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AT4G21490 - ( NDB3 NADH dehydrogenase )

118 Proteins interacs with AT4G21490

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT2G17360	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.1301	Unknown	40S RIBOSOMAL PROTEIN S4 (RPS4A)
AT3G47520	Predicted synthetic growth defect	FSW = 0.0421	Unknown	MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT4G16660	Predicted synthetic growth defect	FSW = 0.1878	Unknown	HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE
AT1G72730	Predicted Phenotypic Enhancement	FSW = 0.0077	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR 4A PUTATIVE / EIF-4A PUTATIVE
AT1G76040	Predicted Affinity Capture-MS	FSW = 0.0354	Unknown	CPK29 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT5G13450	Predicted Phenotypic Enhancement	FSW = 0.1011	Unknown	ATP SYNTHASE DELTA CHAIN MITOCHONDRIAL PUTATIVE / H(+)-TRANSPORTING TWO-SECTOR ATPASE DELTA (OSCP) SUBUNIT PUTATIVE
AT2G20800	Predicted Phylogenetic profile method Co-expression	FSW = 0.0593	Unknown	NDB4 (NAD(P)H DEHYDROGENASE B4) NADH DEHYDROGENASE
AT2G29990	Predicted Phylogenetic profile method Co-expression	FSW = 0.0281	Unknown	NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2) FAD BINDING / NADH DEHYDROGENASE/ OXIDOREDUCTASE
AT4G05020	Predicted Phylogenetic profile method Co-expression	FSW = 0.0308	Unknown	NDB2 (NAD(P)H DEHYDROGENASE B2) FAD BINDING / DISULFIDE OXIDOREDUCTASE/ OXIDOREDUCTASE
AT3G22890	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.2250	Unknown	APS1 (ATP SULFURYLASE 1) SULFATE ADENYLYLTRANSFERASE (ATP)
AT5G09660	Predicted Phenotypic Suppression	FSW = 0.3732	Unknown	PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2) MALATE DEHYDROGENASE
AT1G74710	Predicted synthetic growth defect	FSW = 0.2287	Unknown	ISOCHORISMATE SYNTHASE 1 (ICS1) / ISOCHORISMATE MUTASE
AT1G77750	Predicted synthetic growth defect	FSW = 0.0576	Unknown	30S RIBOSOMAL PROTEIN S13 CHLOROPLAST PUTATIVE
AT3G58610	Predicted synthetic growth defect	FSW = 0.2191	Unknown	KETOL-ACID REDUCTOISOMERASE
AT5G54770	Predicted interologs mapping interologs mapping Phenotypic Enhancement interologs mapping	FSW = 0.1417	Unknown	THI1 PROTEIN HOMODIMERIZATION
AT3G56160	Predicted Synthetic Rescue	FSW = 0.1660	Unknown	BILE ACIDSODIUM SYMPORTER
AT1G56050	Predicted Phenotypic Enhancement	FSW = 0.0506	Unknown	GTP-BINDING PROTEIN-RELATED
AT5G15450	Predicted synthetic growth defect	FSW = 0.1432	Unknown	CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT3G23600	Predicted Affinity Capture-MS	FSW = 0.0098	Unknown	DIENELACTONE HYDROLASE FAMILY PROTEIN
AT5G63680	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0130	Unknown	PYRUVATE KINASE PUTATIVE
AT1G04750	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.3305	Unknown	VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)
AT3G56760	Predicted two hybrid	FSW = 0.0320	Unknown	CALCIUM-DEPENDENT PROTEIN KINASE PUTATIVE / CDPK PUTATIVE
AT4G22120	Predicted two hybrid	FSW = 0.0181	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT2G47000	Predicted Phenotypic Enhancement Phenotypic Suppression	FSW = 0.0281	Unknown	ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES / XENOBIOTIC-TRANSPORTING ATPASE
AT4G14350	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1338	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT2G19760	Predicted Affinity Capture-MS	FSW = 0.0051	Unknown	PRF1 (PROFILIN 1) ACTIN BINDING
AT2G37790	Predicted Synthetic Lethality	FSW = 0.1156	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT4G18800	Predicted Phenotypic Enhancement	FSW = 0.1385	Unknown	ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D) GTP BINDING
AT4G28220	Predicted Phylogenetic profile method Co-expression	FSW = 0.0556	Unknown	NDB1 (NAD(P)H DEHYDROGENASE B1) NADH DEHYDROGENASE/ DISULFIDE OXIDOREDUCTASE
