancement	FSW = 0.0464	Unknown	NF-YB11 (NUCLEAR FACTOR Y SUBUNIT B11) TRANSCRIPTION FACTOR
AT1G01040	Predicted Phenotypic Enhancement	FSW = 0.0139	Unknown	DCL1 (DICER-LIKE 1) ATP-DEPENDENT HELICASE/ DOUBLE-STRANDED RNA BINDING / PROTEIN BINDING / RIBONUCLEASE III
AT2G06210	Predicted Phenotypic Enhancement	FSW = 0.1317	Unknown	ELF8 (EARLY FLOWERING 8) BINDING
AT2G44950	Predicted Synthetic Lethality Phenotypic Enhancement synthetic growth defect	FSW = 0.2054	Unknown	HUB1 (HISTONE MONO-UBIQUITINATION 1) PROTEIN BINDING / PROTEIN HOMODIMERIZATION/ UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT1G59900	Predicted Phenotypic Suppression	FSW = 0.1234	Unknown	AT-E1 ALPHA OXIDOREDUCTASE ACTING ON THE ALDEHYDE OR OXO GROUP OF DONORS DISULFIDE AS ACCEPTOR / PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING)
AT2G22290	Predicted Phylogenetic profile method	FSW = 0.3426	Unknown	ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D) GTP BINDING
AT5G64990	Predicted Gene neighbors method Phylogenetic profile method	FSW = 0.1834	Unknown	ATRABH1A (ARABIDOPSIS RAB GTPASE HOMOLOG H1A) GTP BINDING
AT1G75510	Predicted Phenotypic Enhancement	FSW = 0.1327	Unknown	TRANSCRIPTION INITIATION FACTOR IIF BETA SUBUNIT (TFIIF-BETA) FAMILY PROTEIN
AT1G28490	Predicted Synthetic Lethality	FSW = 0.0378	Unknown	SYP61 (SYNTAXIN OF PLANTS 61) SNAP RECEPTOR
AT3G24350	Predicted Synthetic Lethality	FSW = 0.0864	Unknown	SYP32 (SYNTAXIN OF PLANTS 32) SNAP RECEPTOR
AT1G55130	Predicted Synthetic Lethality	FSW = 0.0252	Unknown	ENDOMEMBRANE PROTEIN 70 PUTATIVE
AT1G71270	Predicted Affinity Capture-Western Affinity Capture-Western Reconstituted Complex Affinity Capture-MS	FSW = 0.0742	Unknown	POK (POKY POLLEN TUBE)
AT3G54840	Predicted Phylogenetic profile method	FSW = 0.0561	Unknown	ARA6 GTP BINDING / GTPASE
AT3G59500	Predicted Reconstituted Complex	FSW = 0.0935	Unknown	INTEGRAL MEMBRANE HRF1 FAMILY PROTEIN
AT3G05710	Predicted Synthetic Lethality	FSW = 0.1051	Unknown	SYP43 (SYNTAXIN OF PLANTS 43) SNAP RECEPTOR
AT5G66020	Predicted Phenotypic Enhancement	FSW = 0.1327	Unknown	ATSAC1B (SUPPRESSOR OF ACTIN 1B) PHOSPHATIDYLINOSITOL-45-BISPHOSPHATE 5-PHOSPHATASE
AT3G06540	Predicted in vitro	FSW = 0.0400	Unknown	GDP DISSOCIATION INHIBITOR FAMILY PROTEIN / RAB GTPASE ACTIVATOR FAMILY PROTEIN
AT3G02580	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.0605	Unknown	STE1 (STEROL 1) C-5 STEROL DESATURASE
AT5G50720	Predicted Affinity Capture-Western	FSW = 0.0249	Unknown	ATHVA22E
AT4G39220	Predicted Synthetic Lethality	FSW = 0.0677	Unknown	ATRER1A
AT3G28730	Predicted Phenotypic Enhancement	FSW = 0.0403	Unknown	ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP) TRANSCRIPTION FACTOR
AT2G22310	Predicted Phenotypic Enhancement	FSW = 0.0677	Unknown	ATUBP4 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 4) UBIQUITIN-SPECIFIC PROTEASE
