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AT3G42660 - ( nucleotide binding )

138 Proteins interacs with AT3G42660

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT2G17360	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.0026	Unknown	40S RIBOSOMAL PROTEIN S4 (RPS4A)
AT2G30970	Predicted Synthetic Lethality	FSW = 0.0331	Unknown	ASP1 (ASPARTATE AMINOTRANSFERASE 1) L-ASPARTATE2-OXOGLUTARATE AMINOTRANSFERASE
AT3G60840	Predicted synthetic growth defect	FSW = 0.1348	Unknown	MAP65-4 (MICROTUBULE-ASSOCIATED PROTEIN 65-4)
AT3G22110	Predicted Phenotypic Enhancement	FSW = 0.1104	Unknown	PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT5G43530	Predicted synthetic growth defect Synthetic Lethality interaction prediction	FSW = 0.3225	Unknown	SNF2 DOMAIN-CONTAINING PROTEIN / HELICASE DOMAIN-CONTAINING PROTEIN / RING FINGER DOMAIN-CONTAINING PROTEIN
AT2G28190	Predicted Synthetic Lethality synthetic growth defect interaction prediction	FSW = 0.2933	Unknown	CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2) SUPEROXIDE DISMUTASE
AT3G11630	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.1640	Unknown	2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT1G12520	Predicted Synthetic Lethality synthetic growth defect interaction prediction	FSW = 0.3720	Unknown	ATCCS (COPPER CHAPERONE FOR SOD1) SUPEROXIDE DISMUTASE/ SUPEROXIDE DISMUTASE COPPER CHAPERONE
AT3G56570	Predicted Phenotypic Enhancement	FSW = 0.0257	Unknown	SET DOMAIN-CONTAINING PROTEIN
AT1G11890	Predicted Synthetic Lethality interaction prediction	FSW = 0.1676	Unknown	SEC22 TRANSPORTER
AT1G07670	Predicted synthetic growth defect	FSW = 0.0656	Unknown	CALCIUM-TRANSPORTING ATPASE
AT5G52640	Predicted Affinity Capture-MS	FSW = 0.0395	Unknown	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT4G17520	Predicted interaction prediction	FSW = 0.0156	Unknown	NUCLEAR RNA-BINDING PROTEIN PUTATIVE
AT4G16830	Predicted Synthetic Lethality	FSW = 0.0511	Unknown	NUCLEAR RNA-BINDING PROTEIN (RGGA)
AT4G26720	Predicted Phenotypic Enhancement	FSW = 0.1928	Unknown	PPX1 (PROTEIN PHOSPHATASE X 1) PROTEIN SERINE/THREONINE PHOSPHATASE
AT4G05190	Predicted Synthetic Lethality Co-expression	FSW = 0.2504	Unknown	ATK5 (ARABIDOPSIS THALIANA KINESIN 5) MICROTUBULE MOTOR
AT5G67270	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Co-expression	FSW = 0.4018	Unknown	ATEB1C (MICROTUBULE END BINDING PROTEIN 1) MICROTUBULE BINDING
AT2G24490	Predicted Phenotypic Enhancement	FSW = 0.1641	Unknown	RPA2 (REPLICON PROTEIN A2) PROTEIN BINDING
AT2G38810	Predicted interaction prediction Co-expression	FSW = 0.1112	Unknown	HTA8 (HISTONE H2A 8) DNA BINDING
AT3G12810	Predicted synthetic growth defect	FSW = 0.2862	Unknown	PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G43810	Predicted Phenotypic Suppression	FSW = 0.2392	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN F PUTATIVE / U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN PUTATIVE / SM PROTEIN F PUTATIVE
AT5G64630	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1032	Unknown	FAS2 (FASCIATA 2) NUCLEOTIDE BINDING / PROTEIN BINDING
AT1G19120	Predicted synthetic growth defect	FSW = 0.2669	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT2G03870	Predicted Synthetic Lethality Co-expression	FSW = 0.2279	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT4G10710	Predicted interologs mapping synthetic growth defect interaction prediction Co-expression	FSW = 0.1004	Unknown	SPT16 (GLOBAL TRANSCRIPTION FACTOR C)