AT1G07180	Predicted Phylogenetic profile method Co-expression	FSW = 0.1076	Unknown	NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1) NADH DEHYDROGENASE
AT1G21700	Predicted synthetic growth defect synthetic growth defect synthetic growth defect Synthetic Lethality Synthetic Rescue	FSW = 0.2504	Unknown	ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C) DNA BINDING
AT4G34430	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0630	Unknown	CHB3 DNA BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING
AT1G75560	Predicted Affinity Capture-MS	FSW = 0.0179	Unknown	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN
AT4G09800	Predicted Phenotypic Suppression	FSW = 0.0776	Unknown	RPS18C (S18 RIBOSOMAL PROTEIN) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G06960	Predicted Synthetic Lethality	FSW = 0.1192	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN U2B PUTATIVE / SPLICEOSOMAL PROTEIN PUTATIVE
AT2G36170	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.0918	Unknown	UBIQUITIN EXTENSION PROTEIN 2 (UBQ2) / 60S RIBOSOMAL PROTEIN L40 (RPL40A)
AT5G60980	Predicted Synthetic Lethality	FSW = 0.0556	Unknown	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT3G01020	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.0806	Unknown	ISU2 (ISCU-LIKE 2) STRUCTURAL MOLECULE
AT1G64880	Predicted Synthetic Lethality	FSW = 0.1349	Unknown	RIBOSOMAL PROTEIN S5 FAMILY PROTEIN
AT5G24090	Predicted Synthetic Lethality	FSW = 0.1217	Unknown	ACIDIC ENDOCHITINASE (CHIB1)
AT4G30320	Predicted synthetic growth defect	FSW = 0.0454	Unknown	ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT3G54840	Predicted Phenotypic Enhancement	FSW = 0.1712	Unknown	ARA6 GTP BINDING / GTPASE
AT3G07140	Predicted synthetic growth defect	FSW = 0.1006	Unknown	GPI TRANSAMIDASE COMPONENT GPI16 SUBUNIT FAMILY PROTEIN
AT2G05170	Predicted Synthetic Lethality	FSW = 0.1164	Unknown	ATVPS11 BINDING / PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING
AT3G02560	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0931	Unknown	40S RIBOSOMAL PROTEIN S7 (RPS7B)
AT1G62800	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.2112	Unknown	ASP4 (ASPARTATE AMINOTRANSFERASE 4) CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING / TRANSAMINASE/ TRANSFERASE TRANSFERRING NITROGENOUS GROUPS
AT3G13900	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1465	Unknown	ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM
AT2G29540	Predicted Phenotypic Suppression	FSW = 0.0567	Unknown	ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT1G19730	Predicted Phenotypic Enhancement	FSW = 0.0756	Unknown	ATTRX4 OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR
AT4G17190	Predicted synthetic growth defect	FSW = 0.1739	Unknown	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT1G05180	Predicted Phenotypic Enhancement	FSW = 0.2248	Unknown	AXR1 (AUXIN RESISTANT 1) SMALL PROTEIN ACTIVATING ENZYME
AT1G02100	Predicted Affinity Capture-MS	FSW = 0.0567	Unknown	LEUCINE CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
AT1G10210	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.0995	Unknown	ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE
AT1G13580	Predicted Phenotypic Enhancement	FSW = 0.1427	Unknown	LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)
AT1G20693	Predicted synthetic growth defect Synthetic Lethality Phenotypic Enhancement	FSW = 0.2747	Unknown	HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G21370	Predicted synthetic growth defect	FSW = 0.2154	Unknown	UNKNOWN PROTEIN
AT1G25155	Predicted synthetic growth defect	FSW = 0.2416	Unknown	ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT1G25260	Predicted Affinity Capture-MS	FSW = 0.0287	Unknown	ACIDIC RIBOSOMAL PROTEIN P0-RELATED
