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AT4G16420 - ( ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA binding / transcription coactivator/ transcription factor )

144 Proteins interacs with AT4G16420

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT3G54610	Experimental enzymatic study Reconstituted Complex affinity technology	FSW = 0.1216	Class D: nucleus (p = 0.78)	GCN5 DNA BINDING / H3 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE
AT4G25490	Experimental Reconstituted Complex two hybrid	FSW = 0.0243	Class D: nucleus (p = 0.78)	CBF1 (C-REPEAT/DRE BINDING FACTOR 1) DNA BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR
AT5G67500	Predicted Synthetic Lethality	FSW = 0.0080	Unknown	VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2) VOLTAGE-GATED ANION CHANNEL
AT3G09630	Predicted Phenotypic Enhancement	FSW = 0.0332	Unknown	60S RIBOSOMAL PROTEIN L4/L1 (RPL4A)
AT1G07660	Predicted Affinity Capture-MS	FSW = 0.0529	Unknown	HISTONE H4
AT4G16660	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.2050	Unknown	HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE
AT1G20260	Predicted Phenotypic Enhancement	FSW = 0.0811	Unknown	HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT5G12010	Predicted Synthetic Lethality	FSW = 0.0215	Unknown	UNKNOWN PROTEIN
AT5G49830	Predicted two hybrid	FSW = 0.0151	Unknown	LOCATED IN PLASMA MEMBRANE EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S VPS51/VPS67 (INTERPROIPR014812) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G103851) HAS 257 BLAST HITS TO 210 PROTEINS IN 83 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 133 FUNGI - 61 PLANTS - 56 VIRUSES - 2 OTHER EUKARYOTES - 5 (SOURCE NCBI BLINK)
AT4G12650	Predicted Phenotypic Enhancement	FSW = 0.0890	Unknown	LOCATED IN INTEGRAL TO MEMBRANE GOLGI APPARATUS PLASMA MEMBRANE VACUOLE EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NONASPANIN (TM9SF) (INTERPROIPR004240) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G351601) HAS 983 BLAST HITS TO 980 PROTEINS IN 161 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 434 FUNGI - 144 PLANTS - 228 VIRUSES - 0 OTHER EUKARYOTES - 177 (SOURCE NCBI BLINK)
AT2G30710	Predicted Synthetic Lethality	FSW = 0.0060	Unknown	RABGAP/TBC DOMAIN-CONTAINING PROTEIN
AT5G10350	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Reconstituted Complex Affinity Capture-Western Protein-peptide	FSW = 0.1439	Unknown	POLYADENYLATE-BINDING PROTEIN FAMILY PROTEIN / PABP FAMILY PROTEIN
AT4G04910	Predicted two hybrid	FSW = 0.0015	Unknown	NSF (N-ETHYLMALEIMIDE SENSITIVE FACTOR) ATP BINDING / BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT3G48170	Predicted Phenotypic Enhancement	FSW = 0.0263	Unknown	ALDH10A9 3-CHLOROALLYL ALDEHYDE DEHYDROGENASE/ OXIDOREDUCTASE
AT1G74710	Predicted synthetic growth defect	FSW = 0.0852	Unknown	ISOCHORISMATE SYNTHASE 1 (ICS1) / ISOCHORISMATE MUTASE
AT1G56050	Predicted Synthetic Lethality synthetic growth defect Synthetic Lethality Phenotypic Enhancement	FSW = 0.2097	Unknown	GTP-BINDING PROTEIN-RELATED
AT2G45300	Predicted Synthetic Lethality	FSW = 0.0892	Unknown	3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE / EPSP SYNTHASE
AT5G51820	Predicted Synthetic Lethality Phenotypic Enhancement Synthetic Lethality	FSW = 0.1340	Unknown	PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE
AT1G48860	Predicted Phenotypic Enhancement	FSW = 0.1024	Unknown	3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE PUTATIVE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PUTATIVE / EPSP SYNTHASE PUTATIVE
AT5G60540	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.2186	Unknown	PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT4G36490	Predicted Synthetic Rescue	FSW = 0.0586	Unknown	SFH12 (SEC14-LIKE 12) PHOSPHATIDYLINOSITOL TRANSPORTER/ TRANSPORTER
AT3G50360	Predicted Affinity Capture-MS	FSW = 0.0072	Unknown	ATCEN2 (CENTRIN2) CALCIUM ION BINDING
AT1G26630	Predicted Affinity Capture-MS	FSW = 0.0052	Unknown	FBR12 (FUMONISIN B1-RESISTANT12) TRANSLATION INITIATION FACTOR
AT2G38290	Predicted Synthetic Lethality	FSW = 0.0064	Unknown	ATAMT2 (AMMONIUM TRANSPORTER 2) AMMONIUM TRANSMEMBRANE TRANSPORTER/ HIGH AFFINITY SECONDARY ACTIVE AMMONIUM TRANSMEMBRANE TRANSPORTER
AT2G32670	Predicted Synthetic Lethality synthetic growth defect Synthetic Lethality	FSW = 0.2085	Unknown	ATVAMP725
AT1G32090	Predicted Phenotypic Enhancement	FSW = 0.0564	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT5G60620	Predicted two hybrid	FSW = 0.0071	Unknown	PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN
AT4G25740	Predicted Affinity Capture-MS	FSW = 0.1339	Unknown	40S RIBOSOMAL PROTEIN S10 (RPS10A)
AT1G80050	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1549	Unknown	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) ADENINE PHOSPHORIBOSYLTRANSFERASE/ PHOSPHATE TRANSMEMBRANE TRANSPORTER
AT2G37790	Predicted synthetic growth defect	FSW = 0.1652	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT2G17520	Predicted Reconstituted Complex	FSW = 0.0046	Unknown	IRE1A ENDORIBONUCLEASE/ KINASE
AT4G28860	Predicted Phenotypic Enhancement	FSW = 0.0556	Unknown	CKL4 (CASEIN KINASE I-LIKE 4) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT3G60180	Predicted Affinity Capture-MS	FSW = 0.1687	Unknown	URIDYLATE KINASE PUTATIVE / URIDINE MONOPHOSPHATE KINASE PUTATIVE / UMP KINASE PUTATIVE
AT5G19310	Predicted Colocalization synthetic growth defect	FSW = 0.0786	Unknown	HOMEOTIC GENE REGULATOR PUTATIVE
AT5G14170	Predicted two hybrid	FSW = 0.0100	Unknown	CHC1
AT5G59710	Predicted interaction prediction interologs mapping	FSW = 0.0415	Unknown	VIP2 (VIRE2 INTERACTING PROTEIN2) PROTEIN BINDING / TRANSCRIPTION REGULATOR
AT3G13445	Predicted Synthetic Lethality Synthetic Lethality Affinity Capture-MS Affinity Capture-Western Phenotypic Enhancement interologs mapping interaction prediction	FSW = 0.2037	Unknown	TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT3G16980	Predicted Synthetic Lethality	FSW = 0.0093	Unknown	NRPB9A DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ NUCLEIC ACID BINDING / TRANSCRIPTION REGULATOR/ ZINC ION BINDING
AT2G44510	Predicted Synthetic Lethality	FSW = 0.0038	Unknown	P21CIP1-BINDING PROTEIN-RELATED
AT4G31720	Predicted interaction prediction Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Co-purification interologs mapping	FSW = 0.0940	Unknown	TAFII15 (TBP-ASSOCIATED FACTOR II 15) RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION FACTOR
AT2G47620	Predicted Affinity Capture-MS	FSW = 0.0759	Unknown	ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING
AT5G25150	Predicted interaction prediction Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Co-purification interologs mapping	FSW = 0.0669	Unknown	TAF5 (TBP-ASSOCIATED FACTOR 5) NUCLEOTIDE BINDING / TRANSCRIPTION REGULATOR
AT2G37470	Predicted Phenotypic Suppression	FSW = 0.0161	Unknown	HISTONE H2B PUTATIVE