AT4G10670	Predicted interologs mapping synthetic growth defect	FSW = 0.0835	Unknown	GTC2
AT1G03190	Predicted Phenotypic Enhancement	FSW = 0.0926	Unknown	UVH6 (ULTRAVIOLET HYPERSENSITIVE 6) ATP BINDING / ATP-DEPENDENT DNA HELICASE/ ATP-DEPENDENT HELICASE/ DNA BINDING / HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING
AT2G35670	Predicted Synthetic Lethality	FSW = 0.1971	Unknown	FIS2 (FERTILIZATION INDEPENDENT SEED 2) TRANSCRIPTION FACTOR
AT2G47620	Predicted Phenotypic Enhancement	FSW = 0.0650	Unknown	ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING
AT5G22750	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.2440	Unknown	RAD5 ATP BINDING / ATP-DEPENDENT HELICASE/ DNA BINDING / HELICASE/ HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING / PROTEIN BINDING / ZINC ION BINDING
AT2G26150	Predicted synthetic growth defect	FSW = 0.1328	Unknown	ATHSFA2 DNA BINDING / TRANSCRIPTION FACTOR
AT1G07370	Predicted Phenotypic Enhancement	FSW = 0.3515	Unknown	PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN) DNA BINDING / DNA POLYMERASE PROCESSIVITY FACTOR/ PROTEIN BINDING
AT1G65470	Predicted Synthetic Lethality synthetic growth defect interaction prediction Co-expression	FSW = 0.1951	Unknown	FAS1 (FASCIATA 1) HISTONE BINDING
AT2G13370	Predicted Synthetic Lethality synthetic growth defect interaction prediction	FSW = 0.1907	Unknown	CHR5 (CHROMATIN REMODELING 5) ATP BINDING / DNA BINDING / CHROMATIN BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G38560	Predicted Phenotypic Enhancement	FSW = 0.2086	Unknown	TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION ELONGATION FACTOR/ TRANSCRIPTION FACTOR
AT3G19210	Predicted Synthetic Lethality synthetic growth defect interaction prediction	FSW = 0.4139	Unknown	ATRAD54 (ARABIDOPSIS HOMOLOG OF RAD54) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G44950	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.3147	Unknown	HUB1 (HISTONE MONO-UBIQUITINATION 1) PROTEIN BINDING / PROTEIN HOMODIMERIZATION/ UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT1G35940	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.2827	Unknown	HUB1 (HISTONE MONO-UBIQUITINATION 1) PROTEIN BINDING / PROTEIN HOMODIMERIZATION/ UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT1G75510	Predicted Phenotypic Enhancement	FSW = 0.0993	Unknown	TRANSCRIPTION INITIATION FACTOR IIF BETA SUBUNIT (TFIIF-BETA) FAMILY PROTEIN
AT1G10130	Predicted synthetic growth defect	FSW = 0.0693	Unknown	ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3) CALCIUM-TRANSPORTING ATPASE/ CALMODULIN BINDING / MANGANESE-TRANSPORTING ATPASE/ PEROXIDASE
AT1G14690	Predicted synthetic growth defect	FSW = 0.1580	Unknown	MAP65-7 (MICROTUBULE-ASSOCIATED PROTEIN 65-7)
AT3G47690	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality	FSW = 0.3094	Unknown	ATEB1A MICROTUBULE BINDING
AT1G57550	Predicted Synthetic Lethality	FSW = 0.0415	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT2G31970	Predicted interaction prediction Synthetic Lethality synthetic growth defect Co-expression	FSW = 0.4151	Unknown	RAD50 ATP BINDING / NUCLEASE/ ZINC ION BINDING
