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AT3G58560 - ( endonuclease/exonuclease/phosphatase family protein )

136 Proteins interacs with AT3G58560

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT4G14880	Predicted Affinity Capture-MS	FSW = 0.0142	Unknown	OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1) CYSTEINE SYNTHASE
AT1G78900	Predicted synthetic growth defect	FSW = 0.0249	Unknown	VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A) ATP BINDING / HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT2G07698	Predicted synthetic growth defect	FSW = 0.0336	Unknown	ATP SYNTHASE ALPHA CHAIN MITOCHONDRIAL PUTATIVE
AT1G64790	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0226	Unknown	BINDING
AT2G01690	Predicted synthetic growth defect	FSW = 0.0200	Unknown	BINDING
AT5G13450	Predicted synthetic growth defect	FSW = 0.0155	Unknown	ATP SYNTHASE DELTA CHAIN MITOCHONDRIAL PUTATIVE / H(+)-TRANSPORTING TWO-SECTOR ATPASE DELTA (OSCP) SUBUNIT PUTATIVE
AT2G06530	Predicted synthetic growth defect	FSW = 0.0825	Unknown	VPS21
AT5G19830	Predicted synthetic growth defect	FSW = 0.0063	Unknown	AMINOACYL-TRNA HYDROLASE
AT5G22330	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0436	Unknown	RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1) PROTEIN BINDING
AT3G02660	Predicted Synthetic Lethality	FSW = 0.0252	Unknown	EMB2768 (EMBRYO DEFECTIVE 2768) ATP BINDING / RNA BINDING / AMINOACYL-TRNA LIGASE/ NUCLEOTIDE BINDING / TYROSINE-TRNA LIGASE
AT2G43750	Predicted Affinity Capture-MS	FSW = 0.0315	Unknown	OASB (O-ACETYLSERINE (THIOL) LYASE B) CYSTEINE SYNTHASE
AT3G59760	Predicted interaction prediction	FSW = 0.0157	Unknown	OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C) ATP BINDING / CYSTEINE SYNTHASE
AT5G44780	Predicted interaction prediction	FSW = 0.0077	Unknown	UNKNOWN PROTEIN
AT1G18440	Predicted synthetic growth defect	FSW = 0.0143	Unknown	PEPTIDYL-TRNA HYDROLASE FAMILY PROTEIN
AT5G63110	Predicted synthetic growth defect	FSW = 0.1247	Unknown	HDA6 (HISTONE DEACETYLASE 6) HISTONE DEACETYLASE
AT4G35800	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1034	Unknown	NRPB1 (RNA POLYMERASE II LARGE SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT1G73230	Predicted two hybrid	FSW = 0.0317	Unknown	NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX (NAC) DOMAIN-CONTAINING PROTEIN
AT5G09260	Predicted synthetic growth defect	FSW = 0.1692	Unknown	VPS202 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 202)
AT3G51460	Predicted Synthetic Lethality	FSW = 0.0554	Unknown	RHD4 (ROOT HAIR DEFECTIVE4) PHOSPHATIDYLINOSITOL-45-BISPHOSPHATE 5-PHOSPHATASE/ PHOSPHATIDYLINOSITOL-4-PHOSPHATE PHOSPHATASE
AT5G52640	Predicted synthetic growth defect	FSW = 0.0400	Unknown	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT1G62740	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0185	Unknown	STRESS-INDUCIBLE PROTEIN PUTATIVE
AT5G63880	Predicted synthetic growth defect	FSW = 0.1105	Unknown	VPS201
AT4G17520	Predicted interaction prediction	FSW = 0.0158	Unknown	NUCLEAR RNA-BINDING PROTEIN PUTATIVE
AT2G30260	Predicted Synthetic Lethality	FSW = 0.0530	Unknown	U2B (U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B) RNA BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT4G16830	Predicted interologs mapping	FSW = 0.0324	Unknown	NUCLEAR RNA-BINDING PROTEIN (RGGA)
AT4G05190	Predicted Synthetic Lethality	FSW = 0.0564	Unknown	ATK5 (ARABIDOPSIS THALIANA KINESIN 5) MICROTUBULE MOTOR
AT5G67270	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.1437	Unknown	ATEB1C (MICROTUBULE END BINDING PROTEIN 1) MICROTUBULE BINDING
AT3G54610	Predicted Synthetic Lethality	FSW = 0.1041	Unknown	GCN5 DNA BINDING / H3 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE
AT5G59710	Predicted interaction prediction	FSW = 0.1333	Unknown	VIP2 (VIRE2 INTERACTING PROTEIN2) PROTEIN BINDING / TRANSCRIPTION REGULATOR
AT3G12810	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.1605	Unknown	PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT3G13445	Predicted interologs mapping Synthetic Rescue Synthetic Lethality	FSW = 0.0314	Unknown	TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT3G44530	Predicted synthetic growth defect	FSW = 0.1624	Unknown	HIRA (ARABIDOPSIS HOMOLOG OF HISTONE CHAPERONE HIRA) NUCLEOTIDE BINDING / PROTEIN BINDING
AT2G43810	Predicted Synthetic Lethality	FSW = 0.1490	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN F PUTATIVE / U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN PUTATIVE / SM PROTEIN F PUTATIVE
AT1G02680	Predicted two hybrid	FSW = 0.0597	Unknown	TAF13 (TBP-ASSOCIATED FACTOR 13) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G19120	Predicted Synthetic Lethality	FSW = 0.1873	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT2G03870	Predicted Synthetic Lethality	FSW = 0.1529	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT4G10710	Predicted Synthetic Lethality	FSW = 0.0761	Unknown	SPT16 (GLOBAL TRANSCRIPTION FACTOR C)
AT5G09860	Predicted Affinity Capture-Western Synthetic Lethality Co-expression	FSW = 0.0567	Unknown	NUCLEAR MATRIX PROTEIN-RELATED
AT4G10670	Predicted Synthetic Lethality	FSW = 0.0943	Unknown	GTC2
AT1G63210	Predicted Synthetic Rescue Synthetic Rescue Synthetic Rescue	FSW = 0.0589	Unknown	RNA BINDING / HYDROLASE ACTING ON ESTER BONDS / PROTEIN BINDING / TRANSCRIPTION ELONGATION REGULATOR
AT1G06960	Predicted Synthetic Lethality	FSW = 0.0289	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN U2B PUTATIVE / SPLICEOSOMAL PROTEIN PUTATIVE
AT4G38130	Predicted synthetic growth defect	FSW = 0.0631	Unknown	HD1 (HISTONE DEACETYLASE 1) BASAL TRANSCRIPTION REPRESSOR/ HISTONE DEACETYLASE/ PROTEIN BINDING
AT2G36740	Predicted Synthetic Lethality	FSW = 0.1389	Unknown	SWC2 DNA BINDING / TRANSCRIPTION FACTOR
AT2G38560	Predicted Synthetic Lethality	FSW = 0.2477	Unknown	TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION ELONGATION FACTOR/ TRANSCRIPTION FACTOR
AT3G19210	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.2341	Unknown	ATRAD54 (ARABIDOPSIS HOMOLOG OF RAD54) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT1G65440	Predicted Synthetic Rescue Synthetic Rescue Synthetic Rescue interaction prediction	FSW = 0.0333	Unknown	GTB1 RNA BINDING / HYDROLASE ACTING ON ESTER BONDS / TRANSCRIPTION ELONGATION REGULATOR
AT4G08350	Predicted interologs mapping	FSW = 0.0490	Unknown	GTA2 (GLOBAL TRANSCRIPTION FACTOR GROUP A2) STRUCTURAL CONSTITUENT OF RIBOSOME / TRANSCRIPTION ELONGATION REGULATOR/ TRANSCRIPTION FACTOR
AT1G55520	Predicted Synthetic Lethality Synthetic Rescue	FSW = 0.0658	Unknown	TBP2 (TATA BINDING PROTEIN 2) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ TATA-BINDING PROTEIN BINDING
AT2G34210	Predicted Synthetic Rescue	FSW = 0.0421	Unknown	STRUCTURAL CONSTITUENT OF RIBOSOME / TRANSCRIPTION ELONGATION REGULATOR/ TRANSCRIPTION INITIATION FACTOR
AT2G44950	Predicted synthetic growth defect	FSW = 0.2134	Unknown	HUB1 (HISTONE MONO-UBIQUITINATION 1) PROTEIN BINDING / PROTEIN HOMODIMERIZATION/ UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT3G05780	Predicted synthetic growth defect	FSW = 0.0559	Unknown	LON3 (LON PROTEASE 3) ATP BINDING / ATP-DEPENDENT PEPTIDASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / SERINE-TYPE ENDOPEPTIDASE/ SERINE-TYPE PEPTIDASE
AT1G35940	Predicted synthetic growth defect	FSW = 0.1298	Unknown	LON3 (LON PROTEASE 3) ATP BINDING / ATP-DEPENDENT PEPTIDASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / SERINE-TYPE ENDOPEPTIDASE/ SERINE-TYPE PEPTIDASE
AT5G26860	Predicted synthetic growth defect	FSW = 0.0267	Unknown	LON1 (LON PROTEASE 1) ATP BINDING / ATP-DEPENDENT PEPTIDASE/ SERINE-TYPE PEPTIDASE
AT1G50500	Predicted Synthetic Lethality	FSW = 0.0480	Unknown	HIT1 (HEAT-INTOLERANT 1) TRANSPORTER
AT1G75510	Predicted Affinity Capture-Western	FSW = 0.1188	Unknown	TRANSCRIPTION INITIATION FACTOR IIF BETA SUBUNIT (TFIIF-BETA) FAMILY PROTEIN
AT1G71270	Predicted Synthetic Lethality	FSW = 0.0389	Unknown	POK (POKY POLLEN TUBE)
AT5G66020	Predicted Synthetic Lethality	FSW = 0.0597	Unknown	ATSAC1B (SUPPRESSOR OF ACTIN 1B) PHOSPHATIDYLINOSITOL-45-BISPHOSPHATE 5-PHOSPHATASE
AT3G02530	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0027	Unknown	CHAPERONIN PUTATIVE
AT5G44110	Predicted two hybrid interaction prediction	FSW = 0.0156	Unknown	POP1 TRANSPORTER
AT1G03905	Predicted two hybrid	FSW = 0.0429	Unknown	ABC TRANSPORTER FAMILY PROTEIN
AT3G47690	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.1325	Unknown	ATEB1A MICROTUBULE BINDING
AT2G31970	Predicted Synthetic Lethality	FSW = 0.1976	Unknown	RAD50 ATP BINDING / NUCLEASE/ ZINC ION BINDING
AT5G40820	Predicted Phenotypic Enhancement	FSW = 0.1177	Unknown	ATRAD3 BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / PROTEIN SERINE/THREONINE KINASE
AT4G16420	Predicted synthetic growth defect	FSW = 0.0176	Unknown	ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR
AT5G19910	Predicted Synthetic Lethality	FSW = 0.1616	Unknown	SOH1 FAMILY PROTEIN
AT4G21710	Predicted Synthetic Lethality	FSW = 0.0690	Unknown	NRPB2 DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT5G54260	Predicted Synthetic Lethality	FSW = 0.2634	Unknown	MRE11 (MEIOTIC RECOMBINATION 11) ENDONUCLEASE/ EXONUCLEASE/ HYDROLASE/ MANGANESE ION BINDING / PROTEIN SERINE/THREONINE PHOSPHATASE
AT1G77140	Predicted synthetic growth defect	FSW = 0.0654	Unknown	VPS45 (VACUOLAR PROTEIN SORTING 45) PROTEIN TRANSPORTER
AT2G21790	Predicted Synthetic Lethality	FSW = 0.0280	Unknown	RNR1 (RIBONUCLEOTIDE REDUCTASE 1) ATP BINDING / PROTEIN BINDING / RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE
AT3G54860	Predicted Synthetic Lethality	FSW = 0.1154	Unknown	VACUOLAR PROTEIN SORTING PROTEIN PUTATIVE
AT5G20850	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.1465	Unknown	ATRAD51 ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ DAMAGED DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING / SEQUENCE-SPECIFIC DNA BINDING
AT1G02080	Predicted two hybrid Synthetic Rescue Synthetic Lethality Synthetic Lethality Synthetic Lethality Co-purification Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Co-purification Affinity Capture-MS interaction prediction	FSW = 0.1837	Unknown	TRANSCRIPTIONAL REGULATOR-RELATED
AT1G04020	Predicted synthetic growth defect	FSW = 0.1595	Unknown	BARD1 (BREAST CANCER ASSOCIATED RING 1) DNA BINDING / TRANSCRIPTION COACTIVATOR
AT1G04730	Predicted synthetic growth defect	FSW = 0.2648	Unknown	AAA-TYPE ATPASE FAMILY PROTEIN
AT1G07705	Predicted Synthetic Lethality Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Co-expression	FSW = 0.1998	Unknown	TRANSCRIPTION REGULATOR
AT1G10930	Predicted synthetic growth defect	FSW = 0.1479	Unknown	RECQ4A ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING
AT1G15780	Predicted Synthetic Lethality	FSW = 0.0904	Unknown	UNKNOWN PROTEIN
AT1G54370	Predicted synthetic growth defect	FSW = 0.0504	Unknown	NHX5 SODIUM ION TRANSMEMBRANE TRANSPORTER/ SODIUMHYDROGEN ANTIPORTER
AT1G59890	Predicted synthetic growth defect	FSW = 0.1442	Unknown	SNL5 (SIN3-LIKE 5)
AT1G66740	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.2521	Unknown	SGA2
AT1G80410	Predicted Synthetic Lethality	FSW = 0.2234	Unknown	EMB2753 (EMBRYO DEFECTIVE 2753) BINDING
AT2G02760	Predicted Synthetic Lethality	FSW = 0.1819	Unknown	ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2) UBIQUITIN-PROTEIN LIGASE
AT2G27600	Predicted synthetic growth defect	FSW = 0.0427	Unknown	SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1) ATP BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT2G37550	Predicted synthetic growth defect	FSW = 0.0162	Unknown	AGD7 ARF GTPASE ACTIVATOR/ DNA BINDING / ZINC ION BINDING
AT2G44580	Predicted synthetic growth defect	FSW = 0.2260	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT3G03420	Predicted synthetic growth defect	FSW = 0.0542	Unknown	KU70-BINDING FAMILY PROTEIN
AT3G12400	Predicted synthetic growth defect	FSW = 0.1714	Unknown	ELC UBIQUITIN BINDING
AT3G14010	Predicted Synthetic Rescue	FSW = 0.0391	Unknown	CID4 (CTC-INTERACTING DOMAIN 4) PROTEIN BINDING
AT3G20800	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western interaction prediction	FSW = 0.0835	Unknown	RCD1-LIKE CELL DIFFERENTIATION PROTEIN PUTATIVE
AT3G42660	Predicted synthetic growth defect	FSW = 0.3248	Unknown	NUCLEOTIDE BINDING
AT3G45630	Predicted Synthetic Lethality Synthetic Lethality Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.1503	Unknown	RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT1G07270	Predicted Synthetic Lethality	FSW = 0.0530	Unknown	CELL DIVISION CONTROL PROTEIN CDC6B PUTATIVE (CDC6B)
AT1G22240	Predicted Affinity Capture-Western	FSW = 0.0049	Unknown	APUM8 (ARABIDOPSIS PUMILIO 8) RNA BINDING / BINDING
AT1G49760	Predicted Synthetic Lethality biochemical	FSW = 0.0226	Unknown	PAB8 (POLY(A) BINDING PROTEIN 8) RNA BINDING / TRANSLATION INITIATION FACTOR
AT1G79730	Predicted Synthetic Lethality Synthetic Lethality Affinity Capture-Western	FSW = 0.1084	Unknown	ELF7 (EARLY FLOWERING 7)
AT2G31260	Predicted Affinity Capture-MS	FSW = 0.0029	Unknown	APG9 (AUTOPHAGY 9)
AT2G39840	Predicted Affinity Capture-MS	FSW = 0.0070	Unknown	TOPP4 PROTEIN SERINE/THREONINE PHOSPHATASE
AT3G22590	Predicted Synthetic Lethality Synthetic Lethality Affinity Capture-Western	FSW = 0.2205	Unknown	RNA POL II ACCESSORY FACTOR CDC73 FAMILY PROTEIN
AT4G00660	Predicted interologs mapping interologs mapping interaction prediction	FSW = 0.0715	Unknown	DEAD/DEAH BOX HELICASE PUTATIVE
AT4G25120	Predicted synthetic growth defect	FSW = 0.1919	Unknown	ATP BINDING / ATP-DEPENDENT DNA HELICASE/ DNA BINDING / HYDROLASE
AT5G09740	Predicted synthetic growth defect	FSW = 0.1584	Unknown	HAM2 (HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2) H3/H4 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE/ NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G10960	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Co-purification two hybrid Affinity Capture-Western two hybrid two hybrid two hybrid Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interologs mapping Affinity Capture-Western Affinity Capture-Western two hybrid Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western two hybrid interologs mapping Co-purification co-fractionation Co-fractionation	FSW = 0.5669	Unknown	CCR4-NOT TRANSCRIPTION COMPLEX PROTEIN PUTATIVE
AT5G13780	Predicted Synthetic Lethality	FSW = 0.2728	Unknown	GCN5-RELATED N-ACETYLTRANSFERASE PUTATIVE
AT5G18230	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS interaction prediction	FSW = 0.1683	Unknown	TRANSCRIPTION REGULATOR NOT2/NOT3/NOT5 FAMILY PROTEIN
AT5G26680	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2192	Unknown	ENDONUCLEASE PUTATIVE
AT5G63610	Predicted Affinity Capture-Western interaction prediction	FSW = 0.0980	Unknown	CDKE1 (CYCLIN-DEPENDENT KINASE E1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT3G61710	Predicted synthetic growth defect	FSW = 0.0371	Unknown	AUTOPHAGY PROTEIN APG6 FAMILY
AT4G22350	Predicted Phenotypic Enhancement	FSW = 0.0074	Unknown	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN
AT4G27040	Predicted Synthetic Lethality	FSW = 0.1564	Unknown	VPS22
AT4G27180	Predicted Synthetic Lethality	FSW = 0.0858	Unknown	ATK2 (ARABIDOPSIS THALIANA KINESIN 2) MICROTUBULE BINDING / MICROTUBULE MOTOR
AT4G30870	Predicted synthetic growth defect	FSW = 0.1029	Unknown	MUS81 (MMS AND UV SENSITIVE 81) ENDONUCLEASE/ NUCLEIC ACID BINDING
AT5G10270	Predicted Synthetic Lethality	FSW = 0.2034	Unknown	CDKC1 (CYCLIN-DEPENDENT KINASE C1) KINASE
AT5G22950	Predicted synthetic growth defect	FSW = 0.0765	Unknown	VPS241
AT5G27970	Predicted Synthetic Lethality	FSW = 0.1298	Unknown	BINDING
AT5G41880	Predicted Phenotypic Enhancement	FSW = 0.0889	Unknown	POLA3 DNA PRIMASE
AT5G43500	Predicted synthetic growth defect	FSW = 0.1353	Unknown	ATARP9 (ACTIN-RELATED PROTEIN 9) DNA BINDING / PROTEIN BINDING
AT5G45600	Predicted synthetic growth defect	FSW = 0.1753	Unknown	GAS41 PROTEIN BINDING
AT5G66100	Predicted synthetic growth defect	FSW = 0.0477	Unknown	LA DOMAIN-CONTAINING PROTEIN
AT1G15920	Predicted two hybrid two hybrid two hybrid two hybrid two hybrid interologs mapping Co-purification Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western co-fractionation Co-fractionation Co-purification interologs mapping two hybrid	FSW = 0.6124	Unknown	CCR4-NOT TRANSCRIPTION COMPLEX PROTEIN PUTATIVE
AT1G12270	Predicted Affinity Capture-MS	FSW = 0.0196	Unknown	STRESS-INDUCIBLE PROTEIN PUTATIVE
AT4G20020	Predicted Affinity Capture-MS	FSW = 0.0055	Unknown	UNKNOWN PROTEIN
AT2G45810	Predicted interologs mapping interologs mapping	FSW = 0.0698	Unknown	DEAD/DEAH BOX HELICASE PUTATIVE
AT2G32070	Predicted interologs mapping interaction prediction	FSW = 0.1022	Unknown	CCR4-NOT TRANSCRIPTION COMPLEX PROTEIN PUTATIVE
AT2G34050	Predicted synthetic growth defect	FSW = 0.0629	Unknown	INVOLVED IN PROTEIN COMPLEX ASSEMBLY LOCATED IN MITOCHONDRION CHLOROPLAST EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S ATP11 (INTERPROIPR010591) HAS 224 BLAST HITS TO 224 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 87 FUNGI - 80 PLANTS - 18 VIRUSES - 0 OTHER EUKARYOTES - 39 (SOURCE NCBI BLINK)
AT1G55255	Predicted synthetic growth defect	FSW = 0.1747	Unknown	INVOLVED IN PROTEIN COMPLEX ASSEMBLY LOCATED IN MITOCHONDRION CHLOROPLAST EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S ATP11 (INTERPROIPR010591) HAS 224 BLAST HITS TO 224 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 87 FUNGI - 80 PLANTS - 18 VIRUSES - 0 OTHER EUKARYOTES - 39 (SOURCE NCBI BLINK)
AT2G23420	Predicted synthetic growth defect	FSW = 0.1541	Unknown	NAPRT2 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2) NICOTINATE PHOSPHORIBOSYLTRANSFERASE
AT1G10450	Predicted synthetic growth defect	FSW = 0.1263	Unknown	SNL6 (SIN3-LIKE 6)
AT3G07120	Predicted synthetic growth defect	FSW = 0.1757	Unknown	ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN
AT4G35890	Predicted synthetic growth defect	FSW = 0.0197	Unknown	LA DOMAIN-CONTAINING PROTEIN
AT3G45000	Predicted synthetic growth defect	FSW = 0.0716	Unknown	VPS242
AT2G18000	Predicted synthetic growth defect	FSW = 0.1613	Unknown	TAF14 (TBP-ASSOCIATED FACTOR 14)
AT3G07740	Predicted synthetic growth defect	FSW = 0.0384	Unknown	ADA2A (HOMOLOG OF YEAST ADA2 2A) DNA BINDING / TRANSCRIPTION FACTOR
AT1G14400	Predicted Synthetic Lethality	FSW = 0.1712	Unknown	UBC1 (UBIQUITIN CARRIER PROTEIN 1) UBIQUITIN-PROTEIN LIGASE
AT5G04920	Predicted Synthetic Lethality	FSW = 0.1442	Unknown	VACUOLAR PROTEIN SORTING 36 FAMILY PROTEIN / VPS36 FAMILY PROTEIN
AT1G80780	Predicted two hybrid	FSW = 0.0883	Unknown	CCR4-NOT TRANSCRIPTION COMPLEX PROTEIN PUTATIVE
AT5G48630	Predicted interaction prediction	FSW = 0.0584	Unknown	CYCLIN FAMILY PROTEIN

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

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AT3G58560 - ( endonuclease/exonuclease/phosphatase family protein )

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