AT1G28460	Predicted Phenotypic Enhancement	FSW = 0.0795	Unknown	AGL59 (AGAMOUS-LIKE 59) DNA BINDING / TRANSCRIPTION FACTOR
AT2G13370	Predicted Affinity Capture-MS	FSW = 0.0767	Unknown	CHR5 (CHROMATIN REMODELING 5) ATP BINDING / DNA BINDING / CHROMATIN BINDING / HELICASE/ NUCLEIC ACID BINDING
AT4G25340	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Synthetic Rescue	FSW = 0.1811	Unknown	IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT1G20140	Predicted Synthetic Lethality	FSW = 0.0037	Unknown	ASK4 (ARABIDOPSIS SKP1-LIKE 4) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G60980	Predicted Synthetic Rescue	FSW = 0.0391	Unknown	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT3G49920	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0986	Unknown	VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5) VOLTAGE-GATED ANION CHANNEL
AT2G30160	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.3133	Unknown	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT2G18450	Predicted Affinity Capture-MS	FSW = 0.0065	Unknown	SDH1-2 SUCCINATE DEHYDROGENASE
AT5G02730	Predicted Phenotypic Suppression	FSW = 0.0551	Unknown	ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT4G33710	Predicted Phenotypic Enhancement	FSW = 0.0308	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT1G50060	Predicted Synthetic Lethality	FSW = 0.0045	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT4G07820	Predicted Synthetic Lethality	FSW = 0.0081	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT1G01020	Predicted Synthetic Lethality	FSW = 0.0159	Unknown	ARV1
AT3G07140	Predicted Synthetic Lethality synthetic growth defect Synthetic Lethality Phenotypic Enhancement	FSW = 0.1456	Unknown	GPI TRANSAMIDASE COMPONENT GPI16 SUBUNIT FAMILY PROTEIN
AT5G47720	Predicted Phenotypic Enhancement	FSW = 0.0284	Unknown	ACETYL-COA C-ACYLTRANSFERASE PUTATIVE / 3-KETOACYL-COA THIOLASE PUTATIVE
AT3G60360	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1831	Unknown	EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14)
AT4G39200	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Synthetic Lethality synthetic growth defect	FSW = 0.2794	Unknown	40S RIBOSOMAL PROTEIN S25 (RPS25E)
AT5G12020	Predicted two hybrid	FSW = 0.0057	Unknown	HSP176II (176 KDA CLASS II HEAT SHOCK PROTEIN)
AT4G13090	Predicted Synthetic Lethality	FSW = 0.0122	Unknown	XYLOGLUCANXYLOGLUCOSYL TRANSFERASE PUTATIVE / XYLOGLUCAN ENDOTRANSGLYCOSYLASE PUTATIVE / ENDO-XYLOGLUCAN TRANSFERASE PUTATIVE
AT4G17190	Predicted Phenotypic Enhancement Affinity Capture-MS	FSW = 0.1139	Unknown	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT1G54140	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Co-purification Synthetic Lethality interologs mapping interaction prediction	FSW = 0.0764	Unknown	TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT) DNA BINDING / TRANSCRIPTION INITIATION FACTOR
AT3G12400	Predicted two hybrid	FSW = 0.0110	Unknown	ELC UBIQUITIN BINDING
AT1G64550	Predicted two hybrid	FSW = 0.0050	Unknown	ATGCN3 TRANSPORTER
AT2G17930	Predicted co-fractionation Co-fractionation interologs mapping interaction prediction Co-expression	FSW = 0.0722	Unknown	BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR
AT3G03570	Predicted two hybrid	FSW = 0.0181	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CYTOSOL EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S UNCHARACTERISED CONSERVED PROTEIN UCP013022 (INTERPROIPR016607) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS SIGNAL TRANSDUCER (TAIRAT4G400501) HAS 153 BLAST HITS TO 150 PROTEINS IN 45 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 104 FUNGI - 0 PLANTS - 38 VIRUSES - 0 OTHER EUKARYOTES - 11 (SOURCE NCBI BLINK)
AT3G07300	Predicted interaction prediction two hybrid	FSW = 0.0025	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR 2B FAMILY PROTEIN / EIF-2B FAMILY PROTEIN
AT3G07790	Predicted two hybrid	FSW = 0.0078	Unknown	DGCR14-RELATED
AT3G44010	Predicted two hybrid	FSW = 0.0106	Unknown	40S RIBOSOMAL PROTEIN S29 (RPS29B)
AT4G33865	Predicted two hybrid	FSW = 0.0253	Unknown	40S RIBOSOMAL PROTEIN S29 (RPS29C)
AT4G36080	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western co-fractionation Co-fractionation Affinity Capture-Western Affinity Capture-MS	FSW = 0.0930	Unknown	FAT DOMAIN-CONTAINING PROTEIN / PHOSPHATIDYLINOSITOL 3- AND 4-KINASE FAMILY PROTEIN
AT4G38440	Predicted two hybrid	FSW = 0.0071	Unknown	LOCATED IN CHLOROPLAST EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 12 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S RNA POLYMERASE II-ASSOCIATED PROTEIN 1 C-TERMINAL (INTERPROIPR013929) RNA POLYMERASE II-ASSOCIATED PROTEIN 1 N-TERMINAL (INTERPROIPR013930) HAS 210 BLAST HITS TO 166 PROTEINS IN 68 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 135 FUNGI - 41 PLANTS - 22 VIRUSES - 0 OTHER EUKARYOTES - 10 (SOURCE NCBI BLINK)
AT4G40050	Predicted two hybrid	FSW = 0.0070	Unknown	SIGNAL TRANSDUCER
AT5G06160	Predicted two hybrid	FSW = 0.0015	Unknown	ATO (ATROPOS) NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G13860	Predicted two hybrid	FSW = 0.0542	Unknown	ELC-LIKE (ELCH-LIKE) SMALL CONJUGATING PROTEIN LIGASE
AT2G26210	Predicted two hybrid	FSW = 0.0238	Unknown	ANKYRIN REPEAT FAMILY PROTEIN
AT1G01930	Predicted Synthetic Lethality	FSW = 0.0116	Unknown	ZINC FINGER PROTEIN-RELATED
AT1G02100	Predicted Affinity Capture-MS	FSW = 0.1115	Unknown	LEUCINE CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
AT1G04950	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western Reconstituted Complex Co-purification interologs mapping interaction prediction	FSW = 0.1128	Unknown	TAF6 (TBP-ASSOCIATED FACTOR 6) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION INITIATION FACTOR
AT1G07705	Predicted Affinity Capture-Western	FSW = 0.0339	Unknown	TRANSCRIPTION REGULATOR
AT1G19750	Predicted synthetic growth defect Synthetic Lethality Phenotypic Enhancement	FSW = 0.1832	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G20693	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1852	Unknown	HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G27040	Predicted Phenotypic Suppression	FSW = 0.0740	Unknown	NITRATE TRANSPORTER PUTATIVE
AT1G29970	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.0927	Unknown	RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)
AT1G32750	Predicted Affinity Capture-MS Affinity Capture-MS Reconstituted Complex Affinity Capture-MS	FSW = 0.0639	Unknown	HAF01 DNA BINDING / HISTONE ACETYLTRANSFERASE
AT1G35350	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1367	Unknown	LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK)
AT1G52500	Predicted Phenotypic Enhancement	FSW = 0.1701	Unknown	ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G60680	Predicted Synthetic Lethality	FSW = 0.0589	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G66740	Predicted Synthetic Lethality	FSW = 0.0412	Unknown	SGA2