AT5G57450	Predicted Synthetic Lethality synthetic growth defect interaction prediction	FSW = 0.4302	Unknown	XRCC3 ATP BINDING / DAMAGED DNA BINDING / PROTEIN BINDING / SINGLE-STRANDED DNA BINDING
AT5G66130	Predicted Synthetic Lethality	FSW = 0.2793	Unknown	ATRAD17 (ARABIDOPSIS THALIANA RADIATION SENSITIVE)
AT1G16190	Predicted Synthetic Lethality interaction prediction	FSW = 0.0460	Unknown	DNA REPAIR PROTEIN RAD23 PUTATIVE
AT3G25980	Predicted interaction prediction Synthetic Lethality Synthetic Lethality synthetic growth defect Phenotypic Enhancement Co-expression	FSW = 0.1719	Unknown	MITOTIC SPINDLE CHECKPOINT PROTEIN PUTATIVE (MAD2)
AT5G40820	Predicted synthetic growth defect Phenotypic Enhancement Synthetic Lethality Synthetic Lethality	FSW = 0.1711	Unknown	ATRAD3 BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / PROTEIN SERINE/THREONINE KINASE
AT3G28730	Predicted synthetic growth defect Phenotypic Enhancement Phenotypic Enhancement Synthetic Rescue Co-expression	FSW = 0.0719	Unknown	ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP) TRANSCRIPTION FACTOR
AT5G19910	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.2907	Unknown	SOH1 FAMILY PROTEIN
AT3G12530	Predicted Affinity Capture-MS Co-expression	FSW = 0.0098	Unknown	PSF2
AT2G37560	Predicted Synthetic Lethality Co-expression	FSW = 0.1157	Unknown	ORC2 (ORIGIN RECOGNITION COMPLEX SECOND LARGEST SUBUNIT 2) DNA REPLICATION ORIGIN BINDING / PROTEIN BINDING
AT5G54260	Predicted Synthetic Lethality synthetic growth defect interaction prediction	FSW = 0.4560	Unknown	MRE11 (MEIOTIC RECOMBINATION 11) ENDONUCLEASE/ EXONUCLEASE/ HYDROLASE/ MANGANESE ION BINDING / PROTEIN SERINE/THREONINE PHOSPHATASE
AT2G36200	Predicted interaction prediction Synthetic Lethality Synthetic Lethality synthetic growth defect	FSW = 0.2876	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT5G38470	Predicted Synthetic Lethality	FSW = 0.0612	Unknown	DNA REPAIR PROTEIN RAD23 PUTATIVE
AT5G20850	Predicted Synthetic Lethality synthetic growth defect Synthetic Lethality interaction prediction	FSW = 0.3232	Unknown	ATRAD51 ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ DAMAGED DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING / SEQUENCE-SPECIFIC DNA BINDING
AT1G08830	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.2038	Unknown	CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1) SUPEROXIDE DISMUTASE
AT1G04020	Predicted synthetic growth defect	FSW = 0.3358	Unknown	BARD1 (BREAST CANCER ASSOCIATED RING 1) DNA BINDING / TRANSCRIPTION COACTIVATOR
AT1G04730	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Co-expression	FSW = 0.6643	Unknown	AAA-TYPE ATPASE FAMILY PROTEIN
AT1G08780	Predicted interaction prediction Synthetic Lethality synthetic growth defect Phenotypic Enhancement Co-expression	FSW = 0.2976	Unknown	AIP3 (ABI3-INTERACTING PROTEIN 3) UNFOLDED PROTEIN BINDING
AT1G10930	Predicted Synthetic Lethality synthetic growth defect synthetic growth defect interaction prediction	FSW = 0.2877	Unknown	RECQ4A ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING
AT1G11930	Predicted Phenotypic Suppression	FSW = 0.0697	Unknown	ALANINE RACEMASE FAMILY PROTEIN
AT1G20610	Predicted Synthetic Lethality synthetic growth defect interaction prediction	FSW = 0.0717	Unknown	CYCB23 (CYCLIN B23) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G23260	Predicted Synthetic Lethality interaction prediction	FSW = 0.1603	Unknown	MMZ1 (MMS ZWEI HOMOLOGUE 1) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT1G29150	Predicted Phenotypic Enhancement	FSW = 0.1188	Unknown	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)