AT2G45790	Predicted two hybrid	FSW = 0.0219	Unknown	PMM (PHOSPHOMANNOMUTASE) PHOSPHOMANNOMUTASE
AT5G18110	Predicted two hybrid	FSW = 0.0052	Unknown	NCBP (NOVEL CAP-BINDING PROTEIN) RNA BINDING / TRANSLATION INITIATION FACTOR
AT4G10650	Predicted in vitro	FSW = 0.0128	Unknown	GTP BINDING
AT5G07110	Predicted Affinity Capture-MS two hybrid	FSW = 0.0237	Unknown	PRA1B6 (PRENYLATED RAB ACCEPTOR 1B6)
AT5G15930	Predicted two hybrid two hybrid	FSW = 0.0050	Unknown	PAM1 (PLANT ADHESION MOLECULE 1) RAB GTPASE ACTIVATOR
AT1G01910	Predicted Synthetic Lethality	FSW = 0.0608	Unknown	ANION-TRANSPORTING ATPASE PUTATIVE
AT1G04020	Predicted Synthetic Lethality	FSW = 0.1121	Unknown	BARD1 (BREAST CANCER ASSOCIATED RING 1) DNA BINDING / TRANSCRIPTION COACTIVATOR
AT1G07430	Predicted Synthetic Lethality	FSW = 0.0463	Unknown	PROTEIN PHOSPHATASE 2C PUTATIVE / PP2C PUTATIVE
AT1G08190	Predicted Synthetic Lethality	FSW = 0.0514	Unknown	VACUOLAR ASSEMBLY PROTEIN PUTATIVE (VPS41)
AT1G09020	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.0522	Unknown	SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4) PROTEIN KINASE ACTIVATOR
AT1G11930	Predicted Phenotypic Enhancement	FSW = 0.0479	Unknown	ALANINE RACEMASE FAMILY PROTEIN
AT1G16560	Predicted Synthetic Lethality	FSW = 0.0769	Unknown	PER1-LIKE FAMILY PROTEIN
AT1G23260	Predicted Phenotypic Enhancement	FSW = 0.0528	Unknown	MMZ1 (MMS ZWEI HOMOLOGUE 1) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT1G26450	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1089	Unknown	BETA-13-GLUCANASE-RELATED
AT1G32750	Predicted Phenotypic Enhancement	FSW = 0.0343	Unknown	HAF01 DNA BINDING / HISTONE ACETYLTRANSFERASE
AT1G34150	Predicted Phenotypic Enhancement	FSW = 0.1554	Unknown	TRNA PSEUDOURIDINE SYNTHASE FAMILY PROTEIN
AT1G48760	Predicted Synthetic Lethality	FSW = 0.0782	Unknown	DELTA-ADR (DELTA-ADAPTIN) BINDING / CLATHRIN BINDING / PROTEIN BINDING / PROTEIN TRANSPORTER
AT1G49980	Predicted Phenotypic Suppression	FSW = 0.0407	Unknown	DNA-DIRECTED DNA POLYMERASE/ DAMAGED DNA BINDING
AT1G51310	Predicted Phenotypic Suppression	FSW = 0.0727	Unknown	TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE
AT1G52740	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement synthetic growth defect	FSW = 0.2128	Unknown	HTA9 (HISTONE H2A PROTEIN 9) DNA BINDING
AT1G54370	Predicted Synthetic Rescue	FSW = 0.0341	Unknown	NHX5 SODIUM ION TRANSMEMBRANE TRANSPORTER/ SODIUMHYDROGEN ANTIPORTER
AT1G57600	Predicted Synthetic Lethality	FSW = 0.0792	Unknown	MEMBRANE BOUND O-ACYL TRANSFERASE (MBOAT) FAMILY PROTEIN
AT1G60970	Predicted Synthetic Lethality	FSW = 0.0234	Unknown	CLATHRIN ADAPTOR COMPLEX SMALL CHAIN FAMILY PROTEIN
AT1G61040	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1127	Unknown	VIP5 (VERNALIZATION INDEPENDENCE 5) DNA BINDING
