Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G35350 - ( LOCATED IN integral to membrane EXPRESSED IN 18 plant structures EXPRESSED DURING 9 growth stages CONTAINS InterPro DOMAIN/s EXS C-terminal (InterProIPR004342) SPX N-terminal (InterProIPR004331) BEST Arabidopsis thaliana protein match is EXS family protein / ERD1/XPR1/SYG1 family protein (TAIRAT1G267301) Has 734 Blast hits to 697 proteins in 158 species Archae - 0 Bacteria - 21 Metazoa - 234 Fungi - 245 Plants - 125 Viruses - 0 Other Eukaryotes - 109 (source NCBI BLink) )
96 Proteins interacs with AT1G35350Locus | Method | FSW | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT3G47520 | Predictedsynthetic growth defect | FSW = 0.0570
| Unknown | MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR |
AT1G20260 | Predictedsynthetic growth defectPhenotypic Enhancement | FSW = 0.2451
| Unknown | HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM |
AT3G28715 | Predictedsynthetic growth defect | FSW = 0.0785
| Unknown | H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE |
AT5G13450 | PredictedPhenotypic Enhancement | FSW = 0.0744
| Unknown | ATP SYNTHASE DELTA CHAIN MITOCHONDRIAL PUTATIVE / H(+)-TRANSPORTING TWO-SECTOR ATPASE DELTA (OSCP) SUBUNIT PUTATIVE |
AT1G74560 | PredictedSynthetic Lethalitysynthetic growth defect | FSW = 0.3791
| Unknown | NRP1 (NAP1-RELATED PROTEIN 1) DNA BINDING / CHROMATIN BINDING / HISTONE BINDING |
AT3G22890 | PredictedSynthetic LethalitySynthetic LethalitySynthetic LethalitySynthetic LethalityPhenotypic Enhancement | FSW = 0.4465
| Unknown | APS1 (ATP SULFURYLASE 1) SULFATE ADENYLYLTRANSFERASE (ATP) |
AT4G33650 | PredictedPhenotypic EnhancementSynthetic Lethalitysynthetic growth defect | FSW = 0.2086
| Unknown | DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP BINDING / GTPASE/ PHOSPHOINOSITIDE BINDING |
AT5G09660 | Predictedsynthetic growth defectSynthetic Lethality | FSW = 0.3610
| Unknown | PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2) MALATE DEHYDROGENASE |
AT3G48170 | PredictedPhenotypic Enhancement | FSW = 0.1383
| Unknown | ALDH10A9 3-CHLOROALLYL ALDEHYDE DEHYDROGENASE/ OXIDOREDUCTASE |
AT1G74710 | Predictedsynthetic growth defect | FSW = 0.3152
| Unknown | ISOCHORISMATE SYNTHASE 1 (ICS1) / ISOCHORISMATE MUTASE |
AT1G64190 | PredictedAffinity Capture-MS | FSW = 0.1537
| Unknown | 6-PHOSPHOGLUCONATE DEHYDROGENASE FAMILY PROTEIN |
AT5G51820 | PredictedSynthetic LethalityPhenotypic Enhancementsynthetic growth defect | FSW = 0.1750
| Unknown | PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE |
AT4G25910 | Predictedsynthetic growth defect | FSW = 0.1280
| Unknown | NFU3 STRUCTURAL MOLECULE |
AT5G15450 | Predictedsynthetic growth defect | FSW = 0.2118
| Unknown | CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING |
AT1G48860 | PredictedSynthetic Lethality | FSW = 0.3218
| Unknown | 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE PUTATIVE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PUTATIVE / EPSP SYNTHASE PUTATIVE |
AT5G60540 | PredictedPhenotypic Enhancementsynthetic growth defect | FSW = 0.3096
| Unknown | PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION |
AT3G13560 | PredictedSynthetic Lethality | FSW = 0.0142
| Unknown | GLYCOSYL HYDROLASE FAMILY 17 PROTEIN |
AT1G20090 | Predictedsynthetic growth defect | FSW = 0.0798
| Unknown | ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) GTP BINDING |
AT1G04750 | Predictedsynthetic growth defectSynthetic LethalitySynthetic Lethality | FSW = 0.3514
| Unknown | VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721) |
AT4G24400 | PredictedSynthetic Lethality | FSW = 0.0181
| Unknown | CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) KINASE/ PROTEIN KINASE |
AT1G69480 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.0323