AT1G68020	Predicted Phenotypic Enhancement	FSW = 0.1115	Unknown	ATTPS6 ALPHAALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT1G68530	Predicted Synthetic Lethality	FSW = 0.0408	Unknown	KCS6 (3-KETOACYL-COA SYNTHASE 6) CATALYTIC/ TRANSFERASE TRANSFERRING ACYL GROUPS OTHER THAN AMINO-ACYL GROUPS
AT1G78050	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0330	Unknown	PGM (PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE) CATALYTIC/ INTRAMOLECULAR TRANSFERASE PHOSPHOTRANSFERASES
AT2G15790	Predicted Synthetic Lethality	FSW = 0.0123	Unknown	SQN (SQUINT) PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT2G24960	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1083	Unknown	UNKNOWN PROTEIN
AT2G33240	Predicted Colocalization	FSW = 0.0106	Unknown	XID MOTOR/ PROTEIN BINDING
AT2G33560	Predicted Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS	FSW = 0.0685	Unknown	SPINDLE CHECKPOINT PROTEIN-RELATED
AT2G34750	Predicted Phenotypic Enhancement	FSW = 0.1760	Unknown	RNA POLYMERASE I SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3 FAMILY PROTEIN
AT2G34890	Predicted Affinity Capture-MS	FSW = 0.0873	Unknown	CTP SYNTHASE PUTATIVE / UTP--AMMONIA LIGASE PUTATIVE
AT2G37420	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.2950	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT2G43790	Predicted Affinity Capture-Western	FSW = 0.0014	Unknown	ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6) MAP KINASE/ KINASE
AT2G48100	Predicted Phenotypic Enhancement	FSW = 0.1381	Unknown	EXONUCLEASE FAMILY PROTEIN
AT3G01590	Predicted Synthetic Lethality	FSW = 0.0122	Unknown	ALDOSE 1-EPIMERASE FAMILY PROTEIN
AT3G06483	Predicted Synthetic Lethality Phenotypic Enhancement synthetic growth defect	FSW = 0.0878	Unknown	PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE
AT3G09640	Predicted Affinity Capture-Western Affinity Capture-MS Phenotypic Enhancement	FSW = 0.1597	Unknown	APX2 (ASCORBATE PEROXIDASE 2) L-ASCORBATE PEROXIDASE
AT3G10070	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Reconstituted Complex Affinity Capture-Western Co-purification	FSW = 0.0483	Unknown	TAF12 (TBP-ASSOCIATED FACTOR 12) DNA BINDING / TRANSCRIPTION INITIATION FACTOR
AT3G11230	Predicted Synthetic Lethality synthetic growth defect Synthetic Lethality	FSW = 0.2092	Unknown	YIPPEE FAMILY PROTEIN
AT3G22860	Predicted Synthetic Lethality	FSW = 0.0089	Unknown	TIF3C2 TRANSLATION INITIATION FACTOR
AT3G26690	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0349	Unknown	ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13) BIS(5-ADENOSYL)-PENTAPHOSPHATASE/ HYDROLASE
AT3G45630	Predicted synthetic growth defect	FSW = 0.0476	Unknown	RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT3G50780	Predicted Phenotypic Enhancement	FSW = 0.0640	Unknown	INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS PRLI-INTERACTING FACTOR-RELATED (TAIRAT1G638501) HAS 173 BLAST HITS TO 173 PROTEINS IN 14 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 8 FUNGI - 0 PLANTS - 164 VIRUSES - 0 OTHER EUKARYOTES - 1 (SOURCE NCBI BLINK)
AT3G54380	Predicted Affinity Capture-MS	FSW = 0.0295	Unknown	SAC3/GANP FAMILY PROTEIN
AT3G58560	Predicted synthetic growth defect	FSW = 0.0176	Unknown	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN
AT4G04695	Predicted Phenotypic Enhancement	FSW = 0.0850	Unknown	CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT1G07820	Predicted Phenotypic Enhancement	FSW = 0.0274	Unknown	HISTONE H4