AT1G66740	Predicted Phenotypic Enhancement	FSW = 0.1063	Unknown	SGA2
AT1G78870	Predicted Phenotypic Enhancement	FSW = 0.0255	Unknown	UBC35 (UBIQUITIN-CONJUGATING ENZYME 35) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT1G79730	Predicted Phenotypic Enhancement	FSW = 0.1624	Unknown	ELF7 (EARLY FLOWERING 7)
AT1G79990	Predicted Synthetic Lethality	FSW = 0.0623	Unknown	LOCATED IN ENDOMEMBRANE SYSTEM COPI VESICLE COAT GOLGI MEMBRANE EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SYS1 HOMOLOGUE (INTERPROIPR016973) HAS 55556 BLAST HITS TO 24059 PROTEINS IN 620 SPECIES ARCHAE - 38 BACTERIA - 5697 METAZOA - 25539 FUNGI - 10898 PLANTS - 5309 VIRUSES - 0 OTHER EUKARYOTES - 8075 (SOURCE NCBI BLINK)
AT2G02760	Predicted Phenotypic Enhancement synthetic growth defect	FSW = 0.1531	Unknown	ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2) UBIQUITIN-PROTEIN LIGASE
AT2G11000	Predicted Synthetic Lethality	FSW = 0.0570	Unknown	ATMAK10 ACETYLTRANSFERASE
AT2G17790	Predicted Synthetic Lethality Synthetic Lethality synthetic growth defect	FSW = 0.0340	Unknown	VPS35A (VPS35 HOMOLOG A)
AT2G17980	Predicted Synthetic Rescue interologs mapping Synthetic Rescue Synthetic Lethality	FSW = 0.0614	Unknown	ATSLY1 PROTEIN TRANSPORTER
AT2G27970	Predicted Phenotypic Enhancement	FSW = 0.0480	Unknown	CKS2 (CDK-SUBUNIT 2) CYCLIN-DEPENDENT PROTEIN KINASE/ CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT2G28390	Predicted Phenotypic Enhancement	FSW = 0.0629	Unknown	SAND FAMILY PROTEIN
AT2G36300	Predicted Synthetic Lethality two hybrid Synthetic Lethality	FSW = 0.0930	Unknown	INTEGRAL MEMBRANE YIP1 FAMILY PROTEIN
AT2G38130	Predicted Synthetic Lethality	FSW = 0.0753	Unknown	ATMAK3 N-ACETYLTRANSFERASE
AT2G40730	Predicted Synthetic Lethality	FSW = 0.0132	Unknown	HEAT REPEAT-CONTAINING PROTEIN
AT3G01090	Predicted Phenotypic Enhancement	FSW = 0.0393	Unknown	AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10) PROTEIN BINDING / PROTEIN KINASE
AT3G04710	Predicted Phenotypic Suppression	FSW = 0.0468	Unknown	ANKYRIN REPEAT FAMILY PROTEIN
AT3G07890	Predicted Affinity Capture-Western biochemical	FSW = 0.0484	Unknown	RABGAP/TBC DOMAIN-CONTAINING PROTEIN
AT3G11450	Predicted Affinity Capture-MS	FSW = 0.0076	Unknown	DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN / CELL DIVISION PROTEIN-RELATED
AT3G12180	Predicted Synthetic Lethality	FSW = 0.1016	Unknown	CORNICHON FAMILY PROTEIN
AT3G18430	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0269	Unknown	CALCIUM-BINDING EF HAND FAMILY PROTEIN
AT3G18860	Predicted Phenotypic Suppression	FSW = 0.2027	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G21060	Predicted Phenotypic Enhancement	FSW = 0.1276	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G47810	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.0857	Unknown	MAG1 (MAIGO 1) HYDROLASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT3G54380	Predicted Phenotypic Enhancement	FSW = 0.1867	Unknown	SAC3/GANP FAMILY PROTEIN