| Unknown | EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN |
AT1G80050 | PredictedSynthetic LethalityPhenotypic Enhancementsynthetic growth defect | FSW = 0.2343
| Unknown | APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) ADENINE PHOSPHORIBOSYLTRANSFERASE/ PHOSPHATE TRANSMEMBRANE TRANSPORTER |
AT4G28860 | PredictedPhenotypic Enhancement | FSW = 0.0906
| Unknown | CKL4 (CASEIN KINASE I-LIKE 4) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT2G44680 | Predictedsynthetic growth defect | FSW = 0.0400
| Unknown | CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE |
AT1G21700 | Predictedsynthetic growth defectSynthetic Lethality | FSW = 0.2114
| Unknown | ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C) DNA BINDING |
AT1G64880 | PredictedSynthetic Lethality | FSW = 0.2072
| Unknown | RIBOSOMAL PROTEIN S5 FAMILY PROTEIN |
AT5G24090 | PredictedSynthetic Lethality | FSW = 0.2227
| Unknown | ACIDIC ENDOCHITINASE (CHIB1) |
AT3G54840 | PredictedPhenotypic Enhancement | FSW = 0.1829
| Unknown | ARA6 GTP BINDING / GTPASE |
AT3G60360 | PredictedSynthetic Lethality | FSW = 0.1152
| Unknown | EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14) |
AT4G39200 | PredictedSynthetic Lethalitysynthetic growth defect | FSW = 0.2513
| Unknown | 40S RIBOSOMAL PROTEIN S25 (RPS25E) |
AT1G62800 | Predictedsynthetic growth defect | FSW = 0.2091
| Unknown | ASP4 (ASPARTATE AMINOTRANSFERASE 4) CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING / TRANSAMINASE/ TRANSFERASE TRANSFERRING NITROGENOUS GROUPS |
AT4G16420 | PredictedSynthetic LethalitySynthetic Lethality | FSW = 0.1367
| Unknown | ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR |
AT2G42120 | PredictedSynthetic Lethality | FSW = 0.1193
| Unknown | POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT) DNA BINDING / DNA-DIRECTED DNA POLYMERASE |
AT1G10210 | PredictedSynthetic LethalitySynthetic LethalityPhenotypic Enhancement | FSW = 0.1340
| Unknown | ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE |
AT1G21370 | Predictedsynthetic growth defect | FSW = 0.2402
| Unknown | UNKNOWN PROTEIN |
AT1G25155 | Predictedsynthetic growth defectPhenotypic Enhancement | FSW = 0.3568
| Unknown | ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE |
AT1G06550 | PredictedSynthetic Lethality | FSW = 0.0826
| Unknown | ENOYL-COA HYDRATASE/ISOMERASE FAMILY PROTEIN |
AT1G11510 | Predictedsynthetic growth defect | FSW = 0.2779
| Unknown | DNA-BINDING STOREKEEPER PROTEIN-RELATED |
AT1G27320 | PredictedPhenotypic Enhancement | FSW = 0.1440
| Unknown | AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) CYTOKININ RECEPTOR/ OSMOSENSOR/ PROTEIN HISTIDINE KINASE |
AT1G47830 | Predictedsynthetic growth defectSynthetic Lethality | FSW = 0.3476
| Unknown | CLATHRIN COAT ASSEMBLY PROTEIN PUTATIVE |
AT1G52500 | PredictedSynthetic Lethality | FSW = 0.2121
| Unknown | ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE |
AT1G66590 | PredictedSynthetic LethalitySynthetic LethalitySynthetic Lethalitysynthetic growth defectPhenotypic Enhancement | FSW = 0.3430
| Unknown | COX19 FAMILY PROTEIN |
AT1G74810 | PredictedSynthetic Lethality | FSW = 0.1636
| Unknown | BOR5 ANION EXCHANGER |
AT1G76920 | PredictedPhenotypic Enhancement | FSW = 0.0402
| Unknown | F-BOX FAMILY PROTEIN (FBX3) |
AT1G78770 | Predictedsynthetic growth defect | FSW = 0.2642
| Unknown | CELL DIVISION CYCLE FAMILY PROTEIN |
AT2G01600 | PredictedSynthetic LethalityPhenotypic Enhancementsynthetic growth defect | FSW = 0.2291
| Unknown | EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN |
AT2G32160 | PredictedSynthetic LethalityPhenotypic Enhancementsynthetic growth defect | FSW = 0.2800