AT1G29990	Predicted Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.2645	Unknown	PDF6 (PREFOLDIN 6) UNFOLDED PROTEIN BINDING
AT1G49540	Predicted Phenotypic Suppression	FSW = 0.1655	Unknown	NUCLEOTIDE BINDING
AT1G51710	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement interaction prediction	FSW = 0.2292	Unknown	UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6) CALMODULIN BINDING / UBIQUITIN-SPECIFIC PROTEASE
AT1G52740	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.3037	Unknown	HTA9 (HISTONE H2A PROTEIN 9) DNA BINDING
AT1G54370	Predicted synthetic growth defect	FSW = 0.0895	Unknown	NHX5 SODIUM ION TRANSMEMBRANE TRANSPORTER/ SODIUMHYDROGEN ANTIPORTER
AT1G61040	Predicted Synthetic Lethality synthetic growth defect interaction prediction	FSW = 0.1966	Unknown	VIP5 (VERNALIZATION INDEPENDENCE 5) DNA BINDING
AT1G63160	Predicted Phenotypic Enhancement	FSW = 0.1252	Unknown	REPLICATION FACTOR C 40 KDA PUTATIVE
AT1G66740	Predicted synthetic growth defect Phenotypic Suppression Co-expression	FSW = 0.3903	Unknown	SGA2
AT1G80410	Predicted synthetic growth defect	FSW = 0.2583	Unknown	EMB2753 (EMBRYO DEFECTIVE 2753) BINDING
AT2G02760	Predicted Synthetic Lethality	FSW = 0.3108	Unknown	ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2) UBIQUITIN-PROTEIN LIGASE
AT2G18290	Predicted synthetic growth defect	FSW = 0.0597	Unknown	ANAPHASE-PROMOTING COMPLEX SUBUNIT 10 FAMILY / APC10 FAMILY
AT2G25100	Predicted synthetic growth defect Co-expression	FSW = 0.0663	Unknown	RIBONUCLEASE HII FAMILY PROTEIN
AT2G27970	Predicted Phenotypic Enhancement	FSW = 0.0984	Unknown	CKS2 (CDK-SUBUNIT 2) CYCLIN-DEPENDENT PROTEIN KINASE/ CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT2G33560	Predicted Synthetic Lethality interaction prediction	FSW = 0.0712	Unknown	SPINDLE CHECKPOINT PROTEIN-RELATED
AT2G44580	Predicted interaction prediction Synthetic Lethality Synthetic Lethality	FSW = 0.6383	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT3G02820	Predicted interaction prediction Synthetic Lethality synthetic growth defect Phenotypic Enhancement Co-expression	FSW = 0.4615	Unknown	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN
AT3G10070	Predicted Phenotypic Enhancement	FSW = 0.0932	Unknown	TAF12 (TBP-ASSOCIATED FACTOR 12) DNA BINDING / TRANSCRIPTION INITIATION FACTOR
AT3G12400	Predicted synthetic growth defect	FSW = 0.1969	Unknown	ELC UBIQUITIN BINDING
AT3G18860	Predicted Phenotypic Enhancement	FSW = 0.2753	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G20630	Predicted synthetic growth defect	FSW = 0.0663	Unknown	UBP14 (UBIQUITIN-SPECIFIC PROTEASE 14) UBIQUITIN-SPECIFIC PROTEASE
AT3G21060	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement interaction prediction	FSW = 0.1788	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G22480	Predicted interaction prediction Synthetic Lethality synthetic growth defect Co-expression	FSW = 0.2699	Unknown	PREFOLDIN-RELATED KE2 FAMILY PROTEIN
AT3G22590	Predicted Phenotypic Enhancement	FSW = 0.2258	Unknown	RNA POL II ACCESSORY FACTOR CDC73 FAMILY PROTEIN
AT3G26020	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement interaction prediction	FSW = 0.1814	Unknown	SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B PUTATIVE
AT1G07270	Predicted Synthetic Lethality synthetic growth defect Co-expression	FSW = 0.1345	Unknown	CELL DIVISION CONTROL PROTEIN CDC6B PUTATIVE (CDC6B)
AT1G08840	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality	FSW = 0.2420	Unknown	EMB2411 (EMBRYO DEFECTIVE 2411) ATP BINDING / ATP-DEPENDENT DNA HELICASE/ DNA BINDING
AT1G55915	Predicted Phenotypic Enhancement	FSW = 0.1835	Unknown	ZINC ION BINDING
AT1G67190	Predicted Affinity Capture-MS Synthetic Rescue	FSW = 0.3726	Unknown	F-BOX FAMILY PROTEIN
AT3G25100	Predicted Synthetic Lethality Co-expression	FSW = 0.2261	Unknown	CDC45 (CELL DIVISION CYCLE 45)
AT3G49650	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.0684	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT3G58560	Predicted synthetic growth defect	FSW = 0.3248	Unknown	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN
AT4G25120	Predicted interaction prediction Synthetic Lethality Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.3076	Unknown	ATP BINDING / ATP-DEPENDENT DNA HELICASE/ DNA BINDING / HYDROLASE
AT4G30870	Predicted synthetic growth defect	FSW = 0.2261	Unknown	MUS81 (MMS AND UV SENSITIVE 81) ENDONUCLEASE/ NUCLEIC ACID BINDING
AT4G38630	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement interaction prediction Co-expression	FSW = 0.2484	Unknown	RPN10 (REGULATORY PARTICLE NON-ATPASE 10) PEPTIDE RECEPTOR
AT5G09740	Predicted synthetic growth defect	FSW = 0.2609	Unknown	HAM2 (HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2) H3/H4 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE/ NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G10960	Predicted synthetic growth defect	FSW = 0.2365	Unknown	CCR4-NOT TRANSCRIPTION COMPLEX PROTEIN PUTATIVE
AT5G13780	Predicted Synthetic Lethality synthetic growth defect interaction prediction	FSW = 0.3066	Unknown	GCN5-RELATED N-ACETYLTRANSFERASE PUTATIVE
AT5G23290	Predicted interaction prediction Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.2792	Unknown	PDF5 (PREFOLDIN 5) UNFOLDED PROTEIN BINDING
AT5G26680	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality synthetic growth defect synthetic growth defect	FSW = 0.4771	Unknown	ENDONUCLEASE PUTATIVE
AT5G49010	Predicted Affinity Capture-MS	FSW = 0.0486	Unknown	SLD5 (SYNTHETIC LETHALITY WITH DPB11-1 5)
AT5G49510	Predicted interaction prediction Synthetic Lethality synthetic growth defect Co-expression	FSW = 0.2944	Unknown	PDF3 (PREFOLDIN 3) UNFOLDED PROTEIN BINDING
AT5G53770	Predicted synthetic growth defect	FSW = 0.1337	Unknown	NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN
AT5G67100	Predicted interaction prediction two hybrid synthetic growth defect Phenotypic Enhancement Affinity Capture-Western Affinity Capture-Western synthetic growth defect Synthetic Lethality Reconstituted Complex Co-expression	FSW = 0.0869	Unknown	ICU2 (INCURVATA2) DNA-DIRECTED DNA POLYMERASE
AT3G46960	Predicted Phenotypic Suppression	FSW = 0.0872	Unknown	ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING
AT4G11920	Predicted synthetic growth defect	FSW = 0.1999	Unknown	CCS52A2 SIGNAL TRANSDUCER
AT4G19003	Predicted synthetic growth defect	FSW = 0.1372	Unknown	VPS25
AT4G27040	Predicted synthetic growth defect	FSW = 0.1406	Unknown	VPS22
AT4G27180	Predicted Synthetic Lethality	FSW = 0.3023	Unknown	ATK2 (ARABIDOPSIS THALIANA KINESIN 2) MICROTUBULE BINDING / MICROTUBULE MOTOR
AT5G10260	Predicted Phenotypic Enhancement	FSW = 0.1512	Unknown	ATRABH1E (ARABIDOPSIS RAB GTPASE HOMOLOG H1E) GTP BINDING
AT5G10790	Predicted Phenotypic Enhancement	FSW = 0.1980	Unknown	UBP22 (UBIQUITIN-SPECIFIC PROTEASE 22) UBIQUITIN THIOLESTERASE/ UBIQUITIN-SPECIFIC PROTEASE/ ZINC ION BINDING
AT5G27740	Predicted Phenotypic Enhancement	FSW = 0.1793	Unknown	EMB2775 (EMBRYO DEFECTIVE 2775) DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT5G27970	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2565	Unknown	BINDING
AT5G41700	Predicted Phenotypic Enhancement	FSW = 0.1499	Unknown	UBC8 (UBIQUITIN CONJUGATING ENZYME 8) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G43500	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2734	Unknown	ATARP9 (ACTIN-RELATED PROTEIN 9) DNA BINDING / PROTEIN BINDING
AT5G45600	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.3190	Unknown	GAS41 PROTEIN BINDING
AT5G48640	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1724	Unknown	CYCLIN FAMILY PROTEIN
AT5G55310	Predicted Phenotypic Suppression	FSW = 0.1657	Unknown	TOP1BETA (DNA TOPOISOMERASE 1 BETA) DNA TOPOISOMERASE TYPE I
AT5G63610	Predicted Phenotypic Suppression	FSW = 0.0887	Unknown	CDKE1 (CYCLIN-DEPENDENT KINASE E1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G63920	Predicted Synthetic Lethality synthetic growth defect interaction prediction Co-expression	FSW = 0.2660	Unknown	DNA TOPOISOMERASE III ALPHA PUTATIVE
AT4G16970	Predicted Synthetic Lethality Colocalization	FSW = 0.0835	Unknown	ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G55255	Predicted synthetic growth defect	FSW = 0.1726	Unknown	ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G16330	Predicted synthetic growth defect Synthetic Lethality Co-expression	FSW = 0.0663	Unknown	CYCB31 (CYCLIN B31) CYCLIN-DEPENDENT PROTEIN KINASE
AT2G23420	Predicted synthetic growth defect	FSW = 0.1745	Unknown	NAPRT2 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2) NICOTINATE PHOSPHORIBOSYLTRANSFERASE
AT1G15920	Predicted synthetic growth defect	FSW = 0.2549	Unknown	CCR4-NOT TRANSCRIPTION COMPLEX PROTEIN PUTATIVE
AT1G13460	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.0248	Unknown	SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B PUTATIVE
AT3G07120	Predicted synthetic growth defect Synthetic Lethality interaction prediction	FSW = 0.2420	Unknown	ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN
AT5G48630	Predicted synthetic growth defect	FSW = 0.0488	Unknown	CYCLIN FAMILY PROTEIN
AT5G04920	Predicted synthetic growth defect	FSW = 0.1739	Unknown	VACUOLAR PROTEIN SORTING 36 FAMILY PROTEIN / VPS36 FAMILY PROTEIN
AT2G18000	Predicted synthetic growth defect	FSW = 0.2512	Unknown	TAF14 (TBP-ASSOCIATED FACTOR 14)
AT5G16270	Predicted Synthetic Lethality Co-expression	FSW = 0.0930	Unknown	SYN4 (SISTER CHROMATID COHESION 1 PROTEIN 4)
AT1G14400	Predicted Synthetic Lethality	FSW = 0.2635	Unknown	UBC1 (UBIQUITIN CARRIER PROTEIN 1) UBIQUITIN-PROTEIN LIGASE
AT2G38905	Predicted interaction prediction	FSW = 0.0670	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT3G42660 - ( nucleotide binding )

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