AT3G55170	Predicted Synthetic Lethality	FSW = 0.0206	Unknown	60S RIBOSOMAL PROTEIN L35 (RPL35C)
AT3G61710	Predicted Synthetic Lethality	FSW = 0.0249	Unknown	AUTOPHAGY PROTEIN APG6 FAMILY
AT4G14160	Predicted Synthetic Lethality	FSW = 0.0386	Unknown	TRANSPORT PROTEIN PUTATIVE
AT4G16700	Predicted Synthetic Lethality	FSW = 0.0190	Unknown	PSD1 (PHOSPHATIDYLSERINE DECARBOXYLASE 1) PHOSPHATIDYLSERINE DECARBOXYLASE
AT4G17890	Predicted Synthetic Lethality	FSW = 0.0574	Unknown	AGD8 (ARF-GAP DOMAIN 8) ARF GTPASE ACTIVATOR/ DNA BINDING / ZINC ION BINDING
AT4G22140	Predicted Phenotypic Enhancement	FSW = 0.1093	Unknown	DNA BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G26550	Predicted Synthetic Lethality	FSW = 0.0697	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SFT2-LIKE (INTERPROIPR011691) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G560201) HAS 452 BLAST HITS TO 452 PROTEINS IN 136 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 198 FUNGI - 89 PLANTS - 61 VIRUSES - 0 OTHER EUKARYOTES - 104 (SOURCE NCBI BLINK)
AT4G27690	Predicted Synthetic Lethality	FSW = 0.0460	Unknown	VPS26B (VACUOLAR PROTEIN SORTING 26B)
AT4G31770	Predicted Phenotypic Enhancement	FSW = 0.0034	Unknown	CALCINEURIN-LIKE PHOSPHOESTERASE FAMILY PROTEIN
AT4G33240	Predicted Phenotypic Suppression	FSW = 0.1200	Unknown	1-PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE/ ATP BINDING / PHOSPHATIDYLINOSITOL PHOSPHATE KINASE/ PROTEIN BINDING / ZINC ION BINDING
AT4G34450	Predicted Synthetic Lethality	FSW = 0.0337	Unknown	COATOMER GAMMA-2 SUBUNIT PUTATIVE / GAMMA-2 COAT PROTEIN PUTATIVE / GAMMA-2 COP PUTATIVE
AT4G39870	Predicted Synthetic Lethality	FSW = 0.0246	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TLDC (INTERPROIPR006571) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G055902) HAS 2018 BLAST HITS TO 1865 PROTEINS IN 220 SPECIES ARCHAE - 0 BACTERIA - 39 METAZOA - 1002 FUNGI - 279 PLANTS - 129 VIRUSES - 34 OTHER EUKARYOTES - 535 (SOURCE NCBI BLINK)
AT5G02310	Predicted Phenotypic Suppression	FSW = 0.0834	Unknown	PRT6 (PROTEOLYSIS 6) UBIQUITIN-PROTEIN LIGASE
AT5G06140	Predicted Synthetic Lethality	FSW = 0.0279	Unknown	SNX1 (SORTING NEXIN 1) PHOSPHOINOSITIDE BINDING / PROTEIN BINDING
AT5G09550	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS two hybrid	FSW = 0.0629	Unknown	RAB GDP-DISSOCIATION INHIBITOR
AT1G08780	Predicted Phenotypic Suppression	FSW = 0.1750	Unknown	AIP3 (ABI3-INTERACTING PROTEIN 3) UNFOLDED PROTEIN BINDING
AT1G59890	Predicted Phenotypic Suppression	FSW = 0.1585	Unknown	SNL5 (SIN3-LIKE 5)
AT1G67190	Predicted synthetic growth defect	FSW = 0.0988	Unknown	F-BOX FAMILY PROTEIN
AT2G17190	Predicted Phenotypic Enhancement	FSW = 0.0076	Unknown	UBIQUITIN FAMILY PROTEIN