AT1G34580	Predicted Affinity Capture-MS	FSW = 0.0740	Unknown	MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G35350	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.3587	Unknown	LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK)
AT1G44180	Predicted synthetic growth defect	FSW = 0.2452	Unknown	AMINOACYLASE PUTATIVE / N-ACYL-L-AMINO-ACID AMIDOHYDROLASE PUTATIVE
AT1G44820	Predicted Affinity Capture-MS	FSW = 0.0237	Unknown	AMINOACYLASE PUTATIVE / N-ACYL-L-AMINO-ACID AMIDOHYDROLASE PUTATIVE
AT1G47830	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.4623	Unknown	CLATHRIN COAT ASSEMBLY PROTEIN PUTATIVE
AT1G59580	Predicted Affinity Capture-MS	FSW = 0.0164	Unknown	ATMPK2 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2) MAP KINASE/ KINASE/ PROTEIN KINASE
AT1G60680	Predicted synthetic growth defect	FSW = 0.1580	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G66590	Predicted synthetic growth defect Synthetic Lethality Synthetic Lethality Synthetic Lethality synthetic growth defect Synthetic Lethality	FSW = 0.3471	Unknown	COX19 FAMILY PROTEIN
AT1G78770	Predicted synthetic growth defect	FSW = 0.2518	Unknown	CELL DIVISION CYCLE FAMILY PROTEIN
AT2G03130	Predicted Phenotypic Enhancement	FSW = 0.1795	Unknown	RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G03250	Predicted synthetic growth defect	FSW = 0.2325	Unknown	EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN
AT2G23820	Predicted Phenotypic Enhancement	FSW = 0.0897	Unknown	METAL-DEPENDENT PHOSPHOHYDROLASE HD DOMAIN-CONTAINING PROTEIN
AT2G24960	Predicted synthetic growth defect	FSW = 0.1888	Unknown	UNKNOWN PROTEIN
AT2G30800	Predicted synthetic growth defect	FSW = 0.0956	Unknown	HVT1 (HELICASE IN VASCULAR TISSUE AND TAPETUM) ATP BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G47090	Predicted Synthetic Lethality	FSW = 0.0258	Unknown	NUCLEIC ACID BINDING / PROTEIN BINDING / ZINC ION BINDING
AT3G02320	Predicted Synthetic Lethality	FSW = 0.1700	Unknown	RNA BINDING / TRNA (GUANINE-N2-)-METHYLTRANSFERASE
AT3G11230	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.2011	Unknown	YIPPEE FAMILY PROTEIN
AT3G18660	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1860	Unknown	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT3G21460	Predicted Synthetic Lethality	FSW = 0.1421	Unknown	ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE
AT3G22290	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.4322	Unknown	UNKNOWN PROTEIN
AT3G24010	Predicted Synthetic Lethality	FSW = 0.2439	Unknown	ING1 (INHIBITOR OF GROWTH 1) DNA BINDING / METHYLATED HISTONE RESIDUE BINDING
AT3G25900	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.2704	Unknown	HMT-1 HOMOCYSTEINE S-METHYLTRANSFERASE
AT3G27110	Predicted Affinity Capture-MS	FSW = 0.0207	Unknown	PEPTIDASE M48 FAMILY PROTEIN
AT3G27440	Predicted Phenotypic Suppression	FSW = 0.0936	Unknown	URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE
AT3G45240	Predicted synthetic growth defect	FSW = 0.3191	Unknown	GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1) KINASE
AT3G47290	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2100	Unknown	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
AT3G53030	Predicted Synthetic Lethality	FSW = 0.2553	Unknown	SRPK4 (SER/ARG-RICH PROTEIN KINASE 4) KINASE/ PROTEIN KINASE
AT1G10090	Predicted synthetic growth defect	FSW = 0.1225	Unknown	UNKNOWN PROTEIN
AT1G11510	Predicted synthetic growth defect	FSW = 0.2250	Unknown	DNA-BINDING STOREKEEPER PROTEIN-RELATED
AT1G55060	Predicted Synthetic Lethality	FSW = 0.0893	Unknown	UBQ12 (UBIQUITIN 12) PROTEIN BINDING
AT2G32415	Predicted Affinity Capture-MS	FSW = 0.0137	Unknown	3-5 EXONUCLEASE/ NUCLEIC ACID BINDING
AT3G43980	Predicted Synthetic Rescue	FSW = 0.0427	Unknown	40S RIBOSOMAL PROTEIN S29 (RPS29A)
AT3G47610	Predicted Synthetic Lethality	FSW = 0.2844	Unknown	TRANSCRIPTION REGULATOR/ ZINC ION BINDING