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S N2227-LIKE (INTERPROIPR012901) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G321701) HAS 325 BLAST HITS TO 315 PROTEINS IN 141 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 95 FUNGI - 130 PLANTS - 30 VIRUSES - 0 OTHER EUKARYOTES - 70 (SOURCE NCBI BLINK) |
AT2G38600 | PredictedPhenotypic Enhancement | FSW = 0.0341
| Unknown | ACID PHOSPHATASE CLASS B FAMILY PROTEIN |
AT2G48100 | PredictedSynthetic Lethalitysynthetic growth defect | FSW = 0.2103
| Unknown | EXONUCLEASE FAMILY PROTEIN |
AT3G18660 | Predictedsynthetic growth defectPhenotypic EnhancementSynthetic Lethality | FSW = 0.2591
| Unknown | PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS |
AT3G22290 | PredictedReconstituted ComplexAffinity Capture-MS | FSW = 0.7671
| Unknown | UNKNOWN PROTEIN |
AT3G24010 | Predictedsynthetic growth defect | FSW = 0.2421
| Unknown | ING1 (INHIBITOR OF GROWTH 1) DNA BINDING / METHYLATED HISTONE RESIDUE BINDING |
AT3G25900 | Predictedsynthetic growth defectSynthetic Lethality | FSW = 0.2617
| Unknown | HMT-1 HOMOCYSTEINE S-METHYLTRANSFERASE |
AT3G45240 | Predictedsynthetic growth defectSynthetic LethalitySynthetic LethalityPhenotypic Enhancement | FSW = 0.3437
| Unknown | GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1) KINASE |
AT3G47290 | Predictedsynthetic growth defect | FSW = 0.2146
| Unknown | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
AT3G53030 | Predictedsynthetic growth defect | FSW = 0.2618
| Unknown | SRPK4 (SER/ARG-RICH PROTEIN KINASE 4) KINASE/ PROTEIN KINASE |
AT3G59540 | PredictedSynthetic Lethalitysynthetic growth defect | FSW = 0.2097
| Unknown | 60S RIBOSOMAL PROTEIN L38 (RPL38B) |
AT3G61740 | PredictedSynthetic Lethality | FSW = 0.0640
| Unknown | SDG14 (SET DOMAIN PROTEIN 14) DNA BINDING / PROTEIN BINDING / ZINC ION BINDING |
AT4G14000 | PredictedSynthetic Lethality | FSW = 0.0777
| Unknown | UNKNOWN PROTEIN |
AT4G21490 | Predictedsynthetic growth defectSynthetic Lethality | FSW = 0.3587
| Unknown | NDB3 NADH DEHYDROGENASE |
AT4G24160 | PredictedPhenotypic EnhancementSynthetic Lethality | FSW = 0.1510
| Unknown | HYDROLASE ALPHA/BETA FOLD FAMILY PROTEIN |
AT4G27130 | PredictedSynthetic LethalitySynthetic Lethality | FSW = 0.6044
| Unknown | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE |
AT4G27960 | PredictedSynthetic Lethality | FSW = 0.1039
| Unknown | UBC9 (UBIQUITIN CONJUGATING ENZYME 9) UBIQUITIN-PROTEIN LIGASE |
AT4G29580 | Predictedsynthetic growth defect | FSW = 0.3150
| Unknown | CYTIDINE DEAMINASE PUTATIVE / CYTIDINE AMINOHYDROLASE PUTATIVE |
AT5G04800 | PredictedPhenotypic Enhancement | FSW = 0.1035
| Unknown | 40S RIBOSOMAL PROTEIN S17 (RPS17D) |
AT5G13860 | PredictedPhenotypic Enhancementsynthetic growth defect | FSW = 0.1186
| Unknown | ELC-LIKE (ELCH-LIKE) SMALL CONJUGATING PROTEIN LIGASE |
AT5G16170 | Predictedsynthetic growth defectPhenotypic EnhancementSynthetic Lethality | FSW = 0.2302
| Unknown | UNKNOWN PROTEIN |
AT5G16980 | Predictedsynthetic growth defectSynthetic Lethality | FSW = 0.4017
| Unknown | NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE |
AT5G17860 | Predictedsynthetic growth defectPhenotypic Enhancement | FSW = 0.2752
| Unknown | CAX7 (CALCIUM EXCHANGER 7) CALCIUMSODIUM ANTIPORTER/ CATIONCATION ANTIPORTER |
AT5G20340 | Predictedsynthetic growth defect | FSW = 0.2484
| Unknown | BG5 (BETA-13-GLUCANASE 5) GLUCAN 13-BETA-GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS |
AT5G38890 | PredictedPhenotypic Enhancement | FSW = 0.0317
| Unknown | EXORIBONUCLEASE-RELATED |
AT5G45620 | Predictedsynthetic growth defect | FSW = 0.3982
| Unknown | 26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9) |
AT5G60550 | PredictedSynthetic Lethality | FSW = 0.0763
| Unknown | GRIK2 (GEMINIVIRUS REP INTERACTING KINASE 2) KINASE |