AT2G34500	Predicted Phenotypic Enhancement	FSW = 0.0603	Unknown	CYP710A1 (CYTOCHROME P450 FAMILY 710 SUBFAMILY A POLYPEPTIDE 1) C-22 STEROL DESATURASE/ OXYGEN BINDING
AT3G12740	Predicted Synthetic Lethality	FSW = 0.0309	Unknown	ALIS1 (ALA-INTERACTING SUBUNIT 1) PHOSPHOLIPID TRANSPORTER
AT3G18520	Predicted Phenotypic Enhancement	FSW = 0.1147	Unknown	HDA15 HISTONE DEACETYLASE
AT3G20800	Predicted Phenotypic Enhancement	FSW = 0.0809	Unknown	RCD1-LIKE CELL DIFFERENTIATION PROTEIN PUTATIVE
AT3G22142	Predicted Phenotypic Suppression	FSW = 0.1274	Unknown	STRUCTURAL CONSTITUENT OF CELL WALL
AT3G22590	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.2324	Unknown	RNA POL II ACCESSORY FACTOR CDC73 FAMILY PROTEIN
AT3G42660	Predicted Phenotypic Enhancement	FSW = 0.1512	Unknown	NUCLEOTIDE BINDING
AT3G55380	Predicted Phenotypic Suppression	FSW = 0.0678	Unknown	UBC14 (UBIQUITIN-CONJUGATING ENZYME 14) UBIQUITIN-PROTEIN LIGASE
AT5G09230	Predicted Phenotypic Enhancement	FSW = 0.0587	Unknown	SRT2 (SIRTUIN 2) DNA BINDING / NAD OR NADH BINDING / NAD-DEPENDENT HISTONE DEACETYLASE/ ZINC ION BINDING
AT5G09740	Predicted synthetic growth defect	FSW = 0.1319	Unknown	HAM2 (HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2) H3/H4 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE/ NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G22840	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.0171	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT5G23290	Predicted Phenotypic Suppression	FSW = 0.1495	Unknown	PDF5 (PREFOLDIN 5) UNFOLDED PROTEIN BINDING
AT5G27970	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.1872	Unknown	BINDING
AT5G42000	Predicted Phenotypic Enhancement	FSW = 0.1541	Unknown	ORMDL FAMILY PROTEIN
AT5G43500	Predicted Phenotypic Enhancement	FSW = 0.1396	Unknown	ATARP9 (ACTIN-RELATED PROTEIN 9) DNA BINDING / PROTEIN BINDING
AT5G45600	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.2732	Unknown	GAS41 PROTEIN BINDING
AT5G52210	Predicted Synthetic Lethality Synthetic Lethality interologs mapping	FSW = 0.0610	Unknown	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1) GTP BINDING
AT5G53770	Predicted synthetic growth defect	FSW = 0.0650	Unknown	NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN
AT5G55310	Predicted Phenotypic Enhancement	FSW = 0.0883	Unknown	TOP1BETA (DNA TOPOISOMERASE 1 BETA) DNA TOPOISOMERASE TYPE I
AT5G59140	Predicted Phenotypic Suppression	FSW = 0.0363	Unknown	SKP1 FAMILY PROTEIN
AT5G61150	Predicted Phenotypic Enhancement	FSW = 0.1847	Unknown	VIP4 (VERNALIZATION INDEPENDENCE 4) PROTEIN BINDING
AT5G63140	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0358	Unknown	ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29) ACID PHOSPHATASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT5G13240	Predicted Phenotypic Suppression	FSW = 0.0249	Unknown	TRANSCRIPTION REGULATOR