AT3G51880	Predicted Affinity Capture-MS	FSW = 0.0276	Unknown	HMGB1 (HIGH MOBILITY GROUP B 1) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT4G04695	Predicted Synthetic Lethality	FSW = 0.1525	Unknown	CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G10130	Predicted Phenotypic Enhancement	FSW = 0.0504	Unknown	DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT4G25950	Predicted Phenotypic Enhancement	FSW = 0.1323	Unknown	VATG3 (VACUOLAR ATP SYNTHASE G3) HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT4G27130	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.4117	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT4G29580	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.3349	Unknown	CYTIDINE DEAMINASE PUTATIVE / CYTIDINE AMINOHYDROLASE PUTATIVE
AT5G01770	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.3085	Unknown	RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING
AT5G16170	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.2319	Unknown	UNKNOWN PROTEIN
AT5G16980	Predicted Colocalization two hybrid two hybrid Affinity Capture-Western Affinity Capture-Western two hybrid two hybrid Affinity Capture-Western Affinity Capture-Western two hybrid Colocalization co-fractionation Co-fractionation Synthetic Rescue Synthetic Lethality Affinity Capture-MS Reconstituted Complex Co-purification Phenotypic Suppression	FSW = 0.5670	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G20340	Predicted synthetic growth defect Phenotypic Enhancement Synthetic Lethality	FSW = 0.2099	Unknown	BG5 (BETA-13-GLUCANASE 5) GLUCAN 13-BETA-GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G45620	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.3931	Unknown	26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9)
AT5G49560	Predicted Phenotypic Enhancement	FSW = 0.0163	Unknown	UNKNOWN PROTEIN
AT5G53300	Predicted Phenotypic Suppression	FSW = 0.0250	Unknown	UBC10 (UBIQUITIN-CONJUGATING ENZYME 10) UBIQUITIN-PROTEIN LIGASE
AT4G22140	Predicted synthetic growth defect	FSW = 0.0755	Unknown	DNA BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G23730	Predicted Synthetic Lethality	FSW = 0.0086	Unknown	ALDOSE 1-EPIMERASE FAMILY PROTEIN
AT4G26510	Predicted Affinity Capture-MS	FSW = 0.0610	Unknown	ATP BINDING / KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / URACIL PHOSPHORIBOSYLTRANSFERASE
AT4G33070	Predicted Affinity Capture-MS	FSW = 0.0180	Unknown	PYRUVATE DECARBOXYLASE PUTATIVE
AT4G36050	Predicted Phenotypic Enhancement	FSW = 0.1686	Unknown	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN
AT4G37680	Predicted Affinity Capture-MS	FSW = 0.0492	Unknown	HHP4 (HEPTAHELICAL PROTEIN 4) RECEPTOR
AT5G01640	Predicted Affinity Capture-MS	FSW = 0.0760	Unknown	PRA1B5 (PRENYLATED RAB ACCEPTOR 1B5)
AT5G06420	Predicted Affinity Capture-MS	FSW = 0.0097	Unknown	ZINC FINGER (CCCH-TYPE/C3HC4-TYPE RING FINGER) FAMILY PROTEIN
AT5G11500	Predicted Phenotypic Enhancement	FSW = 0.1460	Unknown	UNKNOWN PROTEIN
AT5G17860	Predicted Phenotypic Suppression	FSW = 0.3314	Unknown	CAX7 (CALCIUM EXCHANGER 7) CALCIUMSODIUM ANTIPORTER/ CATIONCATION ANTIPORTER
AT5G44830	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1790	Unknown	GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN
AT5G47080	Predicted Synthetic Lethality	FSW = 0.0460	Unknown	CKB1 PROTEIN KINASE REGULATOR
AT5G49970	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2210	Unknown	ATPPOX (A THALIANA PYRIDOXIN (PYRODOXAMINE) 5-PHOSPHATE OXIDASE) PYRIDOXAMINE-PHOSPHATE OXIDASE
AT5G54960	Predicted Affinity Capture-MS	FSW = 0.0397	Unknown	PDC2 (PYRUVATE DECARBOXYLASE-2) CARBOXY-LYASE/ CATALYTIC/ MAGNESIUM ION BINDING / PYRUVATE DECARBOXYLASE/ THIAMIN PYROPHOSPHATE BINDING

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Proteins

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT4G21490 - ( NDB3 NADH dehydrogenase )

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