AT1G43910 | PredictedSynthetic Lethalitysynthetic growth defect | FSW = 0.2204
| Unknown | AAA-TYPE ATPASE FAMILY PROTEIN |
AT1G60680 | Predictedsynthetic growth defect | FSW = 0.1751
| Unknown | ALDO/KETO REDUCTASE FAMILY PROTEIN |
AT1G79210 | Predictedsynthetic growth defect | FSW = 0.0214
| Unknown | 20S PROTEASOME ALPHA SUBUNIT B PUTATIVE |
AT2G03250 | Predictedsynthetic growth defect | FSW = 0.2358
| Unknown | EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN |
AT2G24960 | Predictedsynthetic growth defect | FSW = 0.2220
| Unknown | UNKNOWN PROTEIN |
AT2G30800 | Predictedsynthetic growth defect | FSW = 0.1308
| Unknown | HVT1 (HELICASE IN VASCULAR TISSUE AND TAPETUM) ATP BINDING / HELICASE/ NUCLEIC ACID BINDING |
AT2G37420 | PredictedSynthetic Lethalitysynthetic growth defect | FSW = 0.2252
| Unknown | KINESIN MOTOR PROTEIN-RELATED |
AT2G37925 | Predictedsynthetic growth defect | FSW = 0.0698
| Unknown | COPT4 COPPER ION TRANSMEMBRANE TRANSPORTER/ HIGH AFFINITY COPPER ION TRANSMEMBRANE TRANSPORTER |
AT2G38490 | Predictedsynthetic growth defect | FSW = 0.0815
| Unknown | CIPK22 (CBL-INTERACTING PROTEIN KINASE 22) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE |
AT3G02320 | Predictedsynthetic growth defect | FSW = 0.2028
| Unknown | RNA BINDING / TRNA (GUANINE-N2-)-METHYLTRANSFERASE |
AT3G03080 | Predictedsynthetic growth defect | FSW = 0.1124
| Unknown | NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE |
AT3G21460 | Predictedsynthetic growth defect | FSW = 0.1427
| Unknown | ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE |
AT4G12620 | Predictedsynthetic growth defect | FSW = 0.0669
| Unknown | ORC1B (ORIGIN OF REPLICATION COMPLEX 1B) DNA BINDING / DOUBLE-STRANDED METHYLATED DNA BINDING / PROTEIN BINDING |
AT4G12790 | Predictedsynthetic growth defect | FSW = 0.0377
| Unknown | ATP-BINDING FAMILY PROTEIN |
AT4G19880 | Predictedsynthetic growth defect | FSW = 0.1281
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RESPONSE TO CADMIUM ION LOCATED IN CHLOROPLAST EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S GLUTATHIONE S-TRANSFERASE PREDICTED (INTERPROIPR016639) GLUTATHIONE S-TRANSFERASE C-TERMINAL (INTERPROIPR004046) GLUTATHIONE S-TRANSFERASE C-TERMINAL-LIKE (INTERPROIPR010987) GLUTATHIONE S-TRANSFERASE/CHLORIDE CHANNEL C-TERMINAL (INTERPROIPR017933) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G450201) HAS 1635 BLAST HITS TO 1635 PROTEINS IN 489 SPECIES ARCHAE - 12 BACTERIA - 905 METAZOA - 23 FUNGI - 158 PLANTS - 57 VIRUSES - 0 OTHER EUKARYOTES - 480 (SOURCE NCBI BLINK) |
AT4G22140 | Predictedsynthetic growth defect | FSW = 0.0614
| Unknown | DNA BINDING / PROTEIN BINDING / ZINC ION BINDING |
AT4G25950 | PredictedSynthetic Lethalitysynthetic growth defect | FSW = 0.1699
| Unknown | VATG3 (VACUOLAR ATP SYNTHASE G3) HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES |
AT4G36050 | Predictedsynthetic growth defect | FSW = 0.1989
| Unknown | ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN |
AT5G01770 | PredictedPhenotypic Enhancement | FSW = 0.3114
| Unknown | RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING |
AT5G05420 | Predictedsynthetic growth defect | FSW = 0.0350
| Unknown | IMMUNOPHILIN PUTATIVE / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PUTATIVE |
AT5G26250 | PredictedSynthetic Lethality | FSW = 0.0803
| Unknown | SUGAR TRANSPORTER PUTATIVE |
AT5G49930 | Predictedsynthetic growth defect | FSW = 0.0697
| Unknown | EMB1441 (EMBRYO DEFECTIVE 1441) NUCLEIC ACID BINDING / ZINC ION BINDING |
AT5G49970 | Predictedsynthetic growth defect | FSW = 0.2578
| Unknown | ATPPOX (A THALIANA PYRIDOXIN (PYRODOXAMINE) 5-PHOSPHATE OXIDASE) PYRIDOXAMINE-PHOSPHATE OXIDASE |
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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454