AT1G11510	Predicted Synthetic Lethality	FSW = 0.1054	Unknown	DNA-BINDING STOREKEEPER PROTEIN-RELATED
AT1G13580	Predicted Phenotypic Enhancement	FSW = 0.2610	Unknown	LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)
AT1G21370	Predicted Phenotypic Enhancement	FSW = 0.0546	Unknown	UNKNOWN PROTEIN
AT1G25155	Predicted synthetic growth defect	FSW = 0.1042	Unknown	ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT1G26320	Predicted Phenotypic Enhancement	FSW = 0.1186	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT1G52740	Predicted synthetic growth defect	FSW = 0.0440	Unknown	HTA9 (HISTONE H2A PROTEIN 9) DNA BINDING
AT1G78770	Predicted Synthetic Lethality	FSW = 0.1102	Unknown	CELL DIVISION CYCLE FAMILY PROTEIN
AT3G11240	Predicted Phenotypic Enhancement	FSW = 0.1310	Unknown	ATE2 (ARGININE-TRNA PROTEIN TRANSFERASE 2) ARGINYLTRANSFERASE
AT3G47290	Predicted Phenotypic Enhancement	FSW = 0.0527	Unknown	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
AT4G04885	Predicted two hybrid	FSW = 0.0180	Unknown	PCFS4 (PCF11P-SIMILAR PROTEIN 4) ZINC ION BINDING
AT5G03220	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.0185	Unknown	TRANSCRIPTIONAL CO-ACTIVATOR-RELATED
AT5G04800	Predicted Phenotypic Enhancement	FSW = 0.0880	Unknown	40S RIBOSOMAL PROTEIN S17 (RPS17D)
AT5G10790	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Co-purification	FSW = 0.0935	Unknown	UBP22 (UBIQUITIN-SPECIFIC PROTEASE 22) UBIQUITIN THIOLESTERASE/ UBIQUITIN-SPECIFIC PROTEASE/ ZINC ION BINDING
AT5G14060	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.3215	Unknown	CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE
AT5G54940	Predicted Phenotypic Enhancement	FSW = 0.0776	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT4G35620	Predicted Affinity Capture-MS	FSW = 0.0070	Unknown	CYCB22 (CYCLIN B22) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT4G36050	Predicted Phenotypic Enhancement	FSW = 0.1247	Unknown	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN
AT4G38250	Predicted Synthetic Lethality	FSW = 0.0740	Unknown	AMINO ACID TRANSPORTER FAMILY PROTEIN
AT5G01770	Predicted Phenotypic Enhancement	FSW = 0.0811	Unknown	RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING
AT5G10400	Predicted Affinity Capture-MS	FSW = 0.0231	Unknown	HISTONE H3
AT5G18230	Predicted synthetic growth defect	FSW = 0.0873	Unknown	TRANSCRIPTION REGULATOR NOT2/NOT3/NOT5 FAMILY PROTEIN
AT5G45620	Predicted Phenotypic Enhancement	FSW = 0.1277	Unknown	26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9)
AT5G46280	Predicted Synthetic Lethality	FSW = 0.0119	Unknown	DNA REPLICATION LICENSING FACTOR PUTATIVE
AT5G64760	Predicted Phenotypic Enhancement	FSW = 0.1633	Unknown	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)
AT2G10440	Predicted interologs mapping interaction prediction	FSW = 0.1019	Unknown	UNKNOWN PROTEIN
AT3G48150	Predicted interaction prediction	FSW = 0.0187	Unknown	APC8 (ANAPHASE-PROMOTING COMPLEX SUBUNIT 8) BINDING
AT3G19670	Predicted interaction prediction	FSW = 0.0095	Unknown	PROTEIN BINDING
AT1G66500	Predicted interaction prediction	FSW = 0.0101	Unknown	ZINC FINGER (C2H2-TYPE) FAMILY PROTEIN

Downloads

Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

AtPIN will be upgraded. Please send your suggestions here

AT4G16420 - ( ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA binding / transcription coactivator/ transcription factor )

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