AT5G13780	Predicted Phenotypic Suppression	FSW = 0.1255	Unknown	GCN5-RELATED N-ACETYLTRANSFERASE PUTATIVE
AT5G16850	Predicted Synthetic Lethality	FSW = 0.0243	Unknown	ATTERT (TELOMERASE REVERSE TRANSCRIPTASE) TELOMERASE/ TELOMERIC TEMPLATE RNA REVERSE TRANSCRIPTASE
AT5G21170	Predicted Phenotypic Enhancement	FSW = 0.0279	Unknown	5-AMP-ACTIVATED PROTEIN KINASE BETA-2 SUBUNIT PUTATIVE
AT5G41340	Predicted Phenotypic Enhancement	FSW = 0.0341	Unknown	UBC4 (UBIQUITIN CONJUGATING ENZYME 4) UBIQUITIN-PROTEIN LIGASE
AT5G41700	Predicted Phenotypic Suppression	FSW = 0.0581	Unknown	UBC8 (UBIQUITIN CONJUGATING ENZYME 8) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G45140	Predicted Synthetic Lethality	FSW = 0.0224	Unknown	NRPC2 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ RIBONUCLEOSIDE BINDING
AT5G46030	Predicted Phenotypic Suppression	FSW = 0.1070	Unknown	UNKNOWN PROTEIN
AT5G48120	Predicted Phenotypic Suppression	FSW = 0.1267	Unknown	BINDING
AT5G49510	Predicted Phenotypic Suppression	FSW = 0.1427	Unknown	PDF3 (PREFOLDIN 3) UNFOLDED PROTEIN BINDING
AT5G65180	Predicted Phenotypic Enhancement	FSW = 0.1339	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF618 (INTERPROIPR006903) REGULATION OF NUCLEAR PRE-MRNA PROTEIN (INTERPROIPR006569) ENTH/VHS (INTERPROIPR008942) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G100601) HAS 3523 BLAST HITS TO 3241 PROTEINS IN 333 SPECIES ARCHAE - 25 BACTERIA - 251 METAZOA - 1575 FUNGI - 421 PLANTS - 142 VIRUSES - 17 OTHER EUKARYOTES - 1092 (SOURCE NCBI BLINK)
AT5G66100	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1541	Unknown	LA DOMAIN-CONTAINING PROTEIN
AT5G67320	Predicted Phenotypic Enhancement	FSW = 0.1290	Unknown	HOS15 (HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 15)
AT4G17160	Predicted Phylogenetic profile method	FSW = 0.1359	Unknown	ATRABB1A (ARABIDOPSIS RAB GTPASE HOMOLOG B1A) GTP BINDING
AT5G47960	Predicted Phylogenetic profile method	FSW = 0.1126	Unknown	ATRABA4C GTP BINDING
AT3G15060	Predicted Phylogenetic profile method	FSW = 0.1126	Unknown	ATRABA1G (ARABIDOPSIS RAB GTPASE HOMOLOG A1G) GTP BINDING
AT2G33870	Predicted Phylogenetic profile method	FSW = 0.1126	Unknown	ARRABA1H (ARABIDOPSIS RAB GTPASE HOMOLOG A1H) GTP BINDING
AT5G60860	Predicted Phylogenetic profile method	FSW = 0.1126	Unknown	ATRABA1F (ARABIDOPSIS RAB GTPASE HOMOLOG A1F) GTP BINDING
AT4G39890	Predicted Phylogenetic profile method	FSW = 0.0947	Unknown	ATRABH1C (ARABIDOPSIS RAB GTPASE HOMOLOG H1C) GTP BINDING / PROTEIN BINDING

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Fasta sequences:

Proteins

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT5G10260 - ( AtRABH1e (Arabidopsis Rab GTPase homolog H1e) GTP binding )

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