Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G78770 - ( cell division cycle family protein )

177 Proteins interacs with AT1G78770
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT5G09590

Predicted

Phenotypic Enhancement

synthetic growth defect

FSW = 0.1439

Unknown

MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT4G16660

Predicted

synthetic growth defect

FSW = 0.2057

Unknown

HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE
AT3G28715

Predicted

synthetic growth defect

FSW = 0.0512

Unknown

H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT5G10350

Predicted

Affinity Capture-Western

FSW = 0.0892

Unknown

POLYADENYLATE-BINDING PROTEIN FAMILY PROTEIN / PABP FAMILY PROTEIN
AT1G07510

Predicted

Synthetic Lethality

FSW = 0.0034

Unknown

FTSH10 (FTSH PROTEASE 10) ATP BINDING / ATPASE/ METALLOENDOPEPTIDASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / ZINC ION BINDING
AT5G13450

Predicted

Synthetic Lethality

FSW = 0.0492

Unknown

ATP SYNTHASE DELTA CHAIN MITOCHONDRIAL PUTATIVE / H(+)-TRANSPORTING TWO-SECTOR ATPASE DELTA (OSCP) SUBUNIT PUTATIVE
AT4G29210

Predicted

synthetic growth defect

FSW = 0.0722

Unknown

GGT4 (GAMMA-GLUTAMYL TRANSPEPTIDASE 4) GAMMA-GLUTAMYLTRANSFERASE/ GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE
AT5G58060

Predicted

Synthetic Lethality

FSW = 0.0046

Unknown

YKT61
AT1G74560

Predicted

Synthetic Lethality

FSW = 0.1342

Unknown

NRP1 (NAP1-RELATED PROTEIN 1) DNA BINDING / CHROMATIN BINDING / HISTONE BINDING
AT3G22890

Predicted

synthetic growth defect

FSW = 0.2140

Unknown

APS1 (ATP SULFURYLASE 1) SULFATE ADENYLYLTRANSFERASE (ATP)
AT5G09660

Predicted

synthetic growth defect

FSW = 0.1845

Unknown

PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2) MALATE DEHYDROGENASE
AT3G45770

Predicted

synthetic growth defect

FSW = 0.0196

Unknown

OXIDOREDUCTASE ZINC-BINDING DEHYDROGENASE FAMILY PROTEIN
AT5G65430

Predicted

Phenotypic Enhancement

FSW = 0.0650

Unknown

GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G55920

Predicted

synthetic growth defect

Phenotypic Enhancement

FSW = 0.0691

Unknown

ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE
AT1G49630

Predicted

synthetic growth defect

FSW = 0.0133

Unknown

ATPREP2 (ARABIDOPSIS THALIANA PRESEQUENCE PROTEASE 2) CATALYTIC/ METAL ION BINDING / METALLOENDOPEPTIDASE/ METALLOPEPTIDASE/ ZINC ION BINDING
AT3G55400

Predicted

Phenotypic Enhancement

FSW = 0.0898

Unknown

OVA1 (OVULE ABORTION 1) ATP BINDING / AMINOACYL-TRNA LIGASE/ METHIONINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT1G48860

Predicted

Synthetic Lethality

FSW = 0.1859

Unknown

3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE PUTATIVE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PUTATIVE / EPSP SYNTHASE PUTATIVE
AT1G10070

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

FSW = 0.0576

Unknown

ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) BRANCHED-CHAIN-AMINO-ACID TRANSAMINASE/ CATALYTIC
AT2G42590

Predicted

interologs mapping

FSW = 0.0245

Unknown

GRF9 (GENERAL REGULATORY FACTOR 9) CALCIUM ION BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G45145

Predicted

Synthetic Rescue

FSW = 0.0681

Unknown

ATTRX5 OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR
AT5G60540

Predicted

Synthetic Lethality

FSW = 0.2341

Unknown

PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT3G48750

Predicted

Synthetic Lethality

biochemical

FSW = 0.0333

Unknown

CDC2 (CELL DIVISION CONTROL 2) CYCLIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING / PROTEIN KINASE
AT4G32360

Predicted

synthetic growth defect

FSW = 0.0461

Unknown

NADP ADRENODOXIN-LIKE FERREDOXIN REDUCTASE
AT1G75170

Predicted

Co-purification

FSW = 0.0483

Unknown

SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT4G23700

Predicted

synthetic growth defect

FSW = 0.0153

Unknown

ATCHX17 (CATION/H+ EXCHANGER 17) MONOVALENT CATIONPROTON ANTIPORTER/ SODIUMHYDROGEN ANTIPORTER
AT5G47700

Predicted

synthetic growth defect

FSW = 0.0299

Unknown

60S ACIDIC RIBOSOMAL PROTEIN P1 (RPP1C)
AT1G04750

Predicted

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

FSW = 0.2675

Unknown

VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)
AT1G70730

Predicted

synthetic growth defect

FSW = 0.0261

Unknown

PHOSPHOGLUCOMUTASE CYTOPLASMIC PUTATIVE / GLUCOSE PHOSPHOMUTASE PUTATIVE
AT5G12480

Predicted

Synthetic Lethality

FSW = 0.0054

Unknown

CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT1G53750

Predicted

Affinity Capture-Western

FSW = 0.0173

Unknown

RPT1A (REGULATORY PARTICLE TRIPLE-A 1A) ATPASE
AT3G49370

Predicted

Phenotypic Enhancement

FSW = 0.0424

Unknown

CALCIUM-DEPENDENT PROTEIN KINASE PUTATIVE / CDPK PUTATIVE
AT4G14350

Predicted

Phenotypic Enhancement

Synthetic Rescue

synthetic growth defect

FSW = 0.0787

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT4G33090

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0886

Unknown

APM1 (AMINOPEPTIDASE M1) AMINOPEPTIDASE
AT2G27530

Predicted

synthetic growth defect

FSW = 0.0126

Unknown

PGY1 (PIGGYBACK1) RNA BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G18800

Predicted

Synthetic Rescue

synthetic growth defect

FSW = 0.1769

Unknown

ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D) GTP BINDING
AT3G20060

Predicted

interologs mapping

FSW = 0.0195

Unknown

UBC19 (UBIQUITIN-CONJUGATING ENZYME19) UBIQUITIN-PROTEIN LIGASE
AT3G60180

Predicted

Synthetic Lethality

FSW = 0.0910

Unknown

URIDYLATE KINASE PUTATIVE / URIDINE MONOPHOSPHATE KINASE PUTATIVE / UMP KINASE PUTATIVE
AT2G44680

Predicted

synthetic growth defect

FSW = 0.0195

Unknown

CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE
AT3G13445

Predicted

Phenotypic Enhancement

FSW = 0.0969

Unknown

TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT3G52250

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.1295

Unknown

DNA BINDING / TRANSCRIPTION FACTOR
AT1G76300

Predicted

synthetic growth defect

FSW = 0.0748

Unknown

SMD3 (SNRNP CORE PROTEIN SMD3)
AT3G14120

Predicted

synthetic growth defect

FSW = 0.0060

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN TRANSPORT LOCATED IN NUCLEAR PORE EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NUCLEAR PORE PROTEIN 84/107 (INTERPROIPR007252) HAS 207 BLAST HITS TO 206 PROTEINS IN 78 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 123 FUNGI - 57 PLANTS - 22 VIRUSES - 0 OTHER EUKARYOTES - 5 (SOURCE NCBI BLINK)
AT2G40290

Predicted

Affinity Capture-Western

FSW = 0.0441

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 PUTATIVE / EIF-2A PUTATIVE / EIF-2-ALPHA PUTATIVE
AT5G25150

Predicted

interologs mapping

FSW = 0.0158

Unknown

TAF5 (TBP-ASSOCIATED FACTOR 5) NUCLEOTIDE BINDING / TRANSCRIPTION REGULATOR
AT2G30160

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

FSW = 0.2047

Unknown

MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT3G18480

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.1395

Unknown

ATCASP (ARABIDOPSIS THALIANA CCAAT-DISPLACEMENT PROTEIN ALTERNATIVELY SPLICED PRODUCT)
AT5G66590

Predicted

Synthetic Lethality

FSW = 0.0293

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT3G54840

Predicted

synthetic growth defect

FSW = 0.1705

Unknown

ARA6 GTP BINDING / GTPASE
AT5G05490

Predicted

synthetic growth defect

FSW = 0.0060

Unknown

SYN1 (SYNAPTIC 1)
AT4G39200

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

FSW = 0.1906

Unknown

40S RIBOSOMAL PROTEIN S25 (RPS25E)
AT1G16190

Predicted

Affinity Capture-Western

FSW = 0.0102

Unknown

DNA REPAIR PROTEIN RAD23 PUTATIVE
AT5G10330Predicted

Synthetic Lethality

FSW = 0.0446

Unknown

HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1) HISTIDINOL-PHOSPHATE TRANSAMINASE
AT1G62800

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1948

Unknown

ASP4 (ASPARTATE AMINOTRANSFERASE 4) CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING / TRANSAMINASE/ TRANSFERASE TRANSFERRING NITROGENOUS GROUPS
AT3G25980

Predicted

Synthetic Rescue

in vivo

in vitro

Affinity Capture-Western

Co-expression

FSW = 0.0293

Unknown

MITOTIC SPINDLE CHECKPOINT PROTEIN PUTATIVE (MAD2)
AT1G77990

Predicted

biochemical

FSW = 0.0400

Unknown

AST56 SULFATE TRANSMEMBRANE TRANSPORTER
AT5G40820

Predicted

Phenotypic Enhancement

FSW = 0.0112

Unknown

ATRAD3 BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / PROTEIN SERINE/THREONINE KINASE
AT4G16420

Predicted

Synthetic Lethality

FSW = 0.1102

Unknown

ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR
AT5G63960

Predicted

Affinity Capture-Western

Co-expression

FSW = 0.0067

Unknown

EMB2780 (EMBRYO DEFECTIVE 2780) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT2G29540

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0946

Unknown

ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT2G42810

Predicted

two hybrid

in vitro

FSW = 0.0153

Unknown

PP52 (PROTEIN PHOSPHATASE 52) PHOSPHOPROTEIN PHOSPHATASE/ PROTEIN BINDING / PROTEIN SERINE/THREONINE PHOSPHATASE
AT1G05180

Predicted

Phenotypic Enhancement

synthetic growth defect

FSW = 0.0922

Unknown

AXR1 (AUXIN RESISTANT 1) SMALL PROTEIN ACTIVATING ENZYME
AT1G12400

Predicted

two hybrid

FSW = 0.0063

Unknown

DNA BINDING
AT1G06590

Predicted

in vivo

Co-expression

FSW = 0.1045

Unknown

UNKNOWN PROTEIN
AT2G20635Predicted

in vivo

FSW = 0.0148

Unknown

ATP BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT3G16320

Predicted

two hybrid

in vitro

Affinity Capture-Western

FSW = 0.1260

Unknown

CDC27A BINDING
AT4G21530Predicted

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

co-fractionation

Co-fractionation

FSW = 0.1083

Unknown

NUCLEOTIDE BINDING
AT5G27080

Predicted

in vitro

in vivo

in vivo

in vitro

Reconstituted Complex

FSW = 0.0578

Unknown

WD-40 REPEAT FAMILY PROTEIN
AT1G04220

Predicted

Synthetic Lethality

FSW = 0.0127

Unknown

KCS2 (3-KETOACYL-COA SYNTHASE 2) FATTY ACID ELONGASE
AT1G09810

Predicted

Phenotypic Enhancement

Synthetic Rescue

FSW = 0.0482

Unknown

ECT11 (EVOLUTIONARILY CONSERVED C-TERMINAL REGION 11)
AT1G12390

Predicted

synthetic growth defect

FSW = 0.0373

Unknown

CORNICHON FAMILY PROTEIN
AT1G13580

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.1698

Unknown

LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)
AT1G15240

Predicted

Synthetic Lethality

FSW = 0.0365

Unknown

PHOX (PX) DOMAIN-CONTAINING PROTEIN
AT1G15440

Predicted

synthetic growth defect

FSW = 0.0557

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G17720

Predicted

Synthetic Rescue

FSW = 0.0039

Unknown

ATB BETA NUCLEOTIDE BINDING / PROTEIN PHOSPHATASE TYPE 2A REGULATOR
AT1G20693

Predicted

Affinity Capture-MS

Affinity Capture-MS

Colocalization

Phenotypic Suppression

FSW = 0.3929

Unknown

HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G23280

Predicted

Synthetic Rescue

FSW = 0.0081

Unknown

MAK16 PROTEIN-RELATED
AT1G23460

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1539

Unknown

POLYGALACTURONASE
AT1G25155Predicted

synthetic growth defect

FSW = 0.2724

Unknown

ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT1G25260

Predicted

Synthetic Lethality

FSW = 0.0319

Unknown

ACIDIC RIBOSOMAL PROTEIN P0-RELATED
AT1G25500

Predicted

Synthetic Lethality

FSW = 0.0301

Unknown

CHOLINE TRANSPORTER-RELATED
AT1G27080

Predicted

synthetic growth defect

FSW = 0.0495

Unknown

NRT16 (NITRATE TRANSPORTER 16) LOW AFFINITY NITRATE TRANSMEMBRANE TRANSPORTER/ TRANSPORTER
AT1G33040

Predicted

synthetic growth defect

FSW = 0.0189

Unknown

NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5)
AT1G34580

Predicted

synthetic growth defect

FSW = 0.0910

Unknown

MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G35350

Predicted

synthetic growth defect

FSW = 0.2642

Unknown

LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK)
AT1G47830

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

synthetic growth defect

FSW = 0.2284

Unknown

CLATHRIN COAT ASSEMBLY PROTEIN PUTATIVE
AT1G52500

Predicted

Phenotypic Suppression

FSW = 0.1179

Unknown

ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G55300

Predicted

synthetic growth defect

FSW = 0.1891

Unknown

TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G60680

Predicted

synthetic growth defect

FSW = 0.1053

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G66520

Predicted

Phenotypic Suppression

FSW = 0.0176

Unknown

PDE194 (PIGMENT DEFECTIVE 194) CATALYTIC/ FORMYLTETRAHYDROFOLATE DEFORMYLASE/ HYDROXYMETHYL- FORMYL- AND RELATED TRANSFERASE
AT1G66590

Predicted

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

Synthetic Rescue

synthetic growth defect

FSW = 0.2251

Unknown

COX19 FAMILY PROTEIN
AT1G68200

Predicted

Affinity Capture-MS

FSW = 0.0121

Unknown

ZINC FINGER (CCCH-TYPE) FAMILY PROTEIN
AT1G68310

Predicted

synthetic growth defect

FSW = 0.0107

Unknown

VACUOLAR SORTING SIGNAL BINDING
AT1G77720

Predicted

interologs mapping

Co-expression

FSW = 0.0246

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT1G11510

Predicted

Synthetic Lethality

FSW = 0.1437

Unknown

DNA-BINDING STOREKEEPER PROTEIN-RELATED
AT1G13950

Predicted

synthetic growth defect

FSW = 0.0327

Unknown

ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1) TRANSLATION INITIATION FACTOR
AT1G26320

Predicted

Synthetic Lethality

FSW = 0.1342

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT1G44180

Predicted

synthetic growth defect

FSW = 0.1023

Unknown

AMINOACYLASE PUTATIVE / N-ACYL-L-AMINO-ACID AMIDOHYDROLASE PUTATIVE
AT2G04660

Predicted

interaction prediction

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

interologs mapping

Co-expression

FSW = 0.0895

Unknown

APC2 UBIQUITIN PROTEIN LIGASE BINDING / UBIQUITIN-PROTEIN LIGASE
AT2G18290

Predicted

interaction prediction

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0645

Unknown

ANAPHASE-PROMOTING COMPLEX SUBUNIT 10 FAMILY / APC10 FAMILY
AT2G20000

Predicted

interaction prediction

two hybrid

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Synthetic Lethality

co-fractionation

Co-fractionation

interaction prediction

Co-expression

FSW = 0.1171

Unknown

HBT (HOBBIT) BINDING
AT2G27970

Predicted

Affinity Capture-Western

FSW = 0.0340

Unknown

CKS2 (CDK-SUBUNIT 2) CYCLIN-DEPENDENT PROTEIN KINASE/ CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT2G37420

Predicted

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

FSW = 0.1970

Unknown

KINESIN MOTOR PROTEIN-RELATED
AT2G48100

Predicted

Phenotypic Suppression

FSW = 0.1426

Unknown

EXONUCLEASE FAMILY PROTEIN
AT3G02320

Predicted

Affinity Capture-MS

Synthetic Lethality

FSW = 0.0972

Unknown

RNA BINDING / TRNA (GUANINE-N2-)-METHYLTRANSFERASE
AT3G05870

Predicted

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

interologs mapping

interaction prediction

FSW = 0.0776

Unknown

APC11 PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT3G09700

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

FSW = 0.0424

Unknown

DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT3G18660

Predicted

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.1705

Unknown

PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT3G21460

Predicted

Synthetic Lethality

synthetic growth defect

Synthetic Lethality

FSW = 0.1616

Unknown

ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE
AT3G22290

Predicted

synthetic growth defect

FSW = 0.2399

Unknown

UNKNOWN PROTEIN
AT3G24010

Predicted

Synthetic Lethality

FSW = 0.2064

Unknown

ING1 (INHIBITOR OF GROWTH 1) DNA BINDING / METHYLATED HISTONE RESIDUE BINDING
AT3G25900

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2130

Unknown

HMT-1 HOMOCYSTEINE S-METHYLTRANSFERASE
AT3G27110

Predicted

Synthetic Rescue

FSW = 0.0140

Unknown

PEPTIDASE M48 FAMILY PROTEIN
AT3G45240

Predicted

Phenotypic Suppression

synthetic growth defect

FSW = 0.1768

Unknown

GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1) KINASE
AT3G47290

Predicted

Phenotypic Enhancement

FSW = 0.1160

Unknown

PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
AT3G47610

Predicted

synthetic growth defect

FSW = 0.1111

Unknown

TRANSCRIPTION REGULATOR/ ZINC ION BINDING
AT3G48150

Predicted

interaction prediction

two hybrid

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

interologs mapping

Co-expression

FSW = 0.0777

Unknown

APC8 (ANAPHASE-PROMOTING COMPLEX SUBUNIT 8) BINDING
AT3G53030

Predicted

Synthetic Lethality

FSW = 0.1930

Unknown

SRPK4 (SER/ARG-RICH PROTEIN KINASE 4) KINASE/ PROTEIN KINASE
AT4G04695

Predicted

Phenotypic Enhancement

FSW = 0.1222

Unknown

CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G10130

Predicted

Phenotypic Enhancement

FSW = 0.0272

Unknown

DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT4G11920

Predicted

Affinity Capture-Western

interaction prediction

FSW = 0.0446

Unknown

CCS52A2 SIGNAL TRANSDUCER
AT4G15410

Predicted

Phenotypic Enhancement

FSW = 0.0391

Unknown

PUX5 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B PRIME GAMMA) PROTEIN BINDING
AT4G15770

Predicted

Synthetic Lethality

Co-expression

FSW = 0.0093

Unknown

RNA BINDING / PROTEIN BINDING
AT4G21490

Predicted

synthetic growth defect

FSW = 0.2518

Unknown

NDB3 NADH DEHYDROGENASE
AT4G24160

Predicted

two hybrid

two hybrid

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Reconstituted Complex

Affinity Capture-MS

FSW = 0.1066

Unknown

HYDROLASE ALPHA/BETA FOLD FAMILY PROTEIN
AT4G27130

Predicted

Synthetic Lethality

FSW = 0.2718

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT4G30870

Predicted

Affinity Capture-MS

FSW = 0.0042

Unknown

MUS81 (MMS AND UV SENSITIVE 81) ENDONUCLEASE/ NUCLEIC ACID BINDING
AT4G34370

Predicted

Phenotypic Enhancement

FSW = 0.0377

Unknown

ARI1 (ARIADNE) PROTEIN BINDING / ZINC ION BINDING
AT5G01330

Predicted

synthetic growth defect

synthetic growth defect

FSW = 0.0208

Unknown

PDC3 (PYRUVATE DECARBOXYLASE-3) CARBOXY-LYASE/ CATALYTIC/ MAGNESIUM ION BINDING / PYRUVATE DECARBOXYLASE/ THIAMIN PYROPHOSPHATE BINDING / TRANSFERASE
AT5G06600

Predicted

Phenotypic Suppression

FSW = 0.0628

Unknown

UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12) UBIQUITIN THIOLESTERASE/ UBIQUITIN-SPECIFIC PROTEASE
AT5G11500

Predicted

Synthetic Lethality

synthetic growth defect

FSW = 0.0705

Unknown

UNKNOWN PROTEIN
AT5G14060

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

synthetic growth defect

FSW = 0.1794

Unknown

CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE
AT5G16170

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

FSW = 0.1563

Unknown

UNKNOWN PROTEIN
AT5G16980

Predicted

synthetic growth defect

FSW = 0.2642

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G17860

Predicted

synthetic growth defect

Phenotypic Enhancement

FSW = 0.1176

Unknown

CAX7 (CALCIUM EXCHANGER 7) CALCIUMSODIUM ANTIPORTER/ CATIONCATION ANTIPORTER
AT5G26250

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

synthetic growth defect

FSW = 0.1085

Unknown

SUGAR TRANSPORTER PUTATIVE
AT5G45620

Predicted

synthetic growth defect

FSW = 0.2952

Unknown

26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9)
AT5G58180

Predicted

Phenotypic Enhancement

FSW = 0.0551

Unknown

ATYKT62
AT1G79820

Predicted

Phenotypic Suppression

FSW = 0.0084

Unknown

SGB1 (SUPPRESSOR OF G PROTEIN BETA1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT2G03130

Predicted

synthetic growth defect

FSW = 0.2320

Unknown

RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G24960

Predicted

synthetic growth defect

FSW = 0.2002

Unknown

UNKNOWN PROTEIN
AT2G25280

Predicted

Synthetic Lethality

FSW = 0.0797

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S MEDIATOR OF ERBB2-DRIVEN CELL MOTILITY (MEMO) RELATED (INTERPROIPR002737) HAS 742 BLAST HITS TO 742 PROTEINS IN 323 SPECIES ARCHAE - 138 BACTERIA - 240 METAZOA - 132 FUNGI - 82 PLANTS - 26 VIRUSES - 0 OTHER EUKARYOTES - 124 (SOURCE NCBI BLINK)
AT2G30800

Predicted

synthetic growth defect

FSW = 0.0659

Unknown

HVT1 (HELICASE IN VASCULAR TISSUE AND TAPETUM) ATP BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G37925

Predicted

synthetic growth defect

FSW = 0.0492

Unknown

COPT4 COPPER ION TRANSMEMBRANE TRANSPORTER/ HIGH AFFINITY COPPER ION TRANSMEMBRANE TRANSPORTER
AT3G05960

Predicted

Synthetic Lethality

FSW = 0.0179

Unknown

STP6 (SUGAR TRANSPORTER 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G06460

Predicted

synthetic growth defect

FSW = 0.0288

Unknown

GNS1/SUR4 MEMBRANE FAMILY PROTEIN
AT3G06470

Predicted

synthetic growth defect

Phenotypic Enhancement

FSW = 0.0685

Unknown

GNS1/SUR4 MEMBRANE FAMILY PROTEIN
AT3G06483

Predicted

Affinity Capture-Western

FSW = 0.1552

Unknown

PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE
AT3G18860

Predicted

Synthetic Lethality

FSW = 0.0180

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G45190

Predicted

synthetic growth defect

FSW = 0.0195

Unknown

SIT4 PHOSPHATASE-ASSOCIATED FAMILY PROTEIN
AT3G60860

Predicted

synthetic growth defect

FSW = 0.0129

Unknown

GUANINE NUCLEOTIDE EXCHANGE FAMILY PROTEIN
AT4G00800Predicted

Phenotypic Enhancement

FSW = 0.2278

Unknown

BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G04885

Predicted

Synthetic Lethality

FSW = 0.0098

Unknown

PCFS4 (PCF11P-SIMILAR PROTEIN 4) ZINC ION BINDING
AT4G13020

Predicted

synthetic growth defect

Phenotypic Enhancement

FSW = 0.1449

Unknown

MHK ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G19645

Predicted

Phenotypic Suppression

FSW = 0.0861

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN INTEGRAL TO MEMBRANE CONTAINS INTERPRO DOMAIN/S TRAM LAG1 AND CLN8 HOMOLOGY (INTERPROIPR006634) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G313002) HAS 401 BLAST HITS TO 401 PROTEINS IN 98 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 186 FUNGI - 102 PLANTS - 84 VIRUSES - 0 OTHER EUKARYOTES - 29 (SOURCE NCBI BLINK)
AT4G32180

Predicted

synthetic growth defect

FSW = 0.0124

Unknown

ATPANK2 (PANTOTHENATE KINASE 2) PANTOTHENATE KINASE
AT4G33950

Predicted

synthetic growth defect

FSW = 0.0161

Unknown

OST1 (OPEN STOMATA 1) CALCIUM-DEPENDENT PROTEIN SERINE/THREONINE KINASE/ KINASE/ PROTEIN KINASE
AT4G36050

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

FSW = 0.1687

Unknown

ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN
AT4G36070

Predicted

Phenotypic Enhancement

FSW = 0.0505

Unknown

CPK18 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G01770

Predicted

Synthetic Rescue

Synthetic Rescue

Phenotypic Enhancement

FSW = 0.2265

Unknown

RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING
AT5G02560

Predicted

Synthetic Lethality

FSW = 0.0044

Unknown

HTA12 DNA BINDING
AT5G14070

Predicted

synthetic growth defect

FSW = 0.0207

Unknown

ROXY2 ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE
AT5G14180

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.1018

Unknown

MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1) CATALYTIC
AT5G24410

Predicted

synthetic growth defect

FSW = 0.0082

Unknown

GLUCOSAMINE/GALACTOSAMINE-6-PHOSPHATE ISOMERASE-RELATED
AT5G44830

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1947

Unknown

GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN
AT5G49930

Predicted

synthetic growth defect

FSW = 0.0481

Unknown

EMB1441 (EMBRYO DEFECTIVE 1441) NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G67540

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.1239

Unknown

GLYCOSYL HYDROLASE FAMILY PROTEIN 43
AT1G20610

Predicted

interologs mapping

FSW = 0.0241

Unknown

CYCB23 (CYCLIN B23) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT4G33270

Predicted

Synthetic Lethality

Synthetic Rescue

Affinity Capture-Western

FSW = 0.0885

Unknown

CDC201 SIGNAL TRANSDUCER
AT4G38630

Predicted

Affinity Capture-Western

FSW = 0.0065

Unknown

RPN10 (REGULATORY PARTICLE NON-ATPASE 10) PEPTIDE RECEPTOR
AT5G05560

Predicted

co-fractionation

Co-fractionation

Affinity Capture-Western

co-fractionation

Co-fractionation

FSW = 0.0915

Unknown

EMB2771 (EMBRYO DEFECTIVE 2771) UBIQUITIN-PROTEIN LIGASE
AT2G39840

Predicted

Synthetic Lethality

FSW = 0.0077

Unknown

TOPP4 PROTEIN SERINE/THREONINE PHOSPHATASE
AT5G17570

Predicted

Synthetic Rescue

Synthetic Rescue

FSW = 0.0058

Unknown

TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT2G27960

Predicted

Affinity Capture-Western

FSW = 0.0296

Unknown

CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1) CYCLIN-DEPENDENT PROTEIN KINASE/ PROTEIN BINDING
AT4G33260

Predicted

in vivo

in vitro

in vitro

in vivo

FSW = 0.0525

Unknown

CDC202 SIGNAL TRANSDUCER
AT2G33560

Predicted

in vivo

FSW = 0.0870

Unknown

SPINDLE CHECKPOINT PROTEIN-RELATED
AT5G39770

Predicted

interaction prediction

FSW = 0.0032

Unknown

DNA BINDING / ENDONUCLEASE/ NUCLEASE/ NUCLEIC ACID BINDING / PROTEIN BINDING
AT1G07710

Predicted

Gene fusion method

FSW = 0.0060

Unknown

ANKYRIN REPEAT FAMILY PROTEIN

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454