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AT5G45620 - ( 26S proteasome regulatory subunit putative (RPN9) )

139 Proteins interacs with AT5G45620

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT2G25490	Experimental biochemical	FSW = 0.0922	Unknown	EBF1 (EIN3-BINDING F BOX PROTEIN 1) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT4G01100	Predicted Affinity Capture-MS	FSW = 0.0065	Unknown	ADNT1 (ADENINE NUCLEOTIDE TRANSPORTER 1) ADP TRANSMEMBRANE TRANSPORTER/ AMP TRANSMEMBRANE TRANSPORTER/ ATP TRANSMEMBRANE TRANSPORTER/ BINDING
AT2G17360	Predicted Phenotypic Enhancement Phenotypic Enhancement Synthetic Rescue synthetic growth defect	FSW = 0.0905	Unknown	40S RIBOSOMAL PROTEIN S4 (RPS4A)
AT3G47520	Predicted Synthetic Lethality	FSW = 0.0412	Unknown	MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT5G09590	Predicted Phenotypic Enhancement	FSW = 0.1502	Unknown	MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT4G16660	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2793	Unknown	HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE
AT1G20260	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.2281	Unknown	HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT3G28715	Predicted synthetic growth defect	FSW = 0.0566	Unknown	H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT2G27020	Predicted Affinity Capture-MS	FSW = 0.0333	Unknown	PAG1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT3G57990	Predicted Synthetic Lethality	FSW = 0.0247	Unknown	UNKNOWN PROTEIN
AT5G35590	Predicted Affinity Capture-MS	FSW = 0.0453	Unknown	PAA1 (PROTEASOME ALPHA SUBUNIT A 1) ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT4G37870	Predicted Affinity Capture-MS	FSW = 0.0097	Unknown	PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1) ATP BINDING / PHOSPHOENOLPYRUVATE CARBOXYKINASE (ATP)/ PHOSPHOENOLPYRUVATE CARBOXYKINASE/ PURINE NUCLEOTIDE BINDING
AT4G29210	Predicted synthetic growth defect	FSW = 0.0902	Unknown	GGT4 (GAMMA-GLUTAMYL TRANSPEPTIDASE 4) GAMMA-GLUTAMYLTRANSFERASE/ GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE
AT1G74560	Predicted Synthetic Lethality	FSW = 0.1364	Unknown	NRP1 (NAP1-RELATED PROTEIN 1) DNA BINDING / CHROMATIN BINDING / HISTONE BINDING
AT5G09660	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.3321	Unknown	PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2) MALATE DEHYDROGENASE
AT5G65430	Predicted Phenotypic Enhancement	FSW = 0.0865	Unknown	GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT3G58610	Predicted Phenotypic Enhancement	FSW = 0.1660	Unknown	KETOL-ACID REDUCTOISOMERASE
AT1G64190	Predicted Phenotypic Enhancement Affinity Capture-Western Phenotypic Enhancement	FSW = 0.1527	Unknown	6-PHOSPHOGLUCONATE DEHYDROGENASE FAMILY PROTEIN
AT1G56050	Predicted Phenotypic Suppression	FSW = 0.1639	Unknown	GTP-BINDING PROTEIN-RELATED
AT5G15450	Predicted Synthetic Lethality	FSW = 0.1966	Unknown	CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT1G48860	Predicted Phenotypic Enhancement	FSW = 0.2258	Unknown	3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE PUTATIVE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PUTATIVE / EPSP SYNTHASE PUTATIVE
AT5G60540	Predicted Synthetic Lethality Phenotypic Enhancement Synthetic Lethality	FSW = 0.2929	Unknown	PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT1G02780	Predicted Affinity Capture-MS	FSW = 0.0111	Unknown	EMB2386 (EMBRYO DEFECTIVE 2386) STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G01630	Predicted Phenotypic Suppression	FSW = 0.0392	Unknown	GLYCOSYL HYDROLASE FAMILY 17 PROTEIN / BETA-13-GLUCANASE PUTATIVE
AT5G08570	Predicted Phenotypic Suppression	FSW = 0.0310	Unknown	PYRUVATE KINASE PUTATIVE
AT4G04340	Predicted Phenotypic Suppression	FSW = 0.1172	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT1G75990	Predicted Affinity Capture-MS	FSW = 0.0951	Unknown	26S PROTEASOME REGULATORY SUBUNIT S3 PUTATIVE (RPN3)
AT1G04750	Predicted Synthetic Lethality Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.3876	Unknown	VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)
AT2G32670	Predicted Phenotypic Enhancement	FSW = 0.1943	Unknown	ATVAMP725
AT5G42790	Predicted Affinity Capture-MS	FSW = 0.1083	Unknown	PAF1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT4G24820	Predicted Affinity Capture-MS	FSW = 0.1297	Unknown	26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN7)
AT4G18800	Predicted synthetic growth defect	FSW = 0.1979	Unknown	ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D) GTP BINDING
AT3G05530	Predicted Affinity Capture-MS	FSW = 0.1262	Unknown	RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A) ATPASE/ CALMODULIN BINDING
AT2G44680	Predicted synthetic growth defect	FSW = 0.0287	Unknown	CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE
AT1G21700	Predicted Phenotypic Enhancement synthetic growth defect synthetic growth defect Phenotypic Enhancement Phenotypic Enhancement Synthetic Lethality	FSW = 0.1820	Unknown	ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C) DNA BINDING
AT3G13445	Predicted Phenotypic Enhancement	FSW = 0.1033	Unknown	TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT1G72560	Predicted interologs mapping Affinity Capture-Western	FSW = 0.0532	Unknown	PSD (PAUSED) NUCLEOBASE NUCLEOSIDE NUCLEOTIDE AND NUCLEIC ACID TRANSMEMBRANE TRANSPORTER/ TRNA BINDING
AT4G25340	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2541	Unknown	IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT5G47630	Predicted Synthetic Lethality	FSW = 0.1203	Unknown	MTACP3 (MITOCHONDRIAL ACYL CARRIER PROTEIN 3) ACYL CARRIER/ COFACTOR BINDING
AT4G00600	Predicted Affinity Capture-MS	FSW = 0.0161	Unknown	TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE PUTATIVE
AT2G30160	Predicted synthetic growth defect	FSW = 0.2567	Unknown	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT1G64880	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.1169	Unknown	RIBOSOMAL PROTEIN S5 FAMILY PROTEIN
AT5G24090	Predicted Synthetic Lethality	FSW = 0.1965	Unknown	ACIDIC ENDOCHITINASE (CHIB1)
AT3G54840	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2487	Unknown	ARA6 GTP BINDING / GTPASE
AT2G47990	Predicted synthetic growth defect	FSW = 0.0460	Unknown	SWA1 (SLOW WALKER1) NUCLEOTIDE BINDING
AT2G05170	Predicted Synthetic Lethality	FSW = 0.0936	Unknown	ATVPS11 BINDING / PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING
AT4G39200	Predicted synthetic growth defect Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.2785	Unknown	40S RIBOSOMAL PROTEIN S25 (RPS25E)
AT4G27070	Predicted Affinity Capture-MS Affinity Capture-MS Co-purification Affinity Capture-Western Reconstituted Complex	FSW = 0.0912	Unknown	TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2) TRYPTOPHAN SYNTHASE
AT3G13900	Predicted Affinity Capture-MS	FSW = 0.0988	Unknown	ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM
AT4G16420	Predicted Phenotypic Enhancement	FSW = 0.1277	Unknown	ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR
AT5G58290	Predicted Affinity Capture-MS	FSW = 0.0977	Unknown	RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3) ATPASE
AT4G17190	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1936	Unknown	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT5G23540	Predicted two hybrid Affinity Capture-MS Co-expression	FSW = 0.0956	Unknown	26S PROTEASOME REGULATORY SUBUNIT PUTATIVE
AT3G12280	Predicted Phenotypic Enhancement	FSW = 0.0090	Unknown	RBR1 (RETINOBLASTOMA-RELATED 1) TRANSCRIPTION FACTOR BINDING
AT5G05780	Predicted two hybrid Affinity Capture-MS	FSW = 0.0910	Unknown	RPN8A (RP NON-ATPASE SUBUNIT 8A)
AT5G09900	Predicted two hybrid two hybrid Affinity Capture-MS Co-expression	FSW = 0.0887	Unknown	EMB2107 (EMBRYO DEFECTIVE 2107)
AT1G29150	Predicted Affinity Capture-MS	FSW = 0.0726	Unknown	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)
AT1G53780	Predicted Affinity Capture-MS	FSW = 0.0890	Unknown	ATP BINDING / ATPASE/ HYDROLASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT2G32730	Predicted Affinity Capture-MS	FSW = 0.0867	Unknown	26S PROTEASOME REGULATORY SUBUNIT PUTATIVE
AT4G28470	Predicted Affinity Capture-MS	FSW = 0.0541	Unknown	RPN1B (26S PROTEASOME REGULATORY SUBUNIT S2 1B) BINDING / ENZYME REGULATOR
AT4G29040	Predicted Affinity Capture-MS	FSW = 0.1442	Unknown	RPT2A (REGULATORY PARTICLE AAA-ATPASE 2A) ATPASE
AT5G20000	Predicted Affinity Capture-MS	FSW = 0.0544	Unknown	26S PROTEASOME AAA-ATPASE SUBUNIT PUTATIVE
AT5G42040	Predicted Affinity Capture-MS	FSW = 0.0444	Unknown	RPN12B (REGULATORY PARTICLE NON-ATPASE 12B) PEPTIDASE
AT5G43010	Predicted Affinity Capture-MS	FSW = 0.1133	Unknown	RPT4A ATPASE
AT1G07820	Predicted Affinity Capture-Western synthetic growth defect	FSW = 0.1056	Unknown	HISTONE H4
AT1G13580	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.1892	Unknown	LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)
AT1G15440	Predicted Synthetic Lethality	FSW = 0.0357	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G20693	Predicted synthetic growth defect	FSW = 0.3435	Unknown	HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G21370	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.2880	Unknown	UNKNOWN PROTEIN
AT1G25500	Predicted Synthetic Lethality	FSW = 0.0379	Unknown	CHOLINE TRANSPORTER-RELATED
AT1G26690	Predicted Phenotypic Enhancement Affinity Capture-MS Synthetic Rescue Phenotypic Enhancement Affinity Capture-Western Reconstituted Complex two hybrid Affinity Capture-MS	FSW = 0.2455	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT1G34580	Predicted Affinity Capture-MS	FSW = 0.0776	Unknown	MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G35350	Predicted synthetic growth defect	FSW = 0.3982	Unknown	LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK)
AT1G47830	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.3117	Unknown	CLATHRIN COAT ASSEMBLY PROTEIN PUTATIVE
AT1G55300	Predicted synthetic growth defect	FSW = 0.2611	Unknown	TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G60680	Predicted synthetic growth defect	FSW = 0.1048	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G66590	Predicted Phenotypic Enhancement synthetic growth defect	FSW = 0.2624	Unknown	COX19 FAMILY PROTEIN
AT1G68530	Predicted interologs mapping Affinity Capture-Western	FSW = 0.1083	Unknown	KCS6 (3-KETOACYL-COA SYNTHASE 6) CATALYTIC/ TRANSFERASE TRANSFERRING ACYL GROUPS OTHER THAN AMINO-ACYL GROUPS
AT1G78770	Predicted synthetic growth defect	FSW = 0.2952	Unknown	CELL DIVISION CYCLE FAMILY PROTEIN
AT2G03040	Predicted Synthetic Lethality	FSW = 0.0173	Unknown	TRANSMEMBRANE PROTEIN-RELATED
AT2G03250	Predicted synthetic growth defect	FSW = 0.1712	Unknown	EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN
AT2G19220	Predicted Affinity Capture-Western	FSW = 0.0916	Unknown	UNKNOWN PROTEIN
AT2G24960	Predicted Synthetic Lethality Phenotypic Suppression	FSW = 0.1938	Unknown	UNKNOWN PROTEIN
AT2G25280	Predicted Synthetic Lethality	FSW = 0.0865	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S MEDIATOR OF ERBB2-DRIVEN CELL MOTILITY (MEMO) RELATED (INTERPROIPR002737) HAS 742 BLAST HITS TO 742 PROTEINS IN 323 SPECIES ARCHAE - 138 BACTERIA - 240 METAZOA - 132 FUNGI - 82 PLANTS - 26 VIRUSES - 0 OTHER EUKARYOTES - 124 (SOURCE NCBI BLINK)
AT2G30800	Predicted Synthetic Lethality	FSW = 0.1061	Unknown	HVT1 (HELICASE IN VASCULAR TISSUE AND TAPETUM) ATP BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G37420	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.2843	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT2G38490	Predicted Synthetic Lethality	FSW = 0.0775	Unknown	CIPK22 (CBL-INTERACTING PROTEIN KINASE 22) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G01100	Predicted Affinity Capture-Western	FSW = 0.1828	Unknown	HYP1 (HYPOTHETICAL PROTEIN 1)
AT3G02000	Predicted Phenotypic Enhancement	FSW = 0.1329	Unknown	ROXY1 DISULFIDE OXIDOREDUCTASE
AT3G02320	Predicted Affinity Capture-MS	FSW = 0.1083	Unknown	RNA BINDING / TRNA (GUANINE-N2-)-METHYLTRANSFERASE
AT3G03080	Predicted synthetic growth defect	FSW = 0.1161	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT3G11230	Predicted Phenotypic Enhancement	FSW = 0.2252	Unknown	YIPPEE FAMILY PROTEIN
AT3G12200	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Synthetic Lethality Affinity Capture-MS Co-purification Phenotypic Enhancement Reconstituted Complex	FSW = 0.1888	Unknown	ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G18660	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1642	Unknown	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT3G21460	Predicted Synthetic Lethality	FSW = 0.1762	Unknown	ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE
AT3G22290	Predicted synthetic growth defect	FSW = 0.4499	Unknown	UNKNOWN PROTEIN
AT3G24010	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.2747	Unknown	ING1 (INHIBITOR OF GROWTH 1) DNA BINDING / METHYLATED HISTONE RESIDUE BINDING
AT3G25900	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2484	Unknown	HMT-1 HOMOCYSTEINE S-METHYLTRANSFERASE
AT3G27110	Predicted Affinity Capture-MS	FSW = 0.0412	Unknown	PEPTIDASE M48 FAMILY PROTEIN
AT3G27440	Predicted Synthetic Lethality	FSW = 0.1475	Unknown	URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE
AT3G47290	Predicted Phenotypic Enhancement synthetic growth defect Phenotypic Enhancement Phenotypic Enhancement Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1566	Unknown	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
AT3G53030	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.2634	Unknown	SRPK4 (SER/ARG-RICH PROTEIN KINASE 4) KINASE/ PROTEIN KINASE
AT4G00800	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1771	Unknown	BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G04700	Predicted interologs mapping Affinity Capture-Western	FSW = 0.0688	Unknown	CPK27 ATP BINDING / CALCIUM ION BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G10360	Predicted Phenotypic Enhancement	FSW = 0.0376	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRAM LAG1 AND CLN8 HOMOLOGY (INTERPROIPR006634) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G313002) HAS 453 BLAST HITS TO 451 PROTEINS IN 101 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 225 FUNGI - 97 PLANTS - 91 VIRUSES - 3 OTHER EUKARYOTES - 37 (SOURCE NCBI BLINK)
AT4G21490	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.3931	Unknown	NDB3 NADH DEHYDROGENASE
AT4G21800	Predicted Reconstituted Complex	FSW = 0.0231	Unknown	QQT2 (QUATRE-QUART2) ATP BINDING / NUCLEOTIDE BINDING
AT4G22140	Predicted Synthetic Lethality	FSW = 0.0729	Unknown	DNA BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G27130	Predicted synthetic growth defect Phenotypic Suppression	FSW = 0.4119	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT4G29580	Predicted synthetic growth defect	FSW = 0.1672	Unknown	CYTIDINE DEAMINASE PUTATIVE / CYTIDINE AMINOHYDROLASE PUTATIVE
AT4G36050	Predicted Phenotypic Enhancement	FSW = 0.1961	Unknown	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN
AT5G01430	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1632	Unknown	GOT1-LIKE FAMILY PROTEIN
AT5G01770	Predicted Phenotypic Enhancement synthetic growth defect	FSW = 0.3477	Unknown	RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING
AT5G04800	Predicted interologs mapping	FSW = 0.2209	Unknown	40S RIBOSOMAL PROTEIN S17 (RPS17D)
AT5G06600	Predicted Affinity Capture-MS	FSW = 0.0866	Unknown	UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12) UBIQUITIN THIOLESTERASE/ UBIQUITIN-SPECIFIC PROTEASE
AT5G13480	Predicted interologs mapping	FSW = 0.0205	Unknown	FY PROTEIN BINDING
AT5G14060	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.2637	Unknown	CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE
AT5G14180	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1518	Unknown	MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1) CATALYTIC
AT5G15240	Predicted Phenotypic Enhancement	FSW = 0.0998	Unknown	AMINO ACID TRANSPORTER FAMILY PROTEIN
AT5G16170	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.2712	Unknown	UNKNOWN PROTEIN
AT5G16980	Predicted synthetic growth defect	FSW = 0.4384	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G17860	Predicted Synthetic Rescue Phenotypic Enhancement	FSW = 0.2923	Unknown	CAX7 (CALCIUM EXCHANGER 7) CALCIUMSODIUM ANTIPORTER/ CATIONCATION ANTIPORTER
AT5G20340	Predicted synthetic growth defect synthetic growth defect Phenotypic Enhancement synthetic growth defect Phenotypic Enhancement Phenotypic Enhancement synthetic growth defect synthetic growth defect Synthetic Lethality Phenotypic Enhancement Synthetic Rescue	FSW = 0.2201	Unknown	BG5 (BETA-13-GLUCANASE 5) GLUCAN 13-BETA-GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G44830	Predicted Phenotypic Enhancement	FSW = 0.2179	Unknown	GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN
AT1G10090	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.1729	Unknown	UNKNOWN PROTEIN
AT1G10210	Predicted Phenotypic Enhancement	FSW = 0.0806	Unknown	ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE
AT1G11510	Predicted synthetic growth defect	FSW = 0.2507	Unknown	DNA-BINDING STOREKEEPER PROTEIN-RELATED
AT1G26320	Predicted Synthetic Lethality	FSW = 0.2090	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT1G74810	Predicted Synthetic Lethality	FSW = 0.0968	Unknown	BOR5 ANION EXCHANGER
AT1G75290	Predicted Phenotypic Enhancement	FSW = 0.0524	Unknown	OXIDOREDUCTASE ACTING ON NADH OR NADPH
AT2G03130	Predicted Phenotypic Enhancement	FSW = 0.2947	Unknown	RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G23820	Predicted Phenotypic Enhancement	FSW = 0.0998	Unknown	METAL-DEPENDENT PHOSPHOHYDROLASE HD DOMAIN-CONTAINING PROTEIN
AT3G47610	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.1493	Unknown	TRANSCRIPTION REGULATOR/ ZINC ION BINDING
AT5G42720	Predicted Phenotypic Enhancement	FSW = 0.1429	Unknown	GLYCOSYL HYDROLASE FAMILY 17 PROTEIN
AT5G47080	Predicted Affinity Capture-Western	FSW = 0.0562	Unknown	CKB1 PROTEIN KINASE REGULATOR
AT5G49930	Predicted synthetic growth defect	FSW = 0.0604	Unknown	EMB1441 (EMBRYO DEFECTIVE 1441) NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G49970	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.2751	Unknown	ATPPOX (A THALIANA PYRIDOXIN (PYRODOXAMINE) 5-PHOSPHATE OXIDASE) PYRIDOXAMINE-PHOSPHATE OXIDASE
AT3G11270	Predicted two hybrid Co-expression	FSW = 0.0785	Unknown	MEE34 (MATERNAL EFFECT EMBRYO ARREST 34)
AT4G19006	Predicted Gene fusion method Phylogenetic profile method	FSW = 0.1244	Unknown	26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9)

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Fasta sequences:

Proteins

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT5G45620 - ( 26S proteasome regulatory subunit putative (RPN